AMCG00007935


Basic Information

Item Value
gene id AMCG00007935
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37423717 ~ 37438509 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007935
CTGTAATCAAGAGTACATGAGTACGTGAGTCTGATGATGTGCCGATGCGTTTCAGCCAGCAGGGATCTGTCTGAGGTCTGTAAGGGCTGTCTGGAGTGCTCTGGAGACAATGGGTGCCTGAAGTGTCCGGAGAAGCTGTTCCTATTCATCCACAGGGAGGGGATGCGGCACCACGGCTCCTGTCTGCATGCCTGTCCGGCTGGCTACTACGGCGTGCGCGGCCAGGACATTAACCGCTGCATTAaaTGCAAGACCCCAGACTGTGAGAGGTGCTTCAGCAAAGATTTCTGTATGAAATGCAAAGAAGGATTCCAGCTGTTCAAGGGAAAATGCCTGACCAGCTGCCCAGAAGGCACAATTCCCCACCTAATGGACTGCATTGAGGGCTGTGTACTGAGCGAGTGGAGTGAGTGGAGCTCTTGCAGTCACAATGGGCTGAGCTGTGGTCATCGCTGGGGGGTCCAGACCAGGAGCAGGGAGCTGTCCAGGACCGGCCCCGAGGAGCCCAGTGTCTGCCCGGCACTCAGTGAGACGCAGAACTGCCGGTTGAGAAAGAGGTGTCCCGGAGagaaaagaaagaacgaGAGGAAGAATgggaaaaagaaagggaaaagacaGCGGACGCTCCAGAGCAACTCCACGGTAACAGAACCTCCCTGGGGGACCTAAAGTGGACGGATCGGTGGGAGCCTGAAGCCAGGGGCCCGTGCAAGAGCTGGTTACTTGAATAGTGCTGGTGTACGACTTTTACAGGACGGTAACAAGGATAGACAAATCGGAAGGCATTGCTCTCTTTCATACAGACAAGGACACGGACTGTATTCCCCTGGATTTTGCAattcattgttcattgttcttTACTCCCCCTCCccaaaacagcaaaataaatgctcAATGATTCAGAAGCATGTTTAAAAAGCCCAATTAAAATCTCAACAACAGAATAAGACACACTAGGGCCAAGGAGTTAGTTGCTTTGTCTCCgtcctgtatttttttctactctttcttattcagtttttattaactatttatttattttatttttatactttgcAGACAGAATTGTAGGTGTTGCATCCTCCAGTACATCAGTCATCCTAGTTTAAAAGGTGCAGTTAGATTAATAGTTCCCTAAATTCATCACTATCTGCACAATGCCCGTTCTGACTACAAAggcagatctttttttttatttaaaagaataggaaatacataaataaactctCCCTACAGTTTTGACAGCATCTTAATACTTCAGTCTCACTTCAGCATCTTGACTCCAAAATGCCAGGGACAGACTGACATAGAAATTATTTTGGACACCCTtgtcatttctttcatttgactTTCAGTTCTGTGACTGAGAACACTGGCATTTTTACTATGATCTGAAGCATGAAAACCTgcagtattataatatatattctctaTATAAACATGGAcacatctatatctatatctacatatactgtatacaattccttaatatttttatatataataaaaaaaataaacagacatataaaacttattttattttctttgcttccAGATAAAGTATTGAGTTTAGGGTTGAAAGCTGGGCAGCAGGAGGATTTAGTGAATTACAGTGAAAGTCAGAAAGTCAGGAATCATGACTGAGGAGCTGCTTCTTCTGCTCCTGTTTGTTCAGGACTGAAAATATTCATCATTAATTGCTTTCCCGTTTAATGTGGCAAATTTAATTTGTGGCTCTGCAGTCCGGGAAGGATAGCAAGAAAACAGGCCTTCTTTTCTGTGCACAATAATTACACCGACATTACACTTCAGGATGTAGAGAGGACGCGACGTGATGATGTTTTCTTAATGTATGGAACTGAGTTGGAATTACAGCACATGTACCTGCagtatgtatattgttttatctaTTCCCACTGTAAAGGGACCGCTTTGGCGTGTCATCCCACCGCTTCAACCACAGCAGGAGAGCAGGGCTGGGCTTTGATCGGTGTCTGACCACACCCACAACCACAAGAATCTCAAAGACTCAAGGGCCAAGTCGGTACAATGTGGTACAGTCTAGTATGGTGTGGTAAAGTGTGTTATTTGGTGTGGTGTGGTACAGTGTGGCACAGTGTATCTGAAACTGCCCTATTGGACGTATATGgatttttttatagaaaatagaaaatgttatcCGGAAAAGGGTAATTAACAAACTTAAActgaatagaaaatgtaaaaataaaataaaatttgaaaaatacaaaacagtataaattatttatatttttaaaatatgcaatcCAGATAGatgtattttgatatttttaatagtAATTTTTTATCACCCTTTTTTAAGGTTTAAGGTTTTAAAGATGGAAACCAGATGTGGTATATTTGTGACTTTTTATTGTGATGATGTAGATTaaaggaatacattattttatggaGTTTTTTTGGCATTGTTTTTTAGGGTAATGTTTCACTTGTTGACATAACACACAGGAATGCATCTGTTGATTGAGATTCCTGATAAGATGATTGCTTACTTATCACAAAGCTTATCACAgtaacaacaattaaaaaatgtaccacAACAAATCTGTGAAAAAGTGGCtagaatgttttctttaaataacgTAAAAGAAATTGGGTGTGTCAAAATCCTTCCCGAGGTTCAGAGatcatttacaaattcaatatcaataaagtcagatgtgtttaaatattgcGTAAattattctgatattttattgtgtttttattgtttgtttgtttgtttgtttgttttaagcatAAACATTGTTTGGCATGTAACATGTACCgttgttcttatgtttttgcACATATACAGGGCtgctaaatgaaaaataactaaataccaGTGAAATTCCCTCCAGGATGATAAtttgaaaaggttcaggtcaaTACAGACAATGTTGTGTAGTGAGAAGACTTAGGCCATTTCACTCAGGACTGCAGAGTGGAACCAGAGCTGCAAAACTCATTATGCACACAGGAACAACACTGTTGATTGTCTACTGTGACTCCAGAAACATTTAGTTATTTCTTCTAAGTAGTGTTGCATATtcagtgtattgtatttaaagcctttaatatatagtatatggatatttttaatattgattttggatcaattattattatgaatacttTGTTTACAGCAgatctattttaaaacaaatgttacatgGTACATCATGATTGCATAATATCTGCCACGTTTGTGGTTTAAACCATACAAACCATTTATTTAACGGCAATAAACTAATTTAAGAAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007935 True 3291 mRNA 0.39 4 37423717 37438509

