AMCG00007933


Basic Information

Item Value
gene id AMCG00007933
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37369911 ~ 37383595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007933
ATCATATGAGTATGTGCCCCAGGATACATTCCTCCATAACTGTTGAGCTAATCCAGTAAATGTGAtatgctttgtattattttaagagaaataatgtgttttcatagtaataataattactcaACACAAGAATAAAGCAAGTGCAGACGGTTAGCAAGCGAGTTCCAGGATTAAGCAAGTAAAAAACGAGGGCAAGGAATGACACAGGAGGTGTTTGTGGGGCATACTGTTGTTCACAGTGGTACAGTATGGAGTAAAGTAAGTTTCGATTTCTGTCCACACGCCCACGTACACATGCACGTGAAACATCATGAAGAGTTAGCTCAACAGCTGGTAAACTCGGGCTTGTCTGCTCTGTCGACACAGCTGGAGAACTACATCCAGGGCAACATCAGGACGGAGATGGTCCAAATCCAGGCCAATGCTGTCCAGAACCAGACCGCCACCATGTTGGAGATTGGCACCAACCTGCTGACCCAGACCGCAGAGCAGACCCGCAAGCTCAACGTGGTGGAGGCCCAGGTGATGAACCAAACCTCCCGCATCGAAATCCAGCTCCTGGAGAACTCTTTGTCTACGAACAAACTGGAGAAACAGCTTTTGGTGCAGGTCACTGAGATCTCCAAACTTCAGGACAAAAACAGGGCCCGCCTCACATTTGCCTTTGTGCCCCCCAGCCTGTTGGAGAACAAGGTGCTGGACATGGAGTGGAAGCACCGCTCTGAGCTGGACGACATGCGGGCGGAGAAGGAGAAGCTCCAGCAGCTGGTGGTTCGGCAGACCAACGCCATCGAGGGCCTGGAGAGACAGCTGCGCTCTGCCAGCTCTAACAGCACCCTCCTGCAGAGGCAACAGCAGCAGCTTATGGAGTCTGTGCACAGTCTCATCAGCCTGGTGTCTCTGGGTGCAGTGACCCTGAAGCAGGACGACAGGACGTTCAGAGACTGTGCGGAGGCCTACAGTGCTGGGCACAATGTCAGTGGAGTCTACACCATCCACATTGCCAACATGACAGAACCCACCAAGgtaTTCTGTGACATGGAGACCGGCGGAGGTGGATGGACGGTGTTTCAGCGCAGAGTCAATGGCAGCGTGGACTTCCAGAGGACGTGGAGAGAGTACAAAATGGGTTTCGGCAGCCCCTCTGGGGAGCACTGGTTGGGAAACGAGGCGTTGTACTTCCTCACAAGCCAGGGCTCTTACTCGCTGCGGGTCGAGCTGACGGACTGGGAGGGCAACGTGCCGTACTCGCAGTATGAGAGGTTCCAGCTGGGCAGTGAGAAGCAGCACTACAGGCTGTTCCTGAAGGGCCACAGCGGCACAGCGgggcagcagagcagcctggtgGCCCACGGCGCAAGCTTCAGCACCCGGGACTCTGACAATGACAACTGCCTGTGCAAGTGTGCGCTCATGCTGACCGGAGGGTGGTGGTTTGACGCCTGCGGTCTCTCCAATCTCAACGGCATGTACTACCCGGCCGGGCACAACATCCGGAAGCTGAACGGCATCAAGTGGCATCACTTCCGAGGGCCCAGTTACTCCCTGCGGGCCACCGCCATGATGGTCCGGCCCTCGGAGTTCTGAACAGAGGGATTGGGGGTGCCCGGCTGCAATAGCACAAGGCAACCGGCACACTGAATCAAACTAAAAAATATGAACCAGTcagactcactcactcattcactcactctctcactccgCCCTCTGTCTGGCTGCACTACCGATGGGTGCTGAAGTGAAACCAGCGACGGCAGAGCCAGCGAGAGCCTGGGGGAAGACAGGGTGATCCCACACCAACATGGCTCATCCCTAATCCCGCACCTGTGTCACTCACCACGGCTCGGAACGCACAACAGCGTCAGAACTCATTGGCTCAGCGCTGACGTTGGCTGTGCAAGTCTGCATGTACACAGGAGCATTGATGGGATGTGTGTTGCAGTAGTACAGAATTGAGCTGCAGAGCACACTGACCCGGCAGCACTGTCAAAATGACTCCCCCCTCCACTAGGAATAAAGTGGGGGAATGCTGGGTACCTGCAGTCCGCCAGGAGCCCGGGGCAACGACCTCAGCGTGACTGTTGTGAATAGACTCCCTTATCTTGTGGTATCGGCAGGACAGACCTCCTGTGACACTCATAGGCAAGCAGTTTTATGTTGTAGAGGATCCTTCCGTCCTCTGTCGTCACAGTCATGTGGTTGTTAGACACATttactttcctttaaaaataataaaagtgtgattgttatattaattattttatcagctttctttttgtattcttGTAGATTGTGTGGTTACCAGGAGGCAATGTATAGTCTAATAATCTCAGTAGCCTGATAACAACATACTACTTTCTTTGTCTTTAAATGCTTTGCCTGCTTTTGGTTGTTATAATTGGCACTGCTATGTAAGTGCGGAGATcactatattttattatctacACACATTCCCTCTGTTACTGGGAGGATGTGGATAGCTTCTTCCTCATCTGCTTTTTCTATTATCTTCAGTTCCCATGTCTTTTATAAGAGAGGTCTTTGGCCAGACCTAGCAGCTCGTGAATCGATGTACAGCACAGACAGGCTGGACAGAAGCACGATGGATGGTATTCATTTCATATAacgaaaaataattaatcacgATGgaatgctgtgtttgttttcttgtttcacTTTTAATCAGCACCGATTCAGGCTTAATTGATTTAGCATGAAGATTAACAGCAAGGAATAGCTTAAAATGGATGAATATTGTGTACAAATTACTCTGATTTTgctaatatttttacatatgtattattgtgtCAACTGTATTAAGAAGCTCTTTGCCTCTTAAATGcatcatgtattgttttgtatccCATTTATCCAATTCAAATGTTGTAATAACTGgacttttttcatatttaaaagagaaaggatgattgttaaaatgcttttaaaacataGTGTTTGTCTGCcagttgttttccttctttctaATGGCATGTGGTTGATTTACAAGCTTATGTCGAAAGTGTAATAGTTTGCAGTTATGTGAatctttatatttacattatatgttTGAGCAGTCGTGAGTTTAAAGAGCAGATGTTTATTTGTTGCTTTATATTCTGAAGTTGCACTTTATGACTTATTAAGACAtacaaaacagaagagaaagacTGATTTCTGGTGTACAGCCAACAGAGACAGCTTTTATAAAGTACAGAAGCAATAAAgacattttggttttatttttttgtattacattaatctctttttttattacttttttgaaaaataaaatgtttgatgaAGAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007933 True 3308 mRNA 0.47 8 37369911 37383595

