AMCG00007948


Basic Information

Item Value
gene id AMCG00007948
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38080756 ~ 38086751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007948
atggacaaTGATCCTTCCATGCAGTGCAGGAGTAggaAGGACGATGCCCGGCTGCAGCTGGACAGCGCTCTGCAGGATGTGAATGACAAGTACGTGGTGCTGGAGGAGACGGAGAAGCGCGCCGTCTGCCGGGCTCTGATCGAGGAGAGGGGGCGCTTCTGCTCCTTTGTCAACATGCTGCGGCCCGTGCTGGATGAGGAGATTGGCATGCTGGGAGAGGTTACTCACCTGCAGACCATCCTGGAGGACCTGAGTAACCTGACTGCCGAGCCCAACAAGCTCCCCCCCGCCAGCGAGCAGGTGATCCTTGACCTTAAGGGATCTGACTACAGCTACTCATACCAGACACCCCCCGCCTCCCCTAGCAACACCCTGTCGCGCAAGAGTAGCATCAGCAGTAACTACCAGTCTACCTCAGTGCGGCATGTCCCCTCTCTGGACTCCATCTCCAGTGCTCGCTCGCCCAGCCCACTGCTCCCGGAGTGCTGGGAGGGCAGCCGATCTCTGAGCGAGGGAAACTCTCCCACCTCCGCCCGTGCGGGCCCGGGTCTCGGCTCGGGCCACCTCAGCCTGCGGATCAGCAAGAACACTGACCAGATGTTGGCCAACAGCCTGAAGCAGCGGTCAGTCGCCCCCCCCGCCAGTGGAGAGAACGGCCTGGCCATGCCCCCCCCAAGCCACGCCTACTCCCAGCCTGGAGAGAGAGCACGGGCCATGTCCACCTCCAGCAAGCCTCACTCGGCCCGGGAGCAGCTGGCGTTGACGCTCAGTGCTGTAAAGAAAGAGCCTCCCCTTTATGactATGACTACATCTCCCTGCATGGCGGGGATGAGTTGCACGACCAGCCGGACTTCGACAAGTCCTCCACCATCCCGCGCAACAGCGACATCAGCCTGAACTACCGCAAGATGTTCCAGGCCAAGCGCCCCGCTTCCACCGTCAGCCTGCTGGCCGACCCCGAGCCCCTGATGCGCCCGCCGCACGTGGCCACCATCCGCCGCAAGCCCTCCAGCAAGCCCAACTTCCGCCGCGGCACCATCAGTGGGGGCGTGCCCATCCCCATCAGCACGCCGCAGGTGCCCATGAAGGCGCCGGGCCCCTGCGTGCCCCTGGGCGGTGGCCGCAGCGGCAGTGAGGAGCTGCCCGTGCCCCCACCTGAACCGCCAGGAGAGCCCTCCTCCGGGGGAGACATGCTCACCATGATCCGCAGAGGGGTGCGTCTGCGCAGGACACTGACCAACGACCGCTCAGCCCCCTTCATCGCCCCCGTCAACCACAGCAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007948 True 1287 mRNA 0.65 11 38080756 38086751

Neighbor

gene id symbol gene type direction distance location
AMCG00007951 LOC107385061,LOC106582629 coding upstream 9913 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 53906 38018892 ~ 38026850 (+)
AMCG00007950 NA coding upstream 65962 38011176 ~ 38014794 (+)
AMCG00007949 pigu coding upstream 69961 38002950 ~ 38010795 (+)
AMCG00007942 NA coding upstream 490182 37579068 ~ 37590574 (+)
AMCG00007956 NA coding downstream 386965 38473716 ~ 38476488 (+)
AMCG00007959 pmepa1,LOC106582623 coding downstream 477724 38564475 ~ 38570223 (+)
AMCG00007965 NA coding downstream 489371 38576122 ~ 38605013 (+)
AMCG00007963 NA coding downstream 534371 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 549731 38636482 ~ 38661331 (+)
G27497 NA non-coding upstream 52833 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 63612 38016868 ~ 38017144 (+)
G27462 NA non-coding upstream 303294 37777065 ~ 37777462 (+)
G27400 blcap,bc10 non-coding upstream 581371 37495159 ~ 37499385 (+)
G27334 NA non-coding upstream 987426 37092649 ~ 37093330 (+)
G27552 NA non-coding downstream 352823 38439574 ~ 38439892 (+)
G27553 NA non-coding downstream 354785 38441536 ~ 38442071 (+)
G27561 NA non-coding downstream 394546 38481297 ~ 38482391 (+)
G27581 NA non-coding downstream 585120 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 705698 38792449 ~ 38834594 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 864198 37203870 ~ 37216558 (+)
AMCG00007889 NA other upstream 1777915 36296218 ~ 36302841 (+)
AMCG00007873 fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 other upstream 2459955 35610982 ~ 35620801 (+)
AMCG00007854 NA other upstream 4285815 33763513 ~ 33794941 (+)
AMCG00007827 ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 other upstream 6640378 31414154 ~ 31440378 (+)
G27518 NA other downstream 58233 38144984 ~ 38146850 (+)
AMCG00007952 romo1,LOC102788570 other downstream 81819 38168570 ~ 38170146 (+)
AMCG00007957 raly other downstream 269178 38355929 ~ 38423155 (+)
G27551 NA other downstream 345294 38432045 ~ 38436595 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 605988 38692739 ~ 38708915 (+)

Expression


Co-expression Network