AMCG00007916


Basic Information

Item Value
gene id AMCG00007916
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37013304 ~ 37023811 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007916
GCTCTCCAGCCCGCTGACCTGTACACACCTGCGCTCACTCACCTGGGCGCGCTGCTGCACGACGGGCCGCGCCGGGCCGGCTGGGACAGGCCAGGGCTGGACCAGTCTGGGGTGACTCGGGATTCAGTGCGGCAGTACCTCCAGTTCCACCCTGACCAGACCGTGCTCATCCTACATGCCAAGGTGGCCCAGAAATCCTATGGCAATGAGAAGCGGTTCTTCTGTCCACCCCCATGTGTCTACCTCAGCGGGCCGGGCTGGAAACTCAAGCAAGAGCAGCTGAGAGCCAGTGGCCTGGGCGACTCGAGCTGCAGGATTTGTGGCTACATGGGTTTGGACAATGCAGGGGAAGCCCAGCTGGACACGCTGAAGCTGAACTTCGAGGAGCAGCCTGATTCCAAGAGGTTTGGCTGTGCAAAGGCTCTGTACATCTCTGATTCcgacaaaagaaaacacttccGGCTTGTCCTGAAGCTTTTCTTCAGCAATGGGCAGGAGATAGGCTCGTTCTACAGCAGGCTGATCAAAGTCATCTCAAAGCCGTCCCAGAAGAAGCAGTCGATGAAGAATGCAGACTTGTGTATCTCCTCGGGGTCGAAGGTGTCTCTGTTTAACCGGCTACGCTCCCAGACTGTCAGCACGCGTTACCTTTCCGTGGAGGCCGGAGCTTTTGTGGCCAGTGCCCGGCAGTGGGCGGCCTTCACCGTCACCCTGGtggAGGAGCAGCGGGCCGGGCAGGGCGAGTACCCAGTGCGCGAGGGTTACGTCTGCTACGGCTGCGCAGTCCAGCTGGTGTGCACTACCACTGGGGTGGCACTCCCCCCCATGGTGATCCGCAAGGTGAACAAGCAGTATGCCATTCTGGACGTGGACGAGCCAGTCTCCCAGCTGCACAAGTGTGCTTTCCAGCTCAAGGACAGCAATAGGATGTACCTGTGTCTGTCCAATGAGAAAATCATCCAGTTCCAGGCCTCTGGCTGCCCCAGGGAGCCCAACAAAGAGCTGCTGAATGACGGATCGTGCTGGACCATCATCGGCACGGAGACAGTGGAGTACACCTTCAGCGAGAGCCTGTCCTGTGTGCAGGCCTCCGTCACCCCCATCCCCCTCGTCAGCTCTCTGGAGCTCAATGGAGGCGGGGACGTGGCCATGCTGGAGATCCTGAGCGGATGTTGTCTGTTTGTTGACTGCAGGAGCCCCAGGTCGCTGCTGTGCGTGGTCCCAGACGTGTCAGTGTTCAGCGGCGAGTGGCGGTGGCGGCGCCGGCCGATCGCAGTGCCGCTGTCCCTGGTGCGCAGCGACGGACTGCTCTACCGCAGCTCCTTCTCCTTCACCTACACCCCCGAGCAGAGCCCGCTGGCTTGGCCCCGGACCATCTGCCAGGTCATTGCAGGCTGGGGAGACCTGCCTGAACTGGAGGTGTTGCCCTCCCTGTAA

Function

GO: NA

KEGG:

id description
K06053 RBPSUH, RBPJK; recombining binding protein suppressor of hairless

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007916 True 1437 mRNA 0.61 12 37013304 37023811

Neighbor

gene id symbol gene type direction distance location
AMCG00007915 NA coding downstream 20330 36988663 ~ 36992974 (-)
AMCG00007910 gdf5 coding downstream 71436 36936827 ~ 36941868 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding downstream 112634 36885380 ~ 36900670 (-)
AMCG00007908 NA coding downstream 133624 36870131 ~ 36879680 (-)
AMCG00007901 LOC107712968 coding downstream 269835 36730321 ~ 36743469 (-)
AMCG00007920 NA coding upstream 114416 37138227 ~ 37141287 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding upstream 193959 37217770 ~ 37238928 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding upstream 224568 37248379 ~ 37259255 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding upstream 236755 37260566 ~ 37267059 (-)
AMCG00007932 NA coding upstream 327800 37351611 ~ 37353614 (-)
G27302 NA non-coding downstream 43548 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 245365 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 252715 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 267438 36744068 ~ 36745866 (-)
G27197 NA non-coding downstream 521458 36491196 ~ 36491846 (-)
G27335 NA non-coding upstream 68838 37092649 ~ 37093300 (-)
G27435 NA non-coding upstream 542958 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 543392 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 546448 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 753258 37777069 ~ 37777318 (-)
AMCG00007907 NA other downstream 166721 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1002309 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2143497 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5197153 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5670512 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 216273 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 471100 37494911 ~ 37499392 (-)
G27437 NA other upstream 543806 37567617 ~ 37569284 (-)
G27439 NA other upstream 547146 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 549223 37573034 ~ 37588525 (-)

Expression


Co-expression Network