AMCG00007905


Basic Information

Item Value
gene id AMCG00007905
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36771612 ~ 36791738 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007905
CCGTTATACGCACTGTTCTTGTGTTCCTAGGCAATATGGCGGCTTGGGATCATTCTAGAGCTTCTATATCTATGATCTTTTCATTCTAGAGCTCTGGTTTCCTCCGAATACACGTCACACCGGAAGGAGCGTTTGGATTGCTGGCGGGAGCTTGTGGGttgtgtgtacatttgtgtCATCATAATCGGCCCAGTTATTACTGCACAATTACCCGGCTAAGCAAAGGTAGGCTATGTGATATTAGAATGTAAACACCACGTCGATATTGTGATGAGTGTAATATATTCGTTTGTTATCTCTGTAACTAAAGCGATAAGTGGGATAAACATTGAGTTACACATCACACTGATCCGGTTACTGTACCAGTGGGCTCAAATCTACATCACTTTACAAAGAACacactttgcaaaaaaaaaaacacacgtgTTCTGTGCTTTATGCAATGTTCGCACACTTCACAGTCACTAGAGTGCTTGTAAtatcttgattttgtttttgctcgGGCATCCAGAGGAGGGTGGACAATGGAGGAGAAGATCGTGTCTCTATCCGGGGGGGAGAGTGTGCGAGAGCTGCAGCAGTGTCTGCGGGCTGTTAAAGACAGCGAGCTCGGCGCACTGATCACTCGTAGCGCAGTGAAGGGAAAGAACATAGGACCTCTCATCAGAGCCATCTTTAAAGGCTCTCCCACCACGGAGGCTGAGGGAGTGAGCCGGAGACTGCTCCTGTACAAGCACTGCATCCGGCTGTGTGAGTCCGGGGATCTGCAGCTGGAGGTGGTGTCGGACATCACTGGACTGCTCATGCTGGAGACACACCAGTTGCCGGGGCCCTCTCTGGCTGAGCTGGCCTCTCTCTACGTAGATGCCATCAAAGGTGGCAGTATCAGCAATGGCAAGTCTTTGGAGCTCTTCCCCAATATCCTCACTGCACTGGCTGCCACTGAGAGTCTGGCCTATGGCAAAGGCGAACTGAGCGGTGAAGAGTACAAGAAGCAGCTAATCAACAGTCTTTGCTCCAGCAGAGATGTGCCTGTGTCCGTGGAGGAGCTGCAGTTTGTAGTAGAGAAGGTTCTAAGGATGTTCCCCAAGCTGGACCTTCAGGAAATCCCTCCACTGGTCTACCAGCTCCTGCTGCTATCTGCCAAGGGCTGTAAGAAGCTTGTCCTGGAGGGCATCACTTCTTACTTTAATGAACAGGACCAGCAACAGAGAGAGGAGCAGAAGGACACAGAGAGCATGGACGTGGAAGTGGTGTCCGTCCCTCAGGACCAGCTGCGGCACGTGGAGGGCACGGTCATCCTACACATCGTCTTTGCTATCAGGCTGGACCATGAGCTGGGCAGGGAGCTCCTGAAGTACCTCAAGGCAGGGCAACAGGGGGAGGTGGGGCGAGTGCTCTGTCCATTCAGTATAGCCCTGCTGCTGTCGGTGGCCCGAATCCAGCGCTATGAAGAGCAGGCGTTCGACTTCCTCAAGGTGGCGATAGTGAAGAGCTTCCGGGACGTACAGGTTCAGCAGGGCTCCCGCTTCGTACAGGACCTGCTGACTCGGCGGCCGTGCGTCTCCCAGATGATCCTAGAAACCGTCAAGAACAGtgtgttcGGCTGGGACCACGTAACGCAAGGGCTGGTGCAGCTGGGCTTCATCCTGATGGACTCCTTCGGCCTGAAGCCTGGGCCTTTTGGGAAGGCAGCTGAGGCTCCCCCTGCCAACCCAAAGACGCCCTCTCAACACGCCTGCCAGCTAGGGGGCCGTATTCTTCTAGAGAGCTTCAAGATGCACGAGCCTATCAGAACCGAGATTCTGGAGCAAGTCTTGAACAGGGTGGTCACGAAGGTCGCCTCGCCGGTCTCCCACTTCATAGACTTGTTTTCCGATATCATTGCGTCAGCACCGATGATTCTCCTCGAGTCCTCCTCCAAAGTGATGGAAACCTTTGACCACCTGGCCTACCTGCCTCTCAACACTGTGCATGGGCTTCTGAGGGCAGTGCagCCCTTACTGAAGGTCAGCATGTCCATGAAAGACTCTTTAATTATAGTTCTGAGGAAAGCAATGTTTTCCAGtcaGCTTGATGCTCGCAAGTCTGCTGTGGCTGGTTTCCTCCTGCTGCTGAAGAATTTCAAGGTTCTGGGCAGCCTGGCCTCCAGCCAAGCTAGTCAGATTATATCTTCCAGCCAGATCCAGGTGGACGTTCACTCGCGCTACAACTCCGCTGCCAACGAGGCTTTCTGCCTGGAAATCCTGGGCAGCCTGCGGCGCTGTCTGAGCCAGCAGGCGGATGTGCGGCTCATGTTGTACGAGCTGAGGCGTTACTATGAGCCGGAGCAGGACCTGCTCCCCCCACTGAAGCTGGAGAGCTGTATCAGCGCACAGGGAGACCAGATCTTCTTACAGGAGCCTCTGGCCCACTTGCTGAGCTGCACAGTCCACTGCCTTTTGTGGTACCAGGACCTTCATGACCACAGGCGCACAACTGttgaggaggatgaggatgaggaggaggaggaggacgaagGGGGGTTCCAGAAGGATCTGGAGGTTCTTCTGCGGTCTGTCACTTGCCGCATGATCAAGAGTGACCTAGAGGACTTTGAGCTGGACAAATCAGCAGATTTTTCCCTTTCATCCAGTGTGGGAATCAAGAACACTATCTACGCTGTTCTGGTAATGGGAGTGTGCGAGGTTCTCATGGAGTATAACTTCCTCTCAGCCAACTACAGTAAGAACCGCTTTGAGGAGCTTCTTGACCTGTTTAATCGCTACCACAAGCTGTCTGAGATCCTGAAGGAGAAGTCTGGGAAGGGCAAAGACAGTACTCAGAGCCGAGAGGAGAGCCTGGCTGTGCTGCGCTCCAGTACCGAGTTCCTGCGCTACTCTGTCAGCACCGCCCTGCAAAAGATCCAGCAGCTGGAGGAGATGGGCCAGACAGACGGGCCTGAGGGTCAGAACACAGACAAGACCTTCCGCTACCTCTGTGACATCACAAGGGTCCTGCTTTGGAGGTACATGTCAATTCCGTCCACTGTGGAGGACTCTGGGAAGAAGGAGAAAGGGAAGACCATCTCCATGCTGTGTCTGGAAGGGCTGCTGAGGATCTTCAGCACAGTCCAGCTCCGCTATCCCAGCAAGGCCTCCCAGTTCCTGTGTGCAGTTGATGTCTCTGAGGAAGAAGACAGTGAGACCGACAACGCCAATGTGACTGAGAAAACGGCCTTCTACATTCGCCAGTTTCAGAGGTCCCTGCTGAACCAGCTGAGTGGAGGAGATGAGGATTTCCACAGTAAAGAAGCCCAGCTGCTGCTAAACATCCTGTCTGTGCTGTCACGGCAACTGGAGCCTACCTCCCCACAGTTTGTTCAGATGATTTCATGGACTGTTAAAATCTGCAAGGAGAGCAGTTTAGAGGATGTACAGTTCTGTAAGGGGTTGCTGTCCCTGCTGTTCAGTCTCCATGTCCTCTACAAGAGCCCAGTGAGTGTCCTGAGGGAACTCTGCCAGGACATCCACAGTCAGCTGGGAGATATTGACCAGGACGTTGAAGTGGAAAAGCAGTCTCATTTTGCCATCATCAACACCAAGACGGCAGCACCTACTGCCACTGTTGGGAGAGTCCTGGAGGAGGTGGAATGGCTGATCTCCAAGAAAAAGGGTCAACTCAGTTCAGAGAGGCCTGCAGCAGGCATGGACTCTCAGCGGGCAGCAGGGCAGCACGACGCTCTGGAGAAGGCCATAATCCTGCAGCTGGGAACCCTGCTGACTGCCCTGCATGAGCTGGTCCAGACCGCCCTGCCGCCCGGGGGCTGTGTGGACACCCTGCTGAAGGAGCTGGCCAGCACCTACACCATTCTCACGTCCCTGTGCAAATACTACATACAGCTCTGTGCCAGCCTGCATGGTCAGCTCTCTCCCAGGTTTGAAAAGCTGgtgAAACTGTCTGGATCCCACCTGACTCCACAGTGCTACTCCTTCCTCACGTATGTGCAGAGTGAGGAGCTGAGTGCCGCTGGGGgggacaagaagaagaagaaagaggaggCCACTACCGCTGCCTCGGCCAAAGCCTTGCGGGAGTCGAAAGCCATTCCCAACCTGATCTTCAGTATCGAGCAGTACGAGAAATTTCTCATTCTTCTCTCCAAGAAATCGAAGGTGAACCTGATGCAGTACATGAAGCTCAGCACGTCACGTGACTTCCGCATCAACGCCGCCAGCCTGGAGGCCGCGCTTCAGGAGCAGCAGGAGAGCCAGAGCCAGCAGACTGAAGTTTCTACCGAAGTTGAGGAGAGCCAGGAACccaagaagaaaaagaggaaaaagtgAGCCAGCCACCCTCTCCATCACTTCCAACCGTGACTATAATTTAGCAGTAAAATTAGTGTTTCTAAGAATAATTTCACCACAATTCTTATTTTCTGAAGatgaataatgtattcttcCATGTGGCGGATAAAAGCAACCAGAGTGCTGACTTACGAACAGTGTTGGTCTTCTGAACTCGGGCTCTGGTCGAATGAAGCTCCAGATTTATGTTGTTAGTGCTGGGGGTTTGACTGCAGGCTTTGCTGAACCAAGGAAGAAATGTTTCGATAATGAAAATGATAGAggatagtttttgttttgtttttttaatctttgctCAGTCCTCAAATATACACTTTAGATATCTGATGATGTGAGCCTTTGTTTTTGTGGCACTCAGTTGCTCACACTTCAGATGAGTCCAGGTAGTGACCCTGACTCCCTGCAGCTGCTTGCCTTTAGCCATGCAGCCTTTAGTGAGCTCAATCAGCAGATAAATATCCAGAGCTTCACCTGACAGAAGAAATAGAAGTAATTGGATTAAAACTGCTTCAAATTATATCAAATCCTTACATTTGCTCAACAGCTTTGGCAGTGTAAACTATTTCCcaggttttaatttttgtttgaatttgttCTCTccatttttactgtttttatcaGATTGGTTCTCCCTGTGTAGTGCTTGTGTATAAGTTGCAAAAAATTGTCATTATCAACAAGTCTATATTTCTCTTCACTAAGGATGTCAGGAATTGATTGAAGTTTTGAAGGTAGATAAACCAGCAGGACATAGACACTGTTAACAGTCGGTGCTTAATGCAATAAGGCTGCACGGGTTCAGTTATGTCAACCATAAGATTGTTAAATGTTTCACAAGTGCTTTTTTCATCTTACTGTTACAGGGTATTCAAACTATTTTTCGAACGCttgctggaaaacaaatattatgttGCAAGACAATTAGCTTTTactttataacaaaacaaagtaaaagctAATTGTCTTTCAACCTAAGTACATTTTTCTgtcatataaatattttctttatttgtacaAATCCTTCTCACATTAAATGTCTGAATCAGTTACACCAGCACtgctattttaattgtatttattgataggGTAGCCTTCTTCAGTTATTATTGAACACAATCctgcaaatcaatatttgtatttggacaACCGATACATGAACATTTGTGCTTCACACCTACTTTTAGTATCGCTTGCCATGCTgtcatatactgtacatgtaaaACTTTGTCTGCAATTCTTACTCTGTCCACATGTTGGAGACAAACACCACAAATGAGATGAATGCTCTTCGTTCaggaattaatcaattaatttgatGTGGACGGGTCTCAGTGAGTCACAGGTCCAGCAaccttaattacatttaattatacttaattGGGGGCttattatcatatatattatgatgtaacaaatacaataatgagtGCTGTACTAAAACCTGCTAGATGAGAGCATATATTTTACCAtgctacacaacactacactttATCATATATTACCATGTTTCAACCATGGTACACTGCAAGTACTGTTTTTATCGCTAATTGCTGTCAAATTGTTAGAGTAAAAGCTGACCTTTATATTGATATGgagagaaattataataaatactgttaCAGTGCACTCTGACA

