AMCG00007915


Basic Information

Item Value
gene id AMCG00007915
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36988663 ~ 36992974 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007915
CGCCATTTGCGGAGCTAAACTGAGCTCCCCCATCACATGACCGGAGCTAGCCCTCCAGATGACGTCTTCAGCGGCGGAGCACATTGCGCTCCACGTCAGAGTAACGTGCGTTGTTGCAGAGTCACTGCGAGCGCAGGCTGGAGTGTAAACAAGAGGAGGACGACTGAGCGAAAAGTCTAGAAGTGTCGCAGCTTTCAGTTTTCTTATTGTCGTCTGTTACACATTATAATCCGGCAGCACGGCCGCTCTCTGCCCAGCATGGTGTGATAGTGCACGGTTGCGGTGCTGTGGCCTTCAGTGTTGAGAGACCATTCGGGAAGAACACACGACAGACTCGGCGCTGAGCTGCGGGCTCGTCTCTGCTTGGCTGTCGCGGCGAGCGCCTGGAAAGTCCCTGGATGTCCAGGCCCGAGTCGAAAGGGACGGCGGGCTGGAGCCTGTGAGGACCGACACAGTGGCTGGTGACAGCGCCAGGCTTTGCACTATGGAGCCTGGAGTGAAGGATCGGGAGGAAGAGACCCTGCAAACGGCCTTCAAGAAGCTCCGAGTGGACGCAGAAGGCTCCACAGCAGCAGTGCGGGTCTGTGACTCTGCAGCACCGAGGCCGGCAGCAAGAGCCAGCGCAGACGGAGCAAAGCCCAAAACGGGCTGTCCCAAAGAGAACTGGCACGGgtgtatgcGGAAGACCTCTAGGGGAGCAGTGAGGAGCCAGAGACGCAGGAGATCGAAGTCCCCTATCCTGCACCCCCCCAAATTCACCTACTGCAGCTCCAAGCTGTCCCCGCCGCCCGGCCATCTGAAACACAAGAGCCAGCTCGAGCCGCAGGAGGACGGGGTGGCGCTGGGGGTCCCTGCCAAGAAGGAGCTGCTGTCATCAGTGCATTCCCCCTCCTCTCCCGTGTTCGGGGTGGCCAGTTACGAACCCTACGGCCACGAGTGTCGCGGGGGGGGCGTGGCTCCGGAGCCCAAACTCAAGCCTGTGTCCGATGAGGACAGCGAGTCCGACACCCCTGTTGCAGAGAGGAATCCTGGCGCTGCGGCTAAGCCAGAGCAAGCAGCCAGCAGCAGCGATGGGGCTGTAGGGGGCATTGCTGGTGCCTCCTCCTCTGACTTCCAGTCACTGTCCAGGCTGCACCAGGACGGGGAGGGGTCATGCCCGTGCCCTGGGGGGCAGTGCCAGTGTCGCGGCTGGCAGGGCGTGGAGGTTTACTCCTTCACTGGCCTGCGGGACGTCATCTCCGAGTGCGAGAGGAACATGGCAGGTGCGGAGGATGGCCACGCCTCGCCCCACCGCCGCACGCAGAGCAGCTCCTCGGGCTCCCCGCGCTCCTGCTCCGAACAGGCCCGTGCGTACGTAGATGACATCACTATTGAGGACCTGTCGGGATACATGGAGTACTACCTGTACATCCCCAAGAAGATGTCACACATGGCTGAGATGATGTACACTTAACTGGGCCGCAGGGGATGCTCACGCTCTCGAATGGTTAGGCATGATGTCATGGCAAACGAGGAACCCTGCGCAGGTTGAGCGGTTTCCAGTTTTCAGCAGCTTTTCTCAGTCTCCtttttttgttccttgtttgtttttattttatgagctCATTCTGTTTAATACTGGTTTACATGATAAGTTGCCAAAGCGCGCTCTCAATATGTGCAGGTTTGATTTACTGGATGTGCAAACTTGTAAAGCCaagttaaaatagtttttccaATGCCAAGCATGTCATGTGTCTTGGGAGTCTTCATTTCACTGTGTTAATTAAACTTGTTGAAATTGTTTATGCATTACAGTATAACTCGTCTTTCTCTGGCATTCTATTGGtctgattttaataaatgacaGAGTTCCAAGCCTGAAAATAGGAATTGGGGAACTGGATATTTTGGTGAATAAATTGCTTGACATGTACGAGCTGCGGTTTCCACTTGCTCACATCCTTCTTTTGTGTCCTTAGATTGTGTCCTTAACGAATGAGTTTCTGAGGTGGATTCATTACTgaatttagtgttttttttccccctcagattttttgtttgttttttaattcagattgccaatgaaaataataaccgTTATGACAAAATGCTTTCTGCTGTCTTAATTATTGTGTGAATGTCAGCTATTTTGTGACAAACTGGGGGTTCCTTTGTGAACGGAATCTGAATAAAAACAGTCTTTCTTTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007915 True 2193 mRNA 0.54 4 36988663 36992974

Neighbor

gene id symbol gene type direction distance location
AMCG00007910 gdf5 coding downstream 46795 36936827 ~ 36941868 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding downstream 87993 36885380 ~ 36900670 (-)
AMCG00007908 NA coding downstream 108983 36870131 ~ 36879680 (-)
AMCG00007901 LOC107712968 coding downstream 245194 36730321 ~ 36743469 (-)
AMCG00007893 NA coding downstream 523228 36431147 ~ 36465435 (-)
AMCG00007916 NA coding upstream 20330 37013304 ~ 37023811 (-)
AMCG00007920 NA coding upstream 145253 37138227 ~ 37141287 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding upstream 224796 37217770 ~ 37238928 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding upstream 255405 37248379 ~ 37259255 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding upstream 267592 37260566 ~ 37267059 (-)
G27302 NA non-coding downstream 18907 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 220724 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 228074 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 242797 36744068 ~ 36745866 (-)
G27197 NA non-coding downstream 496817 36491196 ~ 36491846 (-)
G27335 NA non-coding upstream 99675 37092649 ~ 37093300 (-)
G27435 NA non-coding upstream 573795 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 574229 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 577285 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 784095 37777069 ~ 37777318 (-)
AMCG00007907 NA other downstream 142080 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 977668 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2118856 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5172512 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5645871 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 247110 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 501937 37494911 ~ 37499392 (-)
G27437 NA other upstream 574643 37567617 ~ 37569284 (-)
G27439 NA other upstream 577983 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 580060 37573034 ~ 37588525 (-)

Expression


Co-expression Network