Neighbor

gene id symbol gene type direction distance location
AMCG00007936 NA coding downstream 18854 37404441 ~ 37404863 (-)
AMCG00007933 NA coding downstream 40122 37369911 ~ 37383595 (-)
AMCG00007932 NA coding downstream 70103 37351611 ~ 37353614 (-)
AMCG00007927 ywhaz,ywhaba,LOC105901861,LOC105906814,LOC100136192,LOC108412308 coding downstream 156658 37260566 ~ 37267059 (-)
AMCG00007928 LOC105008385,LOC108414618,LOC106566651,LOC107702880 coding downstream 164462 37248379 ~ 37259255 (-)
AMCG00007941 tmem74b,LOC102310340,LOC102787133 coding upstream 49219 37487728 ~ 37490833 (-)
AMCG00007939 NA coding upstream 62275 37500784 ~ 37519123 (-)
AMCG00007943 LOC108442925 coding upstream 352932 37791441 ~ 37827192 (-)
AMCG00007945 ptprt coding upstream 427941 37866450 ~ 37876752 (-)
AMCG00007946 LOC106565046 coding upstream 474069 37912578 ~ 37916476 (-)
G27335 NA non-coding downstream 330417 37092649 ~ 37093300 (-)
G27302 NA non-coding downstream 453961 36967127 ~ 36969756 (-)
G27254 NA non-coding downstream 655778 36767653 ~ 36767939 (-)
G27252 NA non-coding downstream 663128 36760345 ~ 36760589 (-)
G27243 NA non-coding downstream 677851 36744068 ~ 36745866 (-)
G27435 NA non-coding upstream 128260 37566769 ~ 37566983 (-)
G27436 LOC107666014 non-coding upstream 128694 37567203 ~ 37567566 (-)
G27438 NA non-coding upstream 131750 37570259 ~ 37570881 (-)
G27463 NA non-coding upstream 338560 37777069 ~ 37777318 (-)
G27491 NA non-coding upstream 578721 38017230 ~ 38017469 (-)
AMCG00007929 NA other downstream 180734 37240084 ~ 37242983 (-)
AMCG00007907 NA other downstream 577134 36842475 ~ 36846583 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 1412722 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 2553910 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 5607566 31804899 ~ 31816151 (-)
G27416 blcap,bc10 other upstream 56402 37494911 ~ 37499392 (-)
G27437 NA other upstream 129108 37567617 ~ 37569284 (-)
G27439 NA other upstream 132448 37570957 ~ 37571488 (-)
G27442 chd6 other upstream 134525 37573034 ~ 37588525 (-)
G27502 NA other upstream 647420 38085929 ~ 38091878 (-)

Expression


Co-expression Network