AMCG00007904



Basic Information


Item Value
gene id AMCG00007904
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36855628 ~ 36865482 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00007904
TTTAGctcagaaacgtgtcctgtgatAGATACAGACCCAGACACACAGATGCAATGTAACAGTTAACCGCCCCTGTGCGAGGGGTGACGTCAGCGCCGCGGCTCGCAGGGAGGCGGCTGTGCGGACTGACCAGCAGCCAGACTGGGAACCAGCGACGCAGCAGCGCAACATGGGCAACGCGCAGCCGACCATCGTGGAGTATCCTGACTTTGATGTCGTTGCTGACATTAAGGCGATCCGCAAAGCCTGCAAAGGGCTGGGCACCGATGAGGAGGCCATTATCGAGATCTTGGCAAACCGCTCTTGTTTCCAGCGGCTGCAGATTAAGCAGGCGTACTTTGACAAGTACGACGATGAGCTGGTGGAGGTGCTGAAGAAGGAGCTGTCGGGCAGCTTTGAGAAAGCGGTCATTGCCATGCTGGACTCGCCCGTCGTCTTCGCTGCCAAGGAGCTGAGGAGGGCCATGAAGGGCGCTGGCACGGACGAGGACGTGCTGGTGGAGATTCTCTGCACCCGAACCAATGAGGAGCTAAGAGCTGTGAAGGAGGCCTACCAAGAGTTGTTCGAGCGCGACCTAGAGGAGGACATTGAGGGTGACACCAGTGGCGACGTGAGGAACCTGCTCATCACCCTCTTGCAGGCTGACCGGGATGAAGGCTATGAAGTGAACGAGGAGCAGGCTGTAGAAGATGCCACTGAGCTGTTTGAGGCAGGAGAGGGCCGCTTTGGCACAGATGAGTCAACCTTCAGCTTCATTCTGGCCAAGAGGAACTACCTGCAGCTGCAGGCCACCTTCAAGGTGTACGAGCAGCTCTCGGGGACGGACATCAAGGATGCCATTAAGAATGAAGCTTCAGGAACCCTAAGAGACTGCTACATGACTCTGGTCAGGTGTGCCAAGAACCTGCAGCTGTACTACGCACGCCGCCTGAACAGTGCCATGAAGGGGGCGGGCACCGACGAAGACACGCTGATCCGCATCATCGTGGGCCGCTCCGAGATCGACCTGGAGACCATTAAGGACATGTACTCGGAGAAGTACGACGTGCCGCTGAGGGACGCTCTGTGCTCGGAGTGCGGCGGCGACTTCAAGAGGCTCCTGCTGCAGATCCTGCACTGAACCACAGCGCCTCCCCCTGATCAAGCCTCTAAAGTGCAGGGGGATTTTTAACAATCAAAGCCAGTGTAACTGTTAGCCAGCATGCATACGTCTTATGTAACCCTGTTTTATATGCAATTCCATCTCGCATGACACCCATCTCTAACCCATCATTAACACAGAAGTCCTGACTGTGTGCAGACATTTGAATCCGATGCAAAAATCCTTTGGGTTCTGAAAAACTAGCTCTTTTCAGTGCGTTCAAATCTAACAAAGGAAGCAGGAAGGGAAACTCGTTAAGCAGCAAGAGCAATATCCCAGAGAATCATCCTGCATTTGCCATCTGCATTCCTGTTAGTGTTACTTATTTTTACTATGGGGACCAGAACCACAACATCCtgagatttttcattttctaaacgTGTACTTCATGCTGAAATCATTAATGTCGTCATACCCTGATCCTCGACTGCTGCTTTCTCCGACAAATCACCACATTGCAACGGGGAAGAGGGAAAGCTCATAATCACTACATtgcaaacaaaatctaaaatgaataaaaaaactattctgAAAAGCTTTAATTACGAACATCTCTCCAGCTTTTATACAGCATCTATCTGAAGCACTCATTGGCATTTTATACAACCCTGTCGGCAGAAAGCAGATGAGCTTCAGAAGACGACATGAATCCGTCATAACTTTTGTAACCGGTGCAGTTCTGTTTCCGCACAGAGCCTCCAGTTGTCTGGGTCAGGAATATGATGGACAGGGAGCACAACACTTCAGTAAAGATCAAATCAATAAGGGACCAGCTGTCAATTGTAGTGTGTTCAGACATCATCTTTCtactaaacaaaacactgaacaaaCCGTGATTGTGTGGCTCATTCTTTTCACTGAAAAAATTGTCTGCTTTATGGTCGTtgactgctgttgtttttgttgttttcagttcagcAGCGTCCTCAGTTCTGCTTAgacagtgtatttttattggTTATAGCTCAAATCCAGAGCAAGGAAATATTTGGATGTATGTTAAATCTCATATGTAATACCTGTTTTCCAGACTGCTCGCTCAGCTGCTCTCAGTAGGGGGCGGTCAGTCTCGGTCACATTGTCTCCTTCGGCCTCAGTGAGCATCTAGGACTGACTGTGCAGTGACAGGACAGTCTGATACTCAACCTCTACCTGTAGTGTACTGCTCTCTACAAGGCCAGGCCACTGACAgagaaacaatgcattaataatatagatgtgtattcatttataaagATTTAATATATGCAGCTCTGTACAACTGACATCTCTTTCACACACTTCCTGTAAAATACCAGAGCCCCACCTGTCCTCCCAGTGCCTCCACAGTGGGATTATCTAGGGGGAAGGCTTCACACTAACCCTactaataatgtattcatttcacCTGCACACGAGCTGTAGTGTGAGAATAAAGTTTTGAGTCCATATGACTGACGCCTACacattgtgttttaagtgtGTGCTCCTTCtggattttaa

