AMCG00007940


Basic Information

Item Value
gene id AMCG00007940
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 37496217 ~ 37501731 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007940
ATGGGTCGGTGGACTGTGGACAACgtgcccccttcccccccatCCTCTGCCTCCGCCACCACCCCTGAGGACCCAAGATCTGTCTCTCCATTTTGCATGGACTGTTTGCCCAGCTATTTCTTCATCTTCGTCCCTCCCTTGTCTCCTTTGTCTTCTGCACTTGAGGCCTGGGGGACCTCCAGACCCAGAGCCCAGCCCAGTGACACTGAGAGTGGCCTGCTGTCTCCTCACAAGATGGTGATCTCCGTGTCTGAGTTCTGCAAGGCCTCCTCCTGCAGCTCTTGGCAGATCCGGTCCATCCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007940 True 306 mRNA 0.58 4 37496217 37501731

Neighbor

gene id symbol gene type direction distance location
AMCG00007938 blcap,bc10 coding upstream 15 37495198 ~ 37496202 (+)
AMCG00007934 LOC104960738 coding upstream 15046 37469923 ~ 37481171 (+)
AMCG00007931 rims4 coding upstream 150102 37336571 ~ 37346115 (+)
AMCG00007924 NA coding upstream 249410 37244267 ~ 37246807 (+)
AMCG00007925 NA coding upstream 296393 37191982 ~ 37199824 (+)
AMCG00007937 chd6 coding downstream 52262 37553993 ~ 37574386 (+)
AMCG00007942 NA coding downstream 77337 37579068 ~ 37590574 (+)
AMCG00007949 pigu coding downstream 501219 38002950 ~ 38010795 (+)
AMCG00007950 NA coding downstream 509445 38011176 ~ 38014794 (+)
AMCG00007947 NA coding downstream 517161 38018892 ~ 38026850 (+)
G27334 NA non-coding upstream 402887 37092649 ~ 37093330 (+)
G27300 NA non-coding upstream 539763 36956182 ~ 36956454 (+)
G27263 NA non-coding upstream 650693 36843981 ~ 36845524 (+)
G27253 NA non-coding upstream 728278 36767653 ~ 36767939 (+)
G27216 NA non-coding upstream 769100 36685310 ~ 36727117 (+)
G27462 NA non-coding downstream 275334 37777065 ~ 37777462 (+)
G27489 NA non-coding downstream 515137 38016868 ~ 38017144 (+)
G27497 NA non-coding downstream 525649 38027380 ~ 38027923 (+)
G27552 NA non-coding downstream 937843 38439574 ~ 38439892 (+)
G27553 NA non-coding downstream 939805 38441536 ~ 38442071 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 279659 37203870 ~ 37216558 (+)
AMCG00007889 NA other upstream 1193376 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 1875416 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 3701276 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 6055839 31414154 ~ 31440378 (+)
G27518 NA other downstream 643253 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 666839 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 854198 38355929 ~ 38423155 (+)
G27551 NA other downstream 930314 38432045 ~ 38436595 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 1191008 38692739 ~ 38708915 (+)

Expression


Co-expression Network