AMCG00007895


Basic Information

Item Value
gene id AMCG00007895
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36527365 ~ 36534128 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007895
AGGAgagaagaaacaataaaaacatacaaagctTTCCAACAGATCCCTTTGTAGACCGCTCTATTGACTGCAGACCTTCCGACTTTAATACCGCTTTGCACCAGAGAGTTGAGACGCCAGCGGGGCAATAGCCAAGGTAATTCCAGAGAAGTAATTGTTCAGTTTGCCAAGAAGTCAGCATGGCCCTCCTCAGTCTGCCCATGTTGGGGCCGATCACAGTCAGCGAGAGCTTGATCGCCATGGTGACGCTCTGCGTGGTCTACCTGTTCCTCCGCCTCCTGCGCAAAGAGATCCCCGCAGGGCTGCGCCGCCCCCCCGGCCCCAAACCGCTCCCCATCATTGGCAATGTGATGGAGCTGCTAGAAAACCCCCATCTGACCTTGACGAAGATGAGCGAGAGCTATGGCGATGTAATGCAGATCCAAATCGGGATGCGCCCGGTAGTGGTATTGAGTGGCCAGGAGACAGTGCGCCAGGCGCTCATCAAGCAAGGCGATGACTTCTCCGGCAGGCCCGACCTCTACAGCTTCAAATTCATCAATGACGGCAAGAGCCTGGCCTTCAGCACAGACCAGGCCGGGGTGTGGCGCGCCCGGCGCAAGCTGGCCATGAACGCCCTGCGCTCCTTCTCCATGATCGAGAGCAGCAGCACCAATTACTCGTGTGTCCTGGAGGAGCACATCTGCAAAGAGGGTGATTACCTGGTACAGCAGCTTGGCAAGGTGATGGAGACCAGCGGCAGCTTCGACCCCTTCCGCTACGTCGTGGTGTCCGTGGCCAACGTCATCTGCGGCATGTGCTTCGGCCGCCGTTACAGCCATGACCACCAGGAGCTGCTGCAACTGGTCAACCTGAGCGACGAGTTCGGGCGGGTGGTCGGCAGCGGCAACCCGGCCGATTTCATCCCCTTCCTTCGCTTCCTGCCCAACCGGACAATGCGTGTCTTCCTAGACATCAATAGCCGATTCAACGCCTTCGTGCAGAAGATTGTCAACGAGCATTACAACACCTTCGACAAGAGCAACATTCGTGACATCACCGACTCGCTGATTGACCACTGCCAGGACAAAAAAGTGGATGAGAACGCCAATGTTCAAGTCTCTGATGAGAAAATTGTTGGGATTGTGAACGACCTCTTTGGTGCTGGCTTTGACACCATTAGCACTGCCCTCTCCTGGTCTCTTGTGTACTTGGTTGTCCATCCTGACATCCAGAAAAAGATCCAAAATGAACTTGATGAGAATGTGGACATGGAACTTGGTCCCAGGATATCTGACAAACCCAACCTACCTTACCTGGAAGCCTTTATTCTGGAGATCTTTCGTCACTCCTCTTTTTTGCCCTTCACCATCCCTCACAGCACCACTAAAGACACCGCCCTCAATGGTTTCTTCATTCCTAAGGATACCTGCATTTTCGTTAACCAGTGGCAGGTTAACCATGACCCGAAAATGTGGAAGGAGCCCAACACCTTCAACCCAGAGCGCTTCCTGAATGATGACGGTAGAAGCGTTAACAAGATAGAGGCAGAGAAAGTAATGGTGTTCGGTCTGGGCAAGCGGCGGTGCCTTGGGGAATCCATCGGACGCACCGAGGTCTTCCTTTTCCTTGCCATTCTCTTGCACAAGCTGACGATCCACACCCTGCCCGGCCACGAGCTGGACATGACACCAGAGTATGGGCTGACGATGAAGCACAAGCGCTGCCACCTGCGTGCCACCTTGAGAAATCGCACCCAAGAGTGAACCACAAGGAGTTTGACAAGGAGTTGGCCCAGTGGGCAGCTTAGTTCCCTTGCTTTCACTGCACTTGCAGAGTCTAGTGTCTGTGGCCTCTTTTCGCTGCTCCAGAGCAGTGCTTTATGTTGGCTGTCTGAGGAGGTTGATATATTTAGCTACTCAGGAAGAGTTGTCTTTCTGCATCTTGAAATAGGCCAGGAAAGAGGACTTGGTAGATTTTAGTCTGTCTTGTCCTGCATTTTCTACTTTGTATGAGACTcttccagtccagtccagtccaaacCCATGACAAGAATATGGTGTCGGTTAATTCAATGTAAATAGACTGGTTTccaacattttaaaccattaaagGAATTACATTGACAATCATAATTTCAGTACAGGTTCTGAaaggttttgtttatgttgtgcAGAATGGCAGGGATTCTATGAGAACAAGGAGATCAGTTCAGTAAAGTTCAGTCATTGTTACCTAGTGGTTCACTTTTGCCAGGTTTGGTCAAACATTGTACAGCAGTTGAGCTGAAGCCTGAttattaaactttaaatgtttaaaggttTAAAGGATAAAAATGTGGTTGAAAACACTGTATATTTGTTCTGCATTGAGTGAATTGTATCCCAGAATGTGATGTATActtctgtatttaaaagcacactAACTGGAGTGGTTTTCCTATTCCTCCATAATTCTGTACCAGTAGTTAAGATATTTTGGGATAAGGGACTGTGAATTATGCCTTATAAACCACATTACCACTAATTATTgaatatttttcttccatttagaATTATTCAACAGTACTTATGTTCTTTGTATTTAATATgcctattttgttatgcattaatgaaggattaaaaacaaagattgtTAGTTTTGCAATTAAACTTACATTAAGGAGAAACTTAAAAGCTATATTTTTCCCTCTGTGTATATCAAGTTGTCTCCACAGATGTGTATTTATGAAGATTGCAACCTACAATGACATACTGCTtattaatatagttttaaaaaacatttaatctctatgagataataaaatatattaaatataaacgTTGTCTCCTGTCACTTGTTTGGGTATTGATTCTGCTAGAAGAGTTCCAGCACCAAGAAAAGATGGGTCTTTTTTCCCAGATACTGTAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0005506 iron ion binding molecular_function
GO:0070330 aromatase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07408 CYP1A1; cytochrome P450 family 1 subfamily A1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007895 True 2889 mRNA 0.47 7 36527365 36534128

