AMCG00007896


Basic Information

Item Value
gene id AMCG00007896
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36484986 ~ 36489446 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007896
ATGAGTGGTGTGGACGTGTGTGCTGGCTCTCCGTGTGAACAGCAGTGCACTGATAACTTTGGCAGGGTGGTATGTACCTGTTACCCGGGATATCGTTTCGACAGGGAACGTCATCGTAACCACCAGCACCCATACTGCATCGACGTGGACGAGTGTGCGGACTCCAATGGCACAGTCTGTGAGCAGGACTGTGAGAACACCGTGGGCAGCTACCTGTGTCACTGCCGCAGCGGACACATCCTTAACACCGACCGGAGATCCTGCTCCCCTCTACACAACCTCAGCTCCACTGGCAAGTCGGACACCCTGATGAGTGCGGGCACCTGTTCCCTCACCTGCCAGGACTTCAGCAGCATGAAGCAGAGCCTTCTGCAGCTGAAGCAGAGGATGCTGTCCCTCAGTCTGGCCAATGACAGTGACAAGCCCTCCAATGTGTGGGGTGGGAAAGGGCCTGATATCCCAGCCCTGCCTGGCCCTCCTGGTCCTCCTGGCTCCCCAGGCATCCCAGCTGATTCAGTCTCATCTACCTTTTCCCTTCTGCCCTCTCTTTCTCGGTGCCAGGAGTCCAAGGAGATCCAGGGCATAAAGGGGAGGCTGGAGCCAGGGGGCTGCCTGGCCCTCAGGGGCCTCGTGGGGACATGGGCCCCATGGGACCTGCCCCTGACCTGGACCACATCAAGAGGGGGCGAAGGGGACCCATGGGTCCACCAGGAGCACCTGGAAGACATGGCCAGAAGGGTGAAAGGGGCTTACCTGGACCAAGAGGCCCTGCATGTTCATCAAAACACTTCTGACTTCTCCACCATCGTGCTGATTTCATTTTTCCACATCATGGTCTTCCAGGGTCCTCCAGGCTCCTTTGATTTCCTCCTACTGATGATGGCGGACATCCGCAATGACATCATCGAGCTGCAGCAGAGGGTGTTTGGGAAGAAGAGGGGCATCACACTGGAGTCAGCACCTCCTTCCTACAATGAAGAGGAGTTCAGCGAGTGGGGATCAGGTCTAGATATGTTGTCACTCAACACCTGA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007896 True 1032 mRNA 0.57 9 36484986 36489446

Neighbor

gene id symbol gene type direction distance location
AMCG00007892 NA coding upstream 59205 36404668 ~ 36425781 (+)
AMCG00007888 NA coding upstream 190797 36284983 ~ 36294189 (+)
AMCG00007884 NA coding upstream 465302 36017687 ~ 36019684 (+)
AMCG00007881 NA coding upstream 553498 35860631 ~ 35931488 (+)
AMCG00007878 si:dkeyp-59c12.1,LOC106561194,LOC108431221,LOC107690407,LOC107549016,LOC107715600,LOC107693031 coding upstream 669919 35811726 ~ 35815067 (+)
AMCG00007895 NA coding downstream 37919 36527365 ~ 36534128 (+)
AMCG00007894 LOC106562351,LOC107554933 coding downstream 51137 36540583 ~ 36569423 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding downstream 133607 36623053 ~ 36644439 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding downstream 155463 36644909 ~ 36646509 (+)
AMCG00007899 LOC106587555,LOC106562349 coding downstream 211359 36700805 ~ 36711387 (+)
G27187 NA non-coding upstream 55055 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 94166 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 178109 36305974 ~ 36306877 (+)
G27111 NA non-coding upstream 302264 36102296 ~ 36182722 (+)
G27108 NA non-coding upstream 454653 36029458 ~ 36030333 (+)
G27216 NA non-coding downstream 195864 36685310 ~ 36727117 (+)
G27253 NA non-coding downstream 278207 36767653 ~ 36767939 (+)
G27263 NA non-coding downstream 354535 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 466736 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 603203 37092649 ~ 37093330 (+)
AMCG00007889 NA other upstream 182145 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 864185 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2690045 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5044608 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6665434 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 714424 37203870 ~ 37216558 (+)
G27518 NA other downstream 1655538 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1679124 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1866483 38355929 ~ 38423155 (+)
G27551 NA other downstream 1942599 38432045 ~ 38436595 (+)

Expression


Co-expression Network