AMCG00007908


Basic Information

Item Value
gene id AMCG00007908
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36870131 ~ 36879680 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007908
GGTGCGGCACTAACAGCGCACCCGCCCGCTGTGCGCCTCACCGCGGTGCTCTGTGTTCACCGTGTAACAGCAGCGCGCCGGCTCGGACCCAGTCACCACGACATGATCCATTCGGACGCCCTGCGACCGGCCTCGAACCCGGGGCGGAAGCCGCTGGGGAAGCTGGCCGCCCGGGTGGAGGAGGTGAAGAACCCGTGGCGCCAGGGCTCCACTCTGGAGCTGAGCCACAGCGAGGCGGCCCGGCTGGCCACGGACGCGCTGCTGGAGGCCGGGGAGAAGGAGTACCACCGCGTCCTGTCGGAGGAGAGggagctgtccttcctgtccgCCGCGGAGATCGCCTACATCACCCAGAACTGCTCCAAGAGCAGCATGGCCGACGGCTGCGCCAACGGCTCGGACAGGGACTCCTACGTGGAGGGGGACACTGTGTCGGAGCTCACCTCCGGGACGTACTTCCCCATGATGTCCGACGAGGATCCGCCTGTGCTGGAGCTGGGCTGGCCCGAGCCGCAGTCCCGATACGGCCCCTCCGAGACGCAGATCTACTTCCAGAGAGACAAGTCGCACAACGTGAAGGACCTGATCCGCTCCCTCATTAGCAAATCCAGGCGGGTCATTGCGTTGGTAATGGATCTCTTCACCGATGTCGACCTGTTCTGTGACCTGATGGAAGCCTCGAACAAGCGCAAGGTTCCAGTGTACATCCTGCTGGATGAGAAGAACCTGAAGTATTTCCTCGATATGTGCAGCGCCCTGGAAATTCGCAACACACACCTCGGTAACATGCGAATCCGTAGTGTCTGTGGAGACACTTACTGCACCAAGTCTGGAAAGAAGTTTACAGGGCAGGTTCAGGAGAAGTTTCTGATTATAGACTGTCAGGATGTGATCGCTGGCTCTTACAGCTTCACCTGGCTGTCCTCGCAGGTGCACAGCAACATGGTGTTGCACTTCTCTGGCAAGATAGCGGAGAGCTTTGACCACGAGTTCCGGTGTCTCTACGCGGACTCCCAGATCATTGACCGTTTCCACAACCCTGATGAGGAGGGACTTGCCCACTACTCCTTTGGTCCGCCGGCCCCCCACTGGGCTGTGAGCCATAACCAGGAGCGCCAGCACGAGCAGGAGCGTGTGTGCTCGGACAACTCCAGCACCCTTTCCAACAACAGCATCTCCAGCATCAAGAAGTCGCCAGGTATGCCCACCCCCACCTACAAAGTGAACTATGATACGAAGGAGCCAAACAACAGCTACCCCAGGGGGCAAAGCCAGCTGTCGCATACCCAGAGTAGCTTGGGCAAGAAGGGTTCCCACAATGGCCACATGCCCACTGTGGACTGGTCCCACTTGGGCGCTAATTCCACATCTGGTGCAGAGTGGTCCAAATCTGGAACCCCTGATGTCATGTCCAGGAACATGGCTTTGTCCTCCAAGATGCAGGGTCTGGGCCTGTTTGAGTCTAAGCCCAACTTCACACACATGTCCAAGAGCCCTCCACAGCTGGAATCCGGTTTGGCTGGGAAGCAGAAGAGCTCCGCCACTCCTCTCCTCAGCAAGATCTCCGATTTCTTCTCCCCCTCTGCTAAGGACAGAGATGCTGGGGCATTTCAGAAGTCTCCCCCTCACAGCATGGCCTTCGGGGGGCCGGACCTGTCCCAGACTGAGCCGGAGTGCAGGCCCCCGCAGCCCCCTGCACCCATTGCTGTGGAGTTGCATCCCAAGGACAGGCAGCTGGTCCGCAGCGATGAGAAGAGGATGACGCTGGGACACAGCAAGCTGGACCTGGTTAACCATTACAACAAGATGAAGTCCAAGCAGGTGTACAGCAGGTTTgagctgaaaaacaacaatggcaacaacaactgagCAGCACTGGGCAGAGTCCAGCGAACCCAGCAGCAGCGGAGGGCAGAGGGCTGCACAGCGACGGGCCAAGCAGACAGGAGCTGTCAGCTGTAACCGCACCTTTCTCCTGACCTTCCTTTCTTCTGTTCTCATGGTCGTCAGCTCCTAGGTGTGGCTACAGTGAAGATGCTTACAATGAAGGGACtcttaattttctttctgtaaatgCCCATAGAGGGAATCCAGACAGTTTCTTTTCTATAGATGTTACCATTGTGTTGtaagttattttattgtgcaGAAACACCTGTCAgcataatacatacaaaaattaaatgtatatgcttAACAGACTGAACCAGAAGGAATGTAATAACGTCCCTCAGGTAACATTTTACCTCTTATTTGTACTCGTCTGTTTTATGTAGAACAGGTGGCCAACTGCCTCAGATCAGCTCCCACTTTGTTGCTGTGGATGTGCTCCCAGACCGCACAGAGTCAGAGCACATGCGTGTGTCGAGAGATGCttcatgttttagtttgtttaacaTGCAATCCCATAGATACCACATGATGGACTTCGCAAAGCATTCACTCAATTGTCGGACACATGCTATATTGTATAGGTATTTAAGGGAAagttctgtgtatttattcagttttatctGAACTTAACATTTCTTGGAGAAAAAATGTAAGAGTCTACCAAAGTCTGTACAGGGATGCAGAGCAGTGGAAGGTGGGTTTCTAGTGGGAGTATTCTGTGCTGTAGATGTATATAAATCTAAGgggttggaaaaaaaatacatgaatgtttgtgtgtttacaaaataagtgcactgtaaaatatgtaatgcaacGGAATTATATTGTTTGTGAGGTGTCGGTTTTCAGTGTTGTATGATCTGTGATTTATCTACTGTAGCTTTaggtccccccccccccgatttACTGGGTTACCCTGTCCTTCTCAGTACCTCACCTTGGTTTACAGTGAAGTATTTATTGGTAGCGTGTCTTTCCATAATGCTGTAACCAGGACAGGTCACTGGATGCCGTGGCGCTACATGCATCCTCTACGGTTGGCCTTGAATTCAACTGCCTGTTGTCTGAGCACCACGATTGTCTACTTTTCCCTCTAGGAATTGTAGGCATAGACCTTTATAGGACTGAGTCTGTAAAGTGGAGGGGACACCAGTCTACATGTTgctaacatttttattaaaaagtgcatttcttTGGTTTTAGAAATTGTGATGCTACATTTTCAAGCAGCTTTGTTGTTTGCAACATTATCAGATGAGTTTAGATtttgtagaagaaaaaatacataatagaaTAATTTGATCATGTGACTACCTGCTTCTTGTGACTAAACTTCCTATTTAGGTTCATTATCATGTGTATATGctctaattataataaacaattatataataatgaaaaatattgatatgAAATCTGTAATgcatatattcaatatttaattattaatgtaattggCTACCCATAAACATTCTGGCTACATTCTCTACAAAATGTAGACTGGTGTCTCCTGAAAGTAGAAGCAACAGGTTTCATTCTGCATTatctaataaaatgtacattggtGTCCCTTCAGCTTTAGGGTTGAAACTGAATTCAGAAACCGCTTGGCTGTGTTCCTGGGTGTCCTGACAGTGTTTGATCTGATGTCACTGCTAGATTGTTTTAAGGAATGGAAACCTCTTGATTTAATCCTTCACAACTGGTCTCTCTTAATGTGAATTTTCTACCAAAGGATCAAGCAATGTAAACATAATGATAagagaatttgtattttgttaatgctttcttttgtattagttttttcatttttctaaacattacaaataacaaCCATGACAGAAAATGCATATCGGAAAATTGTGGAAGAAGTATTTGATGACAGTGTTACCAAAAAATAAACGTGTCAACTAAAAGAGAACCTTGTAATCTTTTGTGATTCAAGTACAACCCAATTCATCAGGGTTATGTCGATTGCGCTTCCCCTCCCAGCTGGAGAACTGCATTCCAGAATGTGTGTAAAGTTTTAAAAGAATAACGTGTTCtaaatgtgtacatgttttgatgtgtatttttttctgtgtagcACGTGTATTTGTGGGACCATACAGAGCAGTGCTCTACAATTTGAG