Neighbor

gene id symbol gene type direction distance location
AMCG00007896 NA coding upstream 37919 36484986 ~ 36489446 (+)
AMCG00007892 NA coding upstream 101584 36404668 ~ 36425781 (+)
AMCG00007888 NA coding upstream 233176 36284983 ~ 36294189 (+)
AMCG00007884 NA coding upstream 507681 36017687 ~ 36019684 (+)
AMCG00007881 NA coding upstream 595877 35860631 ~ 35931488 (+)
AMCG00007894 LOC106562351,LOC107554933 coding downstream 6455 36540583 ~ 36569423 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding downstream 88925 36623053 ~ 36644439 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding downstream 110781 36644909 ~ 36646509 (+)
AMCG00007899 LOC106587555,LOC106562349 coding downstream 166677 36700805 ~ 36711387 (+)
AMCG00007902 NA coding downstream 183626 36717754 ~ 36718515 (+)
G27187 NA non-coding upstream 97434 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 136545 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 220488 36305974 ~ 36306877 (+)
G27111 NA non-coding upstream 344643 36102296 ~ 36182722 (+)
G27108 NA non-coding upstream 497032 36029458 ~ 36030333 (+)
G27216 NA non-coding downstream 151182 36685310 ~ 36727117 (+)
G27253 NA non-coding downstream 233525 36767653 ~ 36767939 (+)
G27263 NA non-coding downstream 309853 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 422054 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 558521 37092649 ~ 37093330 (+)
AMCG00007889 NA other upstream 224524 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 906564 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2732424 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5086987 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6707813 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 669742 37203870 ~ 37216558 (+)
G27518 NA other downstream 1610856 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1634442 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1821801 38355929 ~ 38423155 (+)
G27551 NA other downstream 1897917 38432045 ~ 38436595 (+)

Expression


Co-expression Network