AMCG00007902


Basic Information

Item Value
gene id AMCG00007902
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36717754 ~ 36718515 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007902
ATGAAACCCTGGTGCAGCGCCTTGGCGCTCTTGGGCTGGATATTAGTGACGCTTGATGCCCAGTATGTTTGCTGGCAAGCCCTGCTCAGGTGCCAGCAGGAGAAAGACTGTGAACTGGCATACAATCAGTATCTGTCTGCCTGCGAAGCCAACATCAAAACCAATAGACGGCAGTGTCCCAGTCACTGCATCAATGCCCTGATAAGGCTCAACCAGACCCGCAATGGACCGGATCTTGAGACGTGTGACTGTGGCCAGGACGCGCAGTGCCGGAGGGCAAAGAGAGCCATCGAGCCCTGTCTGCCCAGGAGGTACCCCGGCGATGCATCGGGGATCGGCTGCACAGAAGCCCGCCAGCGCTGCGAGGAGGAGCCGGGCTGCCACTCCACGCTGACAGCCTACCTGTCCAACTGTGGACAACTTTTCAACGGGAGGAAGTGCACGATGAAGTGCAGAAACACTATCCAGCAAATGCTGTACATCCCCAACGGGATCCTCCTCAACCGCTGCGTGTGCGACGGCGTGGAGAGGCCCTTCTGCGAGGTGGTCAAGGAGAACATGGGGAAGCTGTGCTCCACGGGTGACCACGGTGTCTCGGCGTCCTACGGGGACACGGACGATGTGTACGAGGATGAGGATTACGAGCTCAAGGTGGACAGAGAGGAGACCGATTCGGAAACAGGAACGTCTTTCTCCAGCTGCTCACAGTTACTTTCTTCTTTCCCTCTACAACTAacactgttactgttactgttactttGA

Function

GO: NA

KEGG:

id description
ko05200 Pathways in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007902 True 762 mRNA 0.57 1 36717754 36718515

Neighbor

gene id symbol gene type direction distance location
AMCG00007899 LOC106587555,LOC106562349 coding upstream 6367 36700805 ~ 36711387 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding upstream 71245 36644909 ~ 36646509 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding upstream 73315 36623053 ~ 36644439 (+)
AMCG00007894 LOC106562351,LOC107554933 coding upstream 148331 36540583 ~ 36569423 (+)
AMCG00007895 NA coding upstream 183626 36527365 ~ 36534128 (+)
AMCG00007900 tarsl2,LOC106587557 coding downstream 25469 36743984 ~ 36755828 (+)
AMCG00007905 NA coding downstream 53097 36771612 ~ 36791738 (+)
AMCG00007903 mmp24,LOC107723920,LOC107666082,LOC107587563,LOC107696473 coding downstream 97135 36815650 ~ 36841835 (+)
AMCG00007906 eif6,if6,LOC107723919 coding downstream 129039 36847554 ~ 36855323 (+)
AMCG00007904 NA coding downstream 137113 36855628 ~ 36865482 (+)
G27187 NA non-coding upstream 287823 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 326934 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 410877 36305974 ~ 36306877 (+)
G27111 NA non-coding upstream 535032 36102296 ~ 36182722 (+)
G27108 NA non-coding upstream 687421 36029458 ~ 36030333 (+)
G27253 NA non-coding downstream 49138 36767653 ~ 36767939 (+)
G27263 NA non-coding downstream 125466 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 237667 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 374134 37092649 ~ 37093330 (+)
G27400 blcap,bc10 non-coding downstream 776644 37495159 ~ 37499385 (+)
AMCG00007889 NA other upstream 414913 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1096953 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2922813 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5277376 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6898202 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 485355 37203870 ~ 37216558 (+)
G27518 NA other downstream 1426469 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1450055 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1637414 38355929 ~ 38423155 (+)
G27551 NA other downstream 1713530 38432045 ~ 38436595 (+)

Expression


Co-expression Network