AMCG00007917


Basic Information

Item Value
gene id AMCG00007917
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37040482 ~ 37052197 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007917
ggcAGAGCCCCAGCAATGAACTCCTCTTGCTGCAACTCTTCTGGTCTGCCGGTTCGGGACTCCTTCAACGCGGCACTGGCCAAGAACCTCATTGTGGTTCTGCTCTGCACGGGCATTAACTACATAAACAGCTCGCTGGTGTTCACCTTCTTCCAGAGCCAGACGTTCCGTGAAAACCCACGCTACGTGCTGTTCATTCATATGGTGCTGAACGACATGATCCAGCTGTCCATCGCCGGAGCGCTGCACGTGGTGAGCTACGTCTTCTACACCATCAATGTCTCGCTGTGCTGCTTGCTCCTGATGGTGGCCATCTTCACCACGCTCAACACCCCCCTGAACTTGGCAGGCATGGCCGTGGAGCGCTACATTGCCATCTGCGACCCGCTGCGCCACTCCCAGATCTGCACCGTGCGCCGCACCTACACCCTTATCGCCCTCATCTGGGTGGGGGGGGCCTTGCCCATCCTTCCTGACCTGTTCGTGCTCCTGGCCACCGAACCTGCCTCCTTCTTCCACTCCACCATCTTGTGCAGCCGCGACTATGTATTCCGCCACCCCTACCTGCTGCAGAAGAAAAACGTCTCACACATGGTGTACCTATCCCTTGTCTGGCTCACCCTCACCTACACCTACTTCAGGATCCTGTTTGCAGCCAAGGCGGCCAGCGCGGATGCCAGGAGGGCCCGCAACACCATCCTGCTCCACGCCGCCCAGCTCCTGATGTGCATGTTCACTTACATCGGGCCCCTGCTGGACACCCTGCTCCTGGACATCTTCCCCAGCCACCTGCTGGAGATACGCTTCACCAGCTACCTGATCGTGCACATCCTGCCACGCTTCCTGAGTCCCATCATCTACGGCATGAGAGACCAGGCCTTCCGGAAACATCTAAAGCACCACCTTCTGTGTACCATCTGCCTGTCCAGGGCTCCCAGAAGAGTCTCAGTCAAAAAACATTCCGCAAACATCCCAATGAACTCCACTGCCAATCTGTCGTACCTGGCGGAGGCAGCAACTGGGCAGGAGCGGGAGACTTTTGCCACGGCCTTTGTGAAGAacctgctgctggtgctggtgtGGCTGCTGCTGAGCTACATCAACGGCAGCTTGGTGCTCACTTTCTTCAGGAGCCAGCTGTTCTACGAGGACCCGCGCTACGTCCTGTTCATCCACATGGTGGTGAACGACGCCGTGCAGCTGACGATCACTGTGACGCTGCACATCCTCAGCTACGTCTTCTACGCCATCAATGTCTCCTTCTGCTGCTTCTTCATCCTGATTGCCGTCTTCACCACCAGGAACACCCCCCTGAACCTGGCTGGCATGGCCTTGGAGCGCTACATCGCCATCTGCAATCCACTGCGCCACTCCCAGATCTGCACCGTGCGCCGTACCTACAGCCTCATCGCTCTCATCTGGGTGTTGGGGGCAGCCCCGGACATCACTGACCTATTCATCACCTTGGCCACCGAGTCCATGGCCTTCTTCCATTCCTCTGTATTGTGCCTGCGCCAAAACATTTTCAAGGACCCCAGACTGACCTACAAGCGGCAGACATTTGATGGGCTGTACTTTGCCTTCGTCTTCCTCACGCTCATCTACACCTACCTGTGCATCCTCTTCACGGCCAAGGCCATGTCCACGGAGAGGACCTCGGCCAAGAGGGCGAGGAACACCATCCTGCTGCACGGCGTCCAGCTGCTCATGTGCCTTCTGTCCTACGTTTCCCCCTCGGTGGAGCTCGTCATCCTCATTATCTTCCCCGGGCACAACCGGGAGATCCGCTACGCCACCTACCTCATCGTCTACATCCTGCCCCGCTTCCTCAGCCCCATCATCTACGGCGTCCGAGATGAGAAGTTCAGGAAGCAGCTGAGCAGGTATTTCAGGTGTGGACGCTGCAGGGTTGTGCCGGGGAGGGAGAGCCACGTTGACGGCATCCCAGCCAGGAGCAGTTTGTTTGACGGCAACCTGTCCGTGTTCGGGGGTGCAGGGGGCTTGCGGGACAGCTTCACGGTGGCTGTGGTGAAGAATGTGGCGGCCGTGCTGGTGTGGCTGCTGCTGAGCCTGACCAATGGCAGCATGGTGGCCACATTCTTGAAGCACCGGTTGTTCTACGAGGACCCGCGCTACATCCTGTTCATCTACATGGTGCTGAACGATGCCGTGCAGCTCACTCTGCTCACGGCCCTGTACGTGGTGAGCTACGCCTTCCAGAGGATCCCTGCCTCCGCCTGCTGTGTGCTGGTGCTGCTGGCCGTGCTCACCACCCGCAACACGCCCCTCATCCTGGGCGGCATGGCTGTGGAGCGTTACACTGCCATTTGCCACCCGCTGCGTTACCGACAGATCTGCACCTTGTACCGCACCCTGGCACTCGCCGCCACCATCCTGCTGCTGGGCGCAGCACCACCGCTGTCTGACCTGCTGGTCACACTGGCTGTGGAGCCGCCCAGCTTCTTCCGGGCATCTCTGTTCTGTGACCATTCACTGCTGTTCAGGGAGCCCAGCATCTATTATAAAAATTGTGCCTTCGACACCCTGTACTTCTCCTTCGTCTTCCTGACCTTGTTCTGCACCTACTTCAAGATCGTGCGCACTGCCAGGGCTGCCGCATCCACGGACTGGGCATCGGCGAGGAGGGCGAGGAACACGGTGCTGCTGCACGGCGGACAGCTCCTGCTCTGTATGCTCAATTTCGTCATGCCCTCCATGCAGGCCTTCCTGCTGATGCTCTTCCCCGGCAAGATCCTGGAGATCCGCTACGTCAACTTCCTGCTGGTGTACATCATCCCCCGCTTCCTCAGCCCCATGATCTACGGCTTCAGGGATGAGAAGTTCAGGAAGTACTGGAGCCGTCTCCTCATGTGCAGAGTCCAGGCAGTTGGGCCGGTGCACACAAACCATCAACTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007917 True 2919 mRNA 0.59 3 37040482 37052197

