AMCG00007901 (LOC107712968)


Basic Information

Item Value
gene id AMCG00007901
gene name LOC107712968
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36730321 ~ 36743469 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007901
CATAAACAGAGCAGTGCTGCAGTAGCTGTTTAATGGAAAGTCATTTATTGAAACAGATATCATTTTAAGTCCAATGTGCATGTATACATTAGTTAAATCTGATGATACATATAGATGAGGATACAAGCTACATACATGAGAATGTTTTGCaatattaatatactgtagCATCGTATTTTCAAGTTGAAAGCTGGCGCTAACATAGTCTCGTCAACTTGatgtcattgtgtttatttccgCGTTACCAGCAATCGGTAGTCAGACTGCTAGTTTAACTAAAGACACTGCTATAGAagtcagtgttgtttttcttgtgggATCACGAAAATTgaccttatttatatatttacaaagggGCTATATAGATAAGTAAAGGGTGCTTGCACGTTTCATTCAATCTGAGGAAATCGGGCCTCACTGACATGGAATAAAGCTCCAGCCTTTCCTAACCGAATCCGCTTCACTGGCCGTCTCCCTCCTGCATGTTGTGATCGACGGTATGGCTGCTAGTTTCGGCCCCCCGAAGCTCGACAATTTCATCCTTACCGAGAAGCTGGGCAGCGGCACCTACGCCACGGTATACAAAGCCTACAGGAAGAAGGACAGTCGGGAGGTGGTGGCAGTGAAGGTGGTGGGGAAGAAGAGTCTGAACAAGGCTTCCATGGAGAACCTTCTGACGGAGATCGAGATCCTGAAGACTGTGCGCCATCCCCATATTGTGCATCTCAAAGATTTCCAGTGGGACAGCGAGAACATCTACCTGATCATGGAATGGTGCTCTGGGGGCGACCTGTCCCGGTTCATCCGCAGCCGGCGCCTCTTGTCTGAGAGAGTGGCCCGCAGCTTCCTGCAGCATCTGGCATCTGCTCTGCAGTTTCTCCATGAGAAGAACATCTCTCACCTTGACCTGAAGCCTCAGAACATCCTGCTGAGTAACGGGGTCCTCAAACTGGCAGAGATGGTGTGCAGGCGGCAGTACGATGCCCGGGTGGACCTGTGGTCAGTGGGGGTCATTCTCTATGAGGCCCTGTTTGGACGTCCTCCCTTTGCCTCTCGGTCATACGCTGAGCTGGAAGAGAAGATACGCAGTGCACGGCCCATCGAGCTGCCTCCTGGGGCTCGGGTGACCCATGACTGCCGAGACCTGCTGCTCAAGCTGCTAGAGAGGGACCCTGAGAGCCGCATCTCCTTCACAGATTTCTTCCGGCATTCCTTTGTAGATCTAGAACACATGCCCAGTGCGGAGAGTCTGGGAAAAGCTACCCAGCTAGTGATGAAGGCAGTGCAGAAGGACCAAAGTGGGGATCACTCGGCCGCTCTTTCTTTCTACTGCAGTTCTCTGGAGCACTTTGTGCCTGCTATTCACTATGAGACTGACTGCCAGCGGAAAGAAGCCCTGAGACTGAAGGTGAAGCAGTATGTTTCCAGAGCAGAGGAGCTAAAAGCCCTGTTGAAATCTGACAACAAAATCATCTTCGAAGAAGCCAAATCAGCCAgggacattttaaaagAAATGTCTCGGGATCATCTCAGGCTGTTTGCGGCACTAGAAGTGGCGTCTGCTGCTGTAGCCAAGGAAGAACAAGGGGATGAGAGTGTGGACACGCTGGATCTGTACCAGCAGAGCCTGGGAGAGCTGCTGCTCGTACTGGCAGCAGAGCCTCAAGGCAGGAGGAGAGAACTGCTGCACGGAGAGATTAAAAGCTTGATGAACAGAGCTGAATATCTTAAAGAGCAGCTGAAGatgAGGGAAACCCAGACTGAGGCTTCAATGGATGGGGAGCCCCTGTCAGAGTCAGTGAGGAGCTATCTCCAGCTCCAACATCTGAGCCTCACTGCCTTCCAGCTTCACAGCTTCGTTCAGAAGGTCACAGTGTTTCCCAGCTGTGCAGCCGTCTCATAA

Function

NR:

description
PREDICTED: serine/threonine-protein kinase ULK3-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K21358 ULK3; serine/threonine-protein kinase ULK3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007901 True 1903 mRNA 0.50 16 36730321 36743469

Neighbor

gene id symbol gene type direction distance location
AMCG00007893 NA coding downstream 264886 36431147 ~ 36465435 (-)
AMCG00007890 LOC108439026 coding downstream 416178 36307564 ~ 36314143 (-)
AMCG00007891 NA coding downstream 423949 36304406 ~ 36306372 (-)
AMCG00007887 NA coding downstream 462515 36179909 ~ 36267806 (-)
AMCG00007885 NA coding downstream 587678 36122270 ~ 36142643 (-)
AMCG00007908 NA coding upstream 126662 36870131 ~ 36879680 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding upstream 141911 36885380 ~ 36900670 (-)
AMCG00007910 gdf5 coding upstream 193358 36936827 ~ 36941868 (-)
AMCG00007915 NA coding upstream 245194 36988663 ~ 36992974 (-)
AMCG00007916 NA coding upstream 269835 37013304 ~ 37023811 (-)
G27197 NA non-coding downstream 238475 36491196 ~ 36491846 (-)
G27196 NA non-coding downstream 261869 36468086 ~ 36468452 (-)
G27173 NA non-coding downstream 365866 36362471 ~ 36364455 (-)
G27123 NA non-coding downstream 581045 36102306 ~ 36149276 (-)
G27109 NA non-coding downstream 700009 36029469 ~ 36030312 (-)
G27243 NA non-coding upstream 599 36744068 ~ 36745866 (-)
G27252 NA non-coding upstream 16876 36760345 ~ 36760589 (-)
G27254 NA non-coding upstream 24184 36767653 ~ 36767939 (-)
G27302 NA non-coding upstream 223658 36967127 ~ 36969756 (-)
G27335 NA non-coding upstream 349180 37092649 ~ 37093300 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 719326 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 1860514 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 4914170 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5387529 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 5483672 31192010 ~ 31246649 (-)
AMCG00007907 NA other upstream 99006 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 496615 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 751442 37494911 ~ 37499392 (-)
G27437 NA other upstream 824148 37567617 ~ 37569284 (-)
G27439 NA other upstream 827488 37570957 ~ 37571488 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012559 ulk3 coding NC_007129.7 CM002902.2 5618368 ~ 5641730 (+)
grasscarp (Ctenopharyngodon idella) CI01000166_00134367_00138114 ULK3 coding CI01000166 null 133599 ~ 138244 (-)