AMCG00007932


Basic Information

Item Value
gene id AMCG00007932
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37351611 ~ 37353614 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007932
GAAAACTTTTTCATTTGGAGTAAGCCAGAGACCCAGCCAGTTCTCCagtatctctctttctctcaccacAAACACAAGGCCAGTCATGACCACAGCTGTGCAGGATAGCAGGCCGCTGCACCGGGCCGTGAGGAAGATCAAGTGTGCCTCCATGGTGAACAGCCTGGCCAGGAGCTGGCAGACCTGGGCTAGCGAACACTCAGGGAAACAGGAGTCCATCCCCAAGGGCTGGATTCCCAGCTCTCTGGATGACGAGGATGACCAGAGGAGTaagaaaacagagagaaagaacatGCCCCCCTCTGTGACTCCCAGGACGCTGGCAGAGAACGGGCCGGTCGAAAACTCCAAAATCAAATCGGTCAGCGTGACCAAGAGCATCGCCCCAAAGAAGAGCGACTGTGGCAACGACCTGGTGAGCTTCATCACCGAGAAGATTAAGACCAAGAAAATAGGTGCCGGGGACAGGAAACCCTTCCTGGGCAACGAGTCGCCCACGCGCAGACGCCACTGTGGCAACAAGGGTGGTGCAGGGGTGAAGGCCTGGGTCCAGCAGGGAAAGGAGGAGGGCTGGCTGGGGTCACGGAGCAGCAGCCTGGACACTGAGGACAGCGGCCTGGGGGAGGAGGCGGGACTCAGCGACACTGACAGCAGCTCTGAAGACAAGCACAAAGACAGCCAACAAGCCAGAGAGAAGAGACTCAAGGACCGGCCAAAGatcAAGGTGGTGACTCTGAGTGACCTGAGGAGCACCTGGCAGAAGTGGTCTGAGCAGCACTTGGAGGAGCAGAAACTGAACCCATTCAGCGAGGAGTTTGACTATGAGCACGCCATGGCCACGCGGCTGCTCAGAGGGGATGCAGGCTATGGCCGGCCCAAGGAGGGCTCGAAGACGGAAGAGCGGGCAAGGAGGGCCCAGCAGCACATCCGCCGGGAGATGGATGAGATGTGCTTCATAATCCGGGACATGGGCATGTGCGGGCAGGACGGCCAGATCCGCATGACGTTCGGAAGGCTGTTTGACCGCTACGTGAAGATCTCTGACAAGGTGGTGGGCATCCTGCTGCGCTGCCGGAAGCATGGCATGGTGGCCTTCGAGGGGGAGATGCTGTGGAAGGGCCAGGACGATGATGTCATCATCACGCTGCTGGTGTAAGCTCATGGGTCACTGGGACTCCCGGTTTGGGCCGTTCAGCTTTGCCACAGCGTGATCACGTTGCGCGTGTACTTTACGGACAGATAAACCAAGCATGCAGGGCCAGATGCTGGGAATATACAtatgaatcaaatcaaatgcacaGATATGCTGTGGAATGTCATCAGCGTTGTGTATGAATGCCTGCATAACATTTTGTATTCCCAGAGCTAGGTTGTTCCTTTAGAAGAtgtactgtaatatttatttaaggtcTTGTAGACATGCAGTTTGTCGTCTCTCTGTTGTGCTCTGTACTAGTTCACTGCTTGATGTGTCAATTTCTTTCAAAGTGAAAGCACATTAGCCTTCTTAAAGAAGGAAGACTGGTAATTTGTAAAACagtttgaactgaaatgttttatttgttctgcgTTACTTTTGAAAATTTCCAAGGTGATTTTCTAAAGAATCTTTAAAACTAAACTGTCTTAGTTTTTTGCTCCtcgtctgtatttatttatttatttatttatttatttatttat

Function

GO:

id name namespace
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:1902495 transmembrane transporter complex cellular_component

KEGG:

id description
ko04020 Calcium signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007932 True 1683 mRNA 0.52 2 37351611 37353614

Neighbor

gene id symbol gene type direction distance location
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding downstream 84552 37260566 ~ 37267059 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding downstream 92356 37248379 ~ 37259255 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding downstream 112683 37217770 ~ 37238928 (-)
AMCG00007920 NA coding downstream 210324 37138227 ~ 37141287 (-)
AMCG00007916 NA coding downstream 327800 37013304 ~ 37023811 (-)
AMCG00007933 NA coding upstream 16297 37369911 ~ 37383595 (-)
AMCG00007936 NA coding upstream 50827 37404441 ~ 37404863 (-)
AMCG00007935 NA coding upstream 70103 37423717 ~ 37438509 (-)
AMCG00007941 tmem74b,LOC102310340,LOC102787133 coding upstream 134114 37487728 ~ 37490833 (-)
AMCG00007939 NA coding upstream 147170 37500784 ~ 37519123 (-)
G27335 NA non-coding downstream 258311 37092649 ~ 37093300 (-)
G27302 NA non-coding downstream 381855 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 583672 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 591022 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 605745 36744068 ~ 36745866 (-)
G27435 NA non-coding upstream 213155 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 213589 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 216645 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 423455 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 663616 38017230 ~ 38017469 (-)
AMCG00007929 NA other downstream 108628 37240084 ~ 37242983 (-)
AMCG00007907 NA other downstream 505028 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1340616 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2481804 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5535460 31804899 ~ 31816151 (-)
G27416 blcap,bc10 other upstream 141297 37494911 ~ 37499392 (-)
G27437 NA other upstream 214003 37567617 ~ 37569284 (-)
G27439 NA other upstream 217343 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 219420 37573034 ~ 37588525 (-)
G27502 NA other upstream 732315 38085929 ~ 38091878 (-)

Expression


Co-expression Network