Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007950 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 38011176 ~ 38014794 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03008 | Ribosome biogenesis in eukaryotes |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007950 | True | 504 | mRNA | 0.60 | 3 | 38011176 | 38014794 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007949 | pigu | coding | upstream | 381 | 38002950 ~ 38010795 (+) |
| AMCG00007942 | NA | coding | upstream | 420602 | 37579068 ~ 37590574 (+) |
| AMCG00007937 | chd6 | coding | upstream | 436790 | 37553993 ~ 37574386 (+) |
| AMCG00007940 | NA | coding | upstream | 509445 | 37496217 ~ 37501731 (+) |
| AMCG00007938 | blcap,bc10 | coding | upstream | 514974 | 37495198 ~ 37496202 (+) |
| AMCG00007947 | NA | coding | downstream | 4098 | 38018892 ~ 38026850 (+) |
| AMCG00007951 | LOC107385061,LOC106582629 | coding | downstream | 52594 | 38067388 ~ 38070843 (+) |
| AMCG00007948 | NA | coding | downstream | 65962 | 38080756 ~ 38086751 (+) |
| AMCG00007956 | NA | coding | downstream | 458922 | 38473716 ~ 38476488 (+) |
| AMCG00007959 | pmepa1,LOC106582623 | coding | downstream | 549681 | 38564475 ~ 38570223 (+) |
| G27462 | NA | non-coding | upstream | 233714 | 37777065 ~ 37777462 (+) |
| G27400 | blcap,bc10 | non-coding | upstream | 511791 | 37495159 ~ 37499385 (+) |
| G27334 | NA | non-coding | upstream | 917846 | 37092649 ~ 37093330 (+) |
| G27300 | NA | non-coding | upstream | 1054722 | 36956182 ~ 36956454 (+) |
| G27263 | NA | non-coding | upstream | 1165652 | 36843981 ~ 36845524 (+) |
| G27489 | NA | non-coding | downstream | 2074 | 38016868 ~ 38017144 (+) |
| G27497 | NA | non-coding | downstream | 12586 | 38027380 ~ 38027923 (+) |
| G27552 | NA | non-coding | downstream | 424780 | 38439574 ~ 38439892 (+) |
| G27553 | NA | non-coding | downstream | 426742 | 38441536 ~ 38442071 (+) |
| G27561 | NA | non-coding | downstream | 466503 | 38481297 ~ 38482391 (+) |
| AMCG00007923 | LOC105031092,LOC105901836,LOC102299656,LOC101482251 | other | upstream | 794618 | 37203870 ~ 37216558 (+) |
| AMCG00007889 | NA | other | upstream | 1708335 | 36296218 ~ 36302841 (+) |
| AMCG00007873 | fam174b,LOC103466638,LOC101474125,LOC102798031,LOC103147863 | other | upstream | 2390375 | 35610982 ~ 35620801 (+) |
| AMCG00007854 | NA | other | upstream | 4216235 | 33763513 ~ 33794941 (+) |
| AMCG00007827 | ell3,LOC103370942,LOC102298519,LOC102798071,LOC108431223,LOC107714787 | other | upstream | 6570798 | 31414154 ~ 31440378 (+) |
| G27518 | NA | other | downstream | 130190 | 38144984 ~ 38146850 (+) |
| AMCG00007952 | romo1,LOC102788570 | other | downstream | 153776 | 38168570 ~ 38170146 (+) |
| AMCG00007957 | raly | other | downstream | 341135 | 38355929 ~ 38423155 (+) |
| G27551 | NA | other | downstream | 417251 | 38432045 ~ 38436595 (+) |
| AMCG00007970 | rab22a,LOC107596793 | other | downstream | 677945 | 38692739 ~ 38708915 (+) |
