AMCG00007911 (LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058)


Basic Information

Item Value
gene id AMCG00007911
gene name LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36885380 ~ 36900670 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007911
CGCGGTGGGACGGGTTCCTTTGACATTGCAGGAGGCGGGGACACAGTGTTACAAAACGTGCATATTTTaatcttacatttaaaatagttactTTAAGCgttggttttccttttctttttccctcttGTACGACTTTTCCGATCCGGTAAGATGTACCGGCGAGCGGCGCAGTGTGCCCTGAGGAGCGGCGCGACTCTTTCAGCCTCCGGGACGGCTATGAAGAGACGGGAGGCGGGAGCCTGTATCTCCAGAGCCCTGGTCATGTGCTCAAGGACAGGGCTGCCCTCCAGCTCGCCATCACAGAGCAGAGCTCTACACTCCACCAGAGAGCTGTTCACAGTAAAAGAAACACCACAGGCGTCCGAGGAAGAAGTGGGAGCCTTCACCAGACTAATAGAAGCCATGGGATTCACAGGACCCCTCAAATATAACAAATGGAAAATTAAGATCGCAGCACTGCGCATGTACACCTGCTGCGTGGAGAGGATCAACTACGACGACTTTTTTGAAAAGTGCTCCCTCCCAGACACACTCAACTCCTGGTTCCTGGTGGCCCAGCTACACGTCTGGATGTGCCTGGTGCGGATGAGGCAGGAGGGCCGTGCGGGGAAGTACATGTGTCGATACATCGTGCACTCCATGTGGGAGGACGTGGAGCAACGCGGGAAAATCATGGGGATTAATTCCTTTGCCTTGAAGGAAAGCATGAGGGCCATGACGGAGAATTTCTATGCTGCTATTTTTGGGTACGATGAGGGGATCCTGTCCGATGATCGAGTGCTGGCCGCCTCGCTGTGGAGGAATCTCTTCAACCAGCAGTGCGAGGACCCGCAGCAGCTGGAGCTCATGGTGGCGTATGTCCGCAAGCAGaTGCAGTACATCGACTCCCTGGATGGAGAGGACCTGCTGCTGACTGGTGAGGTGAAATGGCGCCCCCTGGTGGAAGAGAACGCACAGAGCATCCTGAAGCCTGTCTCTCCGACCTACAATGATGCTGGCTTGTGatccctgccccccccaggCAGTGTGCAGCTCTGTAGACAGTATAGACCACAGAGACCCACTTACCTTCACTCCTACTTAAACCCCTGCCCCCTCCACTCATGACGAGCAGGGAAAGTCATTCTGAGAGAACCCTGAGAAAGTCCGTGGGTTTATTTGTGGacatttgcacatttgtttCTGAAACGAGggattttacttttgaaaagaTGCTGTAATGTACACCTACCATACTTGCACACTCGTAGGGATGCAGTGGACGCCCTCTGgtgcacattttgtttgcacACTTATTTTTCTGTGCTTCTAAGTGTTTTCTGGGACGTGCAACACCGTCTCGAGGTGAATGGATCTTCTTTTTATGGTAacgaataaaatattttgtaaaagtatAAATACTATTTCACTGACAGTAAATTCTGCTTTGTTTCACGTGGAGCTGAAGGTGCTTCCTCAAGCAGTTCCAGGGAAAACGTATCGGTTGAATTGAACGAATGATCCAGCGATGATGTCATGTGGCTCGGTGGCAGGTGAATAGTGTGAAAGCTGGAGTGCGCAGTGTTCCAGCCTGTGCGGAGCCGGGGTCAGCGGGGGTGCGTGGTGTTGGGTTACGGCACAGTGCTTCCAAGAGCAAGACTGCAGCGTTCAGTGTGATCCGCAGCCGTTGATtagaaactaaatatatatatatatatatatatatatgttgtttgaACTATCCTTTTTGCAAATTTTTTACTCTTACCTCACAACTGCATCCCATGCGTGGAGGAAATCAGTTCTGCCCCAGAAGCCCTAACCCTCTGAACAACCCGAACCAACCATCACACTCGCAGAGGCCCAGTAAACACACACCAAAGTGCTTCTCCCACAGGagcttttattaaaaataactaaagaaaAACGTATTGAATAAGAATTACAAGGCCTCTAATTCAGTTACCAAAGTTTCctcaatcattttttaatataaatacaaatattttctcaaaattaaaatatttatgaatacaagccatgttttattttgattgtctgtgtgcatctgAACTGTGTAAAATCCCCCAAACGTTTCTGAAAGTTGTCAATTCAGCAAAGGCACATTTTCCTCTCTGTATCTGCGGTCAGCCCGGCTGCAGGGAGGCGATCTGCGGAGAAACCAATCAGACACTCGAACAGCCCAGTGTCCCTCTGACCTGCCTGAAACACCACAACACTGTTCTAGGATTTAGTTTTCACAGACCATAGAGTATTCATGTATTGTCCCATGGATTGATATTTGACATTGATAAGTTATTGCTGCAGGGGTTTAGTTCTGTTGGGTTGGTTGGTTTACTTGATTTgataagcttttctttttttgcaatgCACAGTACCTTCCTTCCCACCTGTGCTTATAGAATCAGTTACTGTGGAAGTGCCAAGACACTTAAACCGACCAGTACAAATTTATTTATAACTTCTTAAGTCAATAAATGTTATTGATAAGTGAGAACAGTGCATGGTTTCGCTACAGACGTTGCTTGAGTCTGGTGCTTTGTATCCTCCTGCAGGCTGAGGAGGACTGACCTGCAGGTGTATGGAGCACAGACAGAGTTTTAAGAGTTCTAGAgtaattttaaacttaaaattgcttaaaataaactgtttttcaaGTAAGTGAGTGAGCGACTCCAATGTGTTAGCCTAGATCAGGCAGCAGGGGGCTCTGTTTACTTCTATTGTTGGTAgagaattattttgttattgggATAGATGGATAGCTGcctatttgtttaatgttctcACATTATCAGTATTGTATGAAATActgtttcttgttgttctttttataatgatttaattgaagGTTTCCTAGTGGCAAATAAAGTTGTGTTCCCAGTTCGCTGTGTCCTGTGTTGTTGAgggtgtgctgctgtgtgtgcaaTCCTGAGCACTGGGGTGTCACCCTTCTGGACCGCG