Neighbor

gene id symbol gene type direction distance location
AMCG00007932 NA coding downstream 16297 37351611 ~ 37353614 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding downstream 102852 37260566 ~ 37267059 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding downstream 110656 37248379 ~ 37259255 (-)
AMCG00007926 stk4,LOC103371188,LOC108435692 coding downstream 130983 37217770 ~ 37238928 (-)
AMCG00007920 NA coding downstream 228624 37138227 ~ 37141287 (-)
AMCG00007936 NA coding upstream 20846 37404441 ~ 37404863 (-)
AMCG00007935 NA coding upstream 40122 37423717 ~ 37438509 (-)
AMCG00007941 tmem74b,LOC102310340,LOC102787133 coding upstream 104133 37487728 ~ 37490833 (-)
AMCG00007939 NA coding upstream 117189 37500784 ~ 37519123 (-)
AMCG00007943 LOC108442925 coding upstream 407846 37791441 ~ 37827192 (-)
G27335 NA non-coding downstream 276611 37092649 ~ 37093300 (-)
G27302 NA non-coding downstream 400155 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 601972 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 609322 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 624045 36744068 ~ 36745866 (-)
G27435 NA non-coding upstream 183174 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 183608 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 186664 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 393474 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 633635 38017230 ~ 38017469 (-)
AMCG00007929 NA other downstream 126928 37240084 ~ 37242983 (-)
AMCG00007907 NA other downstream 523328 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1358916 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2500104 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5553760 31804899 ~ 31816151 (-)
G27416 blcap,bc10 other upstream 111316 37494911 ~ 37499392 (-)
G27437 NA other upstream 184022 37567617 ~ 37569284 (-)
G27439 NA other upstream 187362 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 189439 37573034 ~ 37588525 (-)
G27502 NA other upstream 702334 38085929 ~ 38091878 (-)

Expression


Co-expression Network