Neighbor

gene id symbol gene type direction distance location
AMCG00007914 NA coding upstream 5693 37023412 ~ 37034789 (+)
AMCG00007909 NA coding upstream 70747 36956659 ~ 36969735 (+)
AMCG00007912 NA coding upstream 100884 36929053 ~ 36939598 (+)
AMCG00007904 NA coding upstream 175000 36855628 ~ 36865482 (+)
AMCG00007906 eif6,if6,LOC107723919 coding upstream 185159 36847554 ~ 36855323 (+)
AMCG00007913 NA coding downstream 4639 37056836 ~ 37071433 (+)
AMCG00007918 NA coding downstream 32903 37085100 ~ 37086014 (+)
AMCG00007921 NA coding downstream 45729 37097926 ~ 37098855 (+)
AMCG00007919 NA coding downstream 61434 37113631 ~ 37117196 (+)
AMCG00007922 NA coding downstream 83470 37135667 ~ 37136216 (+)
G27300 NA non-coding upstream 84028 36956182 ~ 36956454 (+)
G27263 NA non-coding upstream 194958 36843981 ~ 36845524 (+)
G27253 NA non-coding upstream 272543 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 313365 36685310 ~ 36727117 (+)
G27187 NA non-coding upstream 610551 36429406 ~ 36429931 (+)
G27334 NA non-coding downstream 40452 37092649 ~ 37093330 (+)
G27400 blcap,bc10 non-coding downstream 442962 37495159 ~ 37499385 (+)
G27462 NA non-coding downstream 724868 37777065 ~ 37777462 (+)
G27489 NA non-coding downstream 964671 38016868 ~ 38017144 (+)
G27497 NA non-coding downstream 975183 38027380 ~ 38027923 (+)
AMCG00007889 NA other upstream 737641 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1419681 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 3245541 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 5600104 31414154 ~ 31440378 (+)
G26258 tpm1,tpma,LOC108237348 other upstream 7220930 29755040 ~ 29819552 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other downstream 151673 37203870 ~ 37216558 (+)
G27518 NA other downstream 1092787 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 1116373 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 1303732 38355929 ~ 38423155 (+)
G27551 NA other downstream 1379848 38432045 ~ 38436595 (+)

Expression


Co-expression Network