AMCG00007956


Basic Information

Item Value
gene id AMCG00007956
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38473716 ~ 38476488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007956
ATGAGTTGCCAGTCGTTGCTGTGCTGCCTCCTGCTCAGCTTGACCAGCGTGCTGATGGTCTACACACACATGGTGATTGAGGAGCAGGTCACCATGAATTTGTCTTCGGCACCAAGTGTGCCGGGCATGAAGCAGATAGATGTCCCATCTATCATCATAGTAGaactACCGAAAACCGTGAAAAAGAACAACATAAAGAcgacagacagaaaacaaagaaaaAACAAGTTCATCGACGCGCCCAGGAAACCGCGGCCGTCTCCCCCGGCCAACTGCGTGCCTCTGTGGGGCAGCTGCAAGGTGCCGGGCGCCGTGTGCTGCCAGCCCTGCGCCTTCTGCCAGTGCCGCCTGTTCAAGACCGTGTGCTACTGCCGCATGGGCAACCCCCGCTGCTGA

Function

GO: NA

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007956 True 396 mRNA 0.56 3 38473716 38476488

Neighbor

gene id symbol gene type direction distance location
AMCG00007948 NA coding upstream 386965 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 402873 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 446866 38018892 ~ 38026850 (+)
AMCG00007950 NA coding upstream 458922 38011176 ~ 38014794 (+)
AMCG00007949 pigu coding upstream 462921 38002950 ~ 38010795 (+)
AMCG00007959 pmepa1,LOC106582623 coding downstream 87987 38564475 ~ 38570223 (+)
AMCG00007965 NA coding downstream 99634 38576122 ~ 38605013 (+)
AMCG00007963 NA coding downstream 144634 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 159994 38636482 ~ 38661331 (+)
AMCG00007971 NA coding downstream 237273 38713761 ~ 38726766 (+)
G27553 NA non-coding upstream 31645 38441536 ~ 38442071 (+)
G27552 NA non-coding upstream 33824 38439574 ~ 38439892 (+)
G27497 NA non-coding upstream 445793 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 456572 38016868 ~ 38017144 (+)
G27462 NA non-coding upstream 696254 37777065 ~ 37777462 (+)
G27561 NA non-coding downstream 4809 38481297 ~ 38482391 (+)
G27581 NA non-coding downstream 195383 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 315961 38792449 ~ 38834594 (+)
G27667 NA non-coding downstream 379043 38855531 ~ 38855767 (+)
G27670 NA non-coding downstream 429566 38906054 ~ 38908182 (+)
G27551 NA other upstream 37121 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 50561 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 303570 38168570 ~ 38170146 (+)
G27518 NA other upstream 326866 38144984 ~ 38146850 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 1257158 37203870 ~ 37216558 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 216251 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 1026591 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 1033923 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 1063732 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 1340539 39817027 ~ 39834952 (+)

Expression


Co-expression Network