AMCG00007963


Basic Information

Item Value
gene id AMCG00007963
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38621122 ~ 38627736 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007963
CCCACTGTCCTTTGCGCACGGCGTGACGGCGTCGCCTGCATTGCCTTCCGGTACGACCTGCCGTGCCGCCGCGTCCTCGGCTCGGCGACAACACAGCGGCGCACGTCGGTTCCGCGGGTCCTGCTGTGCGGAGGAGCGGCGACATGAGCGCCGACAACGCTGCGGCGGACGGCACGGTGCCTCTGCGCAACCTGCTGAACTCGGTGCGCTGCGTGCGGGACCGGGTGAGAGATGGAGAGTCCAAGGAGGCGAGTCAGGCATTCAAGGCTGCGTCCCAGGAGGCTACCAGACTGAGCCTAGCCTTCTCCAAGCCCCCCCTGCCTTCCCCTGATgGCTGTGACCAACTCGCAGACTCCATTCAGAAGAGTGTCCTAGCACTGGCTACAGTCTACTACTGGCTCCCCAAAAGCCAAGGCATCACTCTGCGCCGGATGGTCCGCGACGCCACGGCGGAGGTGCTGGGGGGCGTGGCACAGCTGATTGAGGTCATCCTCAGCTCCCCCCTGCAGAGTTTATCCCAGGAGCAGCTGACCTCGACTGGCGGAGTGTGGTCGTCCTGTGACCAGTTCACACACCTGCCTAGAGACAACCAGATGGCCGTGCTGGGAGTGCTGTCCTCCTGCTTTGGTGTGGTTAAGGACGCCATAGAGGAGATGGAGCAGGCGCAGTCGGACAGTTTGGACCCTTTCAGCGACGTCCTGGACGACGAGGGGCTGGACAGCCGGGGGAACCAGGACACCTACTGGTCAGAGGCGGACCGGCGGCTGCTGTCCCCCTGCCAGGGCCTGATGAAAGCGTCTCGTGCCTGCCTGAAGAAGCTGATGGCCGCGGTGCGCGGTCACGGCAGGGTGGACACGCCCGAGAGCATCGCACAGCTGGACGACATCGCGGACATCACCAAGGACATCAGCCCCAGtgTCGATGACCTGGCCCTCAGTCTGTACCCACCCATGAACTACGCAGGAGTACAAATGAATGCTGCCACCCTTGCCTCGGTCCTGAGGAAAGTGCTCCAGATTACCAGGGCCAGTCACGTGTGCACGGAGAGTGAGTTGACCTGGGTGCAGTTCCTGGAAGGAGCTGTCGACCACAACATGCAGAGAGTCACAGAGCTGACACAGGCCTCGGTGTAGGGCACCAGTCAGCGCCAAGGCCACAGGCCACAGTGCCATGGTCACAGCTGCGGACCAGCTATGGGGGACTCTgagcgtgtgagtgtgtgtgtagacaGTGCTCCCTGTCTTATTAGAAATGAGTGTCCTTAACTCAAATGTTGTCTTTTGCAACACAACATCAACCCCAAAATCTGAGCAGGTTCAAACACAGCAGTTTctggtctgttcttctttttcagaagaaaatgcttttatatggctgggctgtgtgtgtgtgtgtatgtatgtatgtatgtatgtatgtatgtacacgTGTActtaagtgtgtatatataggcacacagtatttaaataatgcttGTAAATGCTTCGGAAAATGCATAGTGATTTCACCCATAAATAATGGATAACTGAAGAAGATTGAGTGTGATGGGTACAGTTTATTAAAAGTAACCAAAGTTATTTAACTGCCACACTGTGTCCCAGCACATCTCTACTGTGGCACCATACCATCACCCAACTGTGGCAGCCACAGGACGCACCCTGGGGTATTAGCTGTTGTCTTAATCTCATTACGCAGTCGAGTCAGAATGACTGTTGTAACAGAATAGCAGGTGAGTCAATAGGGAGTGAAAGGTAGGACCTTGGCTTCACGGCAGATCAATTTACAGGGAAAGAAGCAAAAGAACCCCCTCTGCTCCGTGCAGAGGAGTCTTTAGACACTGAATACACCTTTAATGTGTAAAAGACTGAAGACTTTTTATGTAAAAGGCAAACCAAGTTGGCCGGGACTGCTGGGCACTGGTTTTCTGCTCACTCCAAGGCAGGGGCAGGAAACTACAGGGCTCAGAAGGCAGCAGGGGCGTATGTATGTGCAAAAATTGAGACTTTATTAAGGTTGAAGCACAGCTGTGGCCAAAGTGCTGATCGCACAGTGCTTCAGCACCGCCAGCTGCACCCAATCCACTGATGGCAGACCATCCTGCGCCCACAAGCAGCCGACCTGTCACAGCTGACTCAACAACAGTCCTAGCAACCTGGAAAACCAAGGAAGGGTGTGTGTACGCCCTCGGTCTGAGGaatgcctctctctctgagaacaataaattgattatttgtgatttttctttttccattggCATTATTATCTGTGTATCAGAAATATATAGTTGGATCACCATGCTTTCTTGAAG

Function

GO: NA

KEGG:

id description
K21626 CCNDBP1, DIP1, GCIP; cyclin-D1-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007963 True 2308 mRNA 0.54 11 38621122 38627736

Neighbor

gene id symbol gene type direction distance location
AMCG00007965 NA coding upstream 16109 38576122 ~ 38605013 (+)
AMCG00007959 pmepa1,LOC106582623 coding upstream 50899 38564475 ~ 38570223 (+)
AMCG00007956 NA coding upstream 144634 38473716 ~ 38476488 (+)
AMCG00007948 NA coding upstream 534371 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 550279 38067388 ~ 38070843 (+)
AMCG00007964 NA coding downstream 8746 38636482 ~ 38661331 (+)
AMCG00007971 NA coding downstream 86025 38713761 ~ 38726766 (+)
AMCG00007968 stx16 coding downstream 130120 38757856 ~ 38767584 (+)
AMCG00007969 npepl1,LOC107666140 coding downstream 140475 38768211 ~ 38784621 (+)
AMCG00007979 NA coding downstream 233791 38861527 ~ 38898891 (+)
G27561 NA non-coding upstream 138731 38481297 ~ 38482391 (+)
G27553 NA non-coding upstream 179051 38441536 ~ 38442071 (+)
G27552 NA non-coding upstream 181230 38439574 ~ 38439892 (+)
G27497 NA non-coding upstream 593199 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 603978 38016868 ~ 38017144 (+)
G27581 NA non-coding downstream 44135 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 164713 38792449 ~ 38834594 (+)
G27667 NA non-coding downstream 227795 38855531 ~ 38855767 (+)
G27670 NA non-coding downstream 278318 38906054 ~ 38908182 (+)
G27708 NA non-coding downstream 426803 39054539 ~ 39055627 (+)
G27551 NA other upstream 184527 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 197967 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 450976 38168570 ~ 38170146 (+)
G27518 NA other upstream 474272 38144984 ~ 38146850 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 1404564 37203870 ~ 37216558 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 65003 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 875343 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 882675 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 912484 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 1189291 39817027 ~ 39834952 (+)

Expression


Co-expression Network