AMCG00007920


Basic Information

Item Value
gene id AMCG00007920
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37138227 ~ 37141287 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007920
ATGAACGCATCTGCAGCTCAGGTCCGGACCCAGGAAGTCTTCCACATCGCCTTTGTGAAGAACTTCACTGTGGTCCTCCTGGGCATCGTCATCAACTGCATCAATGGAGCGCTGGTCTTCTGCTTCTTCAGCAACCAGGTGTTCTACCACAACCCACGCTACATCCTGTACATCCACATGGTGATCAACGACATGATACAGCTCTCTGTTGCCATCAGTTTGCACGTCCTGACCTACATCTTCCCGGTCATGAACGTTTCCGTCTGCACTGTGCTTGTTCTCATTGCCATTTTCACCTCAATCAACACCCCCCTGAACCTGGCGGGCATGGCCGTGGAGCGCTACATCGCCATCTGCGACCCGCTGCGGCACTCCCAGATCTGCACAGTGCGCCGCACCTACACCCTCATCGCCCTCATCTGGTGTGTGGGGGCCGTCCCAGGGCTGTCTGACTTGGTCATCGTGTTGGTGACCAGACCCCTGAGTTTATTCTcctcaaatatgttttgtaacaataattatattttcaattctCCCTATCACGAAGTAAAAACTGGGGCCACTCAGGCTGTGTACATGGTCTGCGTGTGGCTGACTCTGATGTACACGTATTTACGAGTCCTGTTTGCAGCGAAGGCTGCCACTACAGATGCAGCTTCAGCCAGAAAGGCTCAAAACACAATCCTGCTGCACGGAGCCCAGCTGCTGCTCTGCATGCTGTCCTACATCTCCCCTATGGTGGACATTGCCTTGCTCTCAGTATTCCCCCAGTACCGTGGGCAAATactgtttctctctttcctcaTAACAGATATCCTACCAAGGTTTTTAAGTCCCCTGATCTATGGGGTCAGAGATGAGAAGTTtagaaaatatatgaaaacataccTGTTGTGTAGAAAGGTTACTGTAAAGAAAGTCAAAACTGAGGCCACTCATGCTGTGTACATGGTTTGCATGTGGCTGACTCTGATCTACACGTATTTACGAGTCCTGTTTGCAGCGAAGGCTGCCACTACAGATGCAGCTTCAGCCAGAAAGGCTCGAAACACAATCCTGCTGCACGGAGCCCAGCTGCTGCTCTGCATGCTGTCCTACATCTCCCCTACGGTAGACATGGCCTTGCTCTCAGTATTCCCCCAGTACCCTGGGCAAATactgtttctctctttcctcaTAACACATATCCTACCAAGGTTTTTAAGTCCCCTGATCTATGGGATCAGAGATGAGAAGTTtagaaaatacatgaaaacatacCTGTTGTGTAGAAAGGTTACTGTAAAGGTGAGACCAGCTAAAGAGCCATTTGTCAGTCTCAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007920 True 1326 mRNA 0.49 2 37138227 37141287

Neighbor

gene id symbol gene type direction distance location
AMCG00007916 NA coding downstream 114416 37013304 ~ 37023811 (-)
AMCG00007915 NA coding downstream 145253 36988663 ~ 36992974 (-)
AMCG00007910 gdf5 coding downstream 196359 36936827 ~ 36941868 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding downstream 237557 36885380 ~ 36900670 (-)
AMCG00007908 NA coding downstream 258547 36870131 ~ 36879680 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding upstream 76483 37217770 ~ 37238928 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding upstream 107092 37248379 ~ 37259255 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding upstream 119279 37260566 ~ 37267059 (-)
AMCG00007932 NA coding upstream 210324 37351611 ~ 37353614 (-)
AMCG00007933 NA coding upstream 228624 37369911 ~ 37383595 (-)
G27335 NA non-coding downstream 44927 37092649 ~ 37093300 (-)
G27302 NA non-coding downstream 168471 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 370288 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 377638 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 392361 36744068 ~ 36745866 (-)
G27435 NA non-coding upstream 425482 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 425916 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 428972 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 635782 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 875943 38017230 ~ 38017469 (-)
AMCG00007907 NA other downstream 291644 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1127232 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2268420 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5322076 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 5795435 31338716 ~ 31342792 (-)
AMCG00007929 NA other upstream 98797 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 353624 37494911 ~ 37499392 (-)
G27437 NA other upstream 426330 37567617 ~ 37569284 (-)
G27439 NA other upstream 429670 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 431747 37573034 ~ 37588525 (-)

Expression


Co-expression Network