AMCG00007965


Basic Information

Item Value
gene id AMCG00007965
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38576122 ~ 38605013 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007965
ATGAGAGGAAGATCTGCCGGTGCCCACTCAGGGGCTCCGACAGGAGGATGGGAGATGTCTGTGCCACAGGACACGCTGGAATATTctgcaaaaagcttttttacaatcaatctgaaaaaagaaaatcaaaccatTCTTCATCAACTGAagttaaaatcaaatcaaataatatcccgaattaaaaaaaatgaggCTGAACTTGCAGAAAGCCTTCGAAAAAAGATCAGTTCCTTACTAAAGTCAGATGTCAGCTCCCTGTCCATTGAGGAAATTGCAGGACAAGCAAAAATACTTGGAATTCATATAGATGAGGATCAAGAGCAAAATGCCAAGAAAGCAGCACAGTGCATACTGGCCAcagttgattttgaaaatattccTGAATGCAAAGTAAAAATGCTGCCCTTGCAAGGAAACCTTTGGAAAGAATGGTCCAAATTAGATAAGGAACAGTCAAGACCAAAAAATGCTACAAAAGAAATTACTTTAAGTCAGTACAATGAGAAACTTAGCCAGGACAAAAAATCTGTTCGCAGGAAGCAGGCGGAGCAGGGACCATCACAGGAAATTACAaagattatacattttcttcttgaAACCAAGGGAGttcaaagaatatattttttagaaatgttgAAGTATGACATAGATTTAAAGTCTAGGCAAAAGCTAGCCACATTGagagaagaatacaaaaaattatGTGAGAGTTCAACAGGGTCTCACAAGGATCTTCTTCAAAAGTTGGATAAGCAAATTTCAGAGACCTCCATTGGATTAGAGCATGTGATGCGAGAAATAGGTCAGATTTATGAAATTTGTACTGAACATGGTCAGTGTGCTGCATTATCCCAAGATAAAATTAATCTTTTACCAAATGTAGCTGCTGATCTGCTTTTAGATGGATACCCTTTAGAGCTGCTGGATGGCGATGTAGGGTATGTGCTTATTAACTGGGTGACTAAGAATGTTGGTGATGTATCTGCCAATGATGTGAACATCAGAGATCGTCAAAACCTTGTTGACATTCTCAACAAAATAACTAAGGCTGCAGCCAAAATGGAATTAAAGGAAGGAACTTACTCACAATTCTCTGATGTGATGCATTATGATCCACAAAGGAACACGTTTTACATTCCAGGCCTCATGCAGGGTAACCCTCCAATGGCCTCTGTGAATCCAGGCTACAGTGACAAGGTATTTGCcttaaagaaatatgttttccaGCACATTGAGGAACAAAAAAGAATGCAAGCCTTCTCAACAATTACCGAGTTTACTGAGCATGTTAGGATAATATGGAAAGCTGTTAAAACTGAAGAATTTATCTTTAATTTTCAGAACAGCCTTGTAGCTGTTGCTTACAATGAGGCATCaaaaaaatgttcagatttGGAATGGAGTATAAAGAAGCACTTCAATTCCTGGTTAGAAAAAGCTGACAATCAAATTGCTAACTGTAAAGCTGACTTATTAGACACCATAGCCTCACAACTGAAACATGAGGTGCAAGAGTCAGCTGATACTATGGAAAAAAACAGTCTTCAAAAACTTGAAGACTACTTCAAAAGCAGTGAAGAAAACATTCTCCTGGTGCAGAAGTATAAAGCTGAATTAGTTTCTAACATTAAAGCAATTACTAGATTTATGTTGTTAAATGCAGAAACTGAGTTTGAAGTTTCAGTTCTAAGACAGAAAGAATTGCAGAAATTCAAAATTGCACAACAACAGTATAAGACAGCGATTAAAACAGATAGAATGCGAAAGAGATTTCATGAAGAAAATGATCCAAAGAGAAAACTTGAGAAAATGAAGGACGAATACTTTGATGATTTCAAAGATATGTACTATGAAAAGAATGAAACCCAGAAGCAAGCCAAGAAATTTCCTGTGGCAGAGCAAAGCCCTGGTCCGGTTCATGAGACGCCCCTCTGGGCAGCGATGCGAATGCAGACTGCAGGCTACACAGCTGCCTTCGCCCTGCACTCGATGAGACAGGCACAGCATCAGGCGGTTCAGCCAGCGGCTCTGGCTCCCTGTGCTGTACGGAGGCAGGTCCCTTTAAATACCGTGTTCCTGGCCAGACTCGGCCCACATGCCAGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007965 True 2106 mRNA 0.40 5 38576122 38605013

Neighbor

gene id symbol gene type direction distance location
AMCG00007959 pmepa1,LOC106582623 coding upstream 5899 38564475 ~ 38570223 (+)
AMCG00007956 NA coding upstream 99634 38473716 ~ 38476488 (+)
AMCG00007948 NA coding upstream 489371 38080756 ~ 38086751 (+)
AMCG00007951 LOC107385061,LOC106582629 coding upstream 505279 38067388 ~ 38070843 (+)
AMCG00007947 NA coding upstream 549272 38018892 ~ 38026850 (+)
AMCG00007963 NA coding downstream 16109 38621122 ~ 38627736 (+)
AMCG00007964 NA coding downstream 31469 38636482 ~ 38661331 (+)
AMCG00007971 NA coding downstream 108748 38713761 ~ 38726766 (+)
AMCG00007968 stx16 coding downstream 152843 38757856 ~ 38767584 (+)
AMCG00007969 npepl1,LOC107666140 coding downstream 163198 38768211 ~ 38784621 (+)
G27561 NA non-coding upstream 93731 38481297 ~ 38482391 (+)
G27553 NA non-coding upstream 134051 38441536 ~ 38442071 (+)
G27552 NA non-coding upstream 136230 38439574 ~ 38439892 (+)
G27497 NA non-coding upstream 548199 38027380 ~ 38027923 (+)
G27489 NA non-coding upstream 558978 38016868 ~ 38017144 (+)
G27581 NA non-coding downstream 66858 38671871 ~ 38729032 (+)
G27648 NA non-coding downstream 187436 38792449 ~ 38834594 (+)
G27667 NA non-coding downstream 250518 38855531 ~ 38855767 (+)
G27670 NA non-coding downstream 301041 38906054 ~ 38908182 (+)
G27708 NA non-coding downstream 449526 39054539 ~ 39055627 (+)
G27551 NA other upstream 139527 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 152967 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 405976 38168570 ~ 38170146 (+)
G27518 NA other upstream 429272 38144984 ~ 38146850 (+)
AMCG00007923 LOC105031092,LOC105901836,LOC102299656,LOC101482251 other upstream 1359564 37203870 ~ 37216558 (+)
AMCG00007970 rab22a,LOC107596793 other downstream 87726 38692739 ~ 38708915 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 898066 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 905398 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 935207 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 1212014 39817027 ~ 39834952 (+)

Expression


Co-expression Network