Function


GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17099 ANXA13; annexin A13

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00007904 True 2623 mRNA 0.49 11 36855628 36865482

Neighbor


gene id symbol gene type direction distance location
AMCG00007906 eif6,if6,LOC107723919 coding upstream 305 36847554 ~ 36855323 (+)
AMCG00007903 mmp24,LOC107723920,LOC107666082,LOC107587563,LOC107696473 coding upstream 13793 36815650 ~ 36841835 (+)
AMCG00007905 NA coding upstream 63890 36771612 ~ 36791738 (+)
AMCG00007900 tarsl2,LOC106587557 coding upstream 99800 36743984 ~ 36755828 (+)
AMCG00007902 NA coding upstream 137113 36717754 ~ 36718515 (+)
AMCG00007912 NA coding downstream 63571 36929053 ~ 36939598 (+)
AMCG00007909 NA coding downstream 91177 36956659 ~ 36969735 (+)
AMCG00007914 NA coding downstream 157930 37023412 ~ 37034789 (+)
AMCG00007917 NA coding downstream 175000 37040482 ~ 37052197 (+)
AMCG00007913 NA coding downstream 191354 37056836 ~ 37071433 (+)
G27263 NA non-coding upstream 10104 36843981 ~ 36845524 (+)
G27253 NA non-coding upstream 87689 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 128511 36685310 ~ 36727117 (+)
G27187 NA non-coding upstream 425697 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 464808 36329420 ~ 36390820 (+)
G27300 NA non-coding downstream 90700 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 227167 37092649 ~ 37093330 (+)
G27400 blcap,bc10 non-coding downstream 629677 37495159 ~ 37499385 (+)
G27462 NA non-coding downstream 911583 37777065 ~ 37777462 (+)
G27489 NA non-coding downstream 1151386 38016868 ~ 38017144 (+)
AMCG00007889 NA other upstream 552787 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1234827 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 3060687 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5415250 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 7036076 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 338388 37203870 ~ 37216558 (+)
G27518 NA other downstream 1279502 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1303088 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1490447 38355929 ~ 38423155 (+)
G27551 NA other downstream 1566563 38432045 ~ 38436595 (+)

Expression



Co-expression Network