Function

GO: NA

KEGG:

id description
K10895 FANCI; fanconi anemia group I protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007905 True 5980 mRNA 0.49 35 36771612 36791738

Neighbor

gene id symbol gene type direction distance location
AMCG00007900 tarsl2,LOC106587557 coding upstream 15784 36743984 ~ 36755828 (+)
AMCG00007902 NA coding upstream 53097 36717754 ~ 36718515 (+)
AMCG00007899 LOC106587555,LOC106562349 coding upstream 60225 36700805 ~ 36711387 (+)
AMCG00007898 csk,LOC107089925,LOC106573028 coding upstream 125103 36644909 ~ 36646509 (+)
AMCG00007897 csk,LOC107089925,LOC108264088,LOC103138042 coding upstream 127173 36623053 ~ 36644439 (+)
AMCG00007903 mmp24,LOC107723920,LOC107666082,LOC107587563,LOC107696473 coding downstream 23912 36815650 ~ 36841835 (+)
AMCG00007906 eif6,if6,LOC107723919 coding downstream 55816 36847554 ~ 36855323 (+)
AMCG00007904 NA coding downstream 63890 36855628 ~ 36865482 (+)
AMCG00007912 NA coding downstream 137315 36929053 ~ 36939598 (+)
AMCG00007909 NA coding downstream 164921 36956659 ~ 36969735 (+)
G27253 NA non-coding upstream 3673 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 44495 36685310 ~ 36727117 (+)
G27187 NA non-coding upstream 341681 36429406 ~ 36429931 (+)
G27154 NA non-coding upstream 380792 36329420 ~ 36390820 (+)
G27139 NA non-coding upstream 464735 36305974 ~ 36306877 (+)
G27263 NA non-coding downstream 52243 36843981 ~ 36845524 (+)
G27300 NA non-coding downstream 164444 36956182 ~ 36956454 (+)
G27334 NA non-coding downstream 300911 37092649 ~ 37093330 (+)
G27400 blcap,bc10 non-coding downstream 703421 37495159 ~ 37499385 (+)
G27462 NA non-coding downstream 985327 37777065 ~ 37777462 (+)
AMCG00007889 NA other upstream 468771 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1150811 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 2976671 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5331234 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 6952060 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 412132 37203870 ~ 37216558 (+)
G27518 NA other downstream 1353246 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1376832 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1564191 38355929 ~ 38423155 (+)
G27551 NA other downstream 1640307 38432045 ~ 38436595 (+)

Expression


Co-expression Network