Function

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007908 True 4025 mRNA 0.48 4 36870131 36879680

Neighbor

gene id symbol gene type direction distance location
AMCG00007901 LOC107712968 coding downstream 126662 36730321 ~ 36743469 (-)
AMCG00007893 NA coding downstream 404696 36431147 ~ 36465435 (-)
AMCG00007890 LOC108439026 coding downstream 555988 36307564 ~ 36314143 (-)
AMCG00007891 NA coding downstream 563759 36304406 ~ 36306372 (-)
AMCG00007887 NA coding downstream 602325 36179909 ~ 36267806 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding upstream 5700 36885380 ~ 36900670 (-)
AMCG00007910 gdf5 coding upstream 57147 36936827 ~ 36941868 (-)
AMCG00007915 NA coding upstream 108983 36988663 ~ 36992974 (-)
AMCG00007916 NA coding upstream 133624 37013304 ~ 37023811 (-)
AMCG00007920 NA coding upstream 258547 37138227 ~ 37141287 (-)
G27254 NA non-coding downstream 102192 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 109542 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 124265 36744068 ~ 36745866 (-)
G27197 NA non-coding downstream 378285 36491196 ~ 36491846 (-)
G27196 NA non-coding downstream 401679 36468086 ~ 36468452 (-)
G27302 NA non-coding upstream 87447 36967127 ~ 36969756 (-)
G27335 NA non-coding upstream 212969 37092649 ~ 37093300 (-)
G27435 NA non-coding upstream 687089 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 687523 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 690579 37570259 ~ 37570881 (-)
AMCG00007907 NA other downstream 23548 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 859136 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2000324 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5053980 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5527339 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 360404 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 615231 37494911 ~ 37499392 (-)
G27437 NA other upstream 687937 37567617 ~ 37569284 (-)
G27439 NA other upstream 691277 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 693354 37573034 ~ 37588525 (-)

Expression


Co-expression Network