Function

NR:

description
PREDICTED: ubiquinol-cytochrome-c reductase complex assembly factor 1

GO: NA

KEGG:

id description
K17662 CBP3, UQCC; cytochrome b pre-mRNA-processing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007911 True 2964 mRNA 0.46 9 36885380 36900670

Neighbor

gene id symbol gene type direction distance location
AMCG00007908 NA coding downstream 5700 36870131 ~ 36879680 (-)
AMCG00007901 LOC107712968 coding downstream 141911 36730321 ~ 36743469 (-)
AMCG00007893 NA coding downstream 419945 36431147 ~ 36465435 (-)
AMCG00007890 LOC108439026 coding downstream 571237 36307564 ~ 36314143 (-)
AMCG00007891 NA coding downstream 579008 36304406 ~ 36306372 (-)
AMCG00007910 gdf5 coding upstream 36157 36936827 ~ 36941868 (-)
AMCG00007915 NA coding upstream 87993 36988663 ~ 36992974 (-)
AMCG00007916 NA coding upstream 112634 37013304 ~ 37023811 (-)
AMCG00007920 NA coding upstream 237557 37138227 ~ 37141287 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding upstream 317100 37217770 ~ 37238928 (-)
G27254 NA non-coding downstream 117441 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 124791 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 139514 36744068 ~ 36745866 (-)
G27197 NA non-coding downstream 393534 36491196 ~ 36491846 (-)
G27196 NA non-coding downstream 416928 36468086 ~ 36468452 (-)
G27302 NA non-coding upstream 66457 36967127 ~ 36969756 (-)
G27335 NA non-coding upstream 191979 37092649 ~ 37093300 (-)
G27435 NA non-coding upstream 666099 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 666533 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 669589 37570259 ~ 37570881 (-)
AMCG00007907 NA other downstream 38797 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 874385 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2015573 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5069229 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5542588 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 339414 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 594241 37494911 ~ 37499392 (-)
G27437 NA other upstream 666947 37567617 ~ 37569284 (-)
G27439 NA other upstream 670287 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 672364 37573034 ~ 37588525 (-)

Expression


Co-expression Network