Item | Value |
---|---|
gene id | AMCG00007971 |
gene name | NA |
gene type | coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030123.1 |
NCBI id | CM030123.1 |
chromosome length | 53548854 |
location | 38713761 ~ 38726766 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
id | name | namespace |
---|---|---|
GO:0036269 | swimming behavior | biological_process |
GO:0005198 | structural molecule activity | molecular_function |
id | description |
---|---|
K10707 | VAPB, ALS8; vesicle-associated membrane protein-associated protein B |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00007971 | True | 918 | mRNA | 0.56 | 7 | 38713761 | 38726766 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00007964 | NA | coding | upstream | 52430 | 38636482 ~ 38661331 (+) |
AMCG00007963 | NA | coding | upstream | 86025 | 38621122 ~ 38627736 (+) |
AMCG00007965 | NA | coding | upstream | 108748 | 38576122 ~ 38605013 (+) |
AMCG00007959 | pmepa1,LOC106582623 | coding | upstream | 143538 | 38564475 ~ 38570223 (+) |
AMCG00007956 | NA | coding | upstream | 237273 | 38473716 ~ 38476488 (+) |
AMCG00007968 | stx16 | coding | downstream | 31090 | 38757856 ~ 38767584 (+) |
AMCG00007969 | npepl1,LOC107666140 | coding | downstream | 41445 | 38768211 ~ 38784621 (+) |
AMCG00007979 | NA | coding | downstream | 134761 | 38861527 ~ 38898891 (+) |
AMCG00007981 | NA | coding | downstream | 173562 | 38900328 ~ 38904511 (+) |
AMCG00007978 | prelid3b,LOC108231491 | coding | downstream | 182519 | 38909285 ~ 38917976 (+) |
G27561 | NA | non-coding | upstream | 231370 | 38481297 ~ 38482391 (+) |
G27553 | NA | non-coding | upstream | 271690 | 38441536 ~ 38442071 (+) |
G27552 | NA | non-coding | upstream | 273869 | 38439574 ~ 38439892 (+) |
G27497 | NA | non-coding | upstream | 685838 | 38027380 ~ 38027923 (+) |
G27489 | NA | non-coding | upstream | 696617 | 38016868 ~ 38017144 (+) |
G27648 | NA | non-coding | downstream | 65683 | 38792449 ~ 38834594 (+) |
G27667 | NA | non-coding | downstream | 128765 | 38855531 ~ 38855767 (+) |
G27670 | NA | non-coding | downstream | 179288 | 38906054 ~ 38908182 (+) |
G27708 | NA | non-coding | downstream | 327773 | 39054539 ~ 39055627 (+) |
G27709 | NA | non-coding | downstream | 332765 | 39059531 ~ 39059734 (+) |
AMCG00007970 | rab22a,LOC107596793 | other | upstream | 4846 | 38692739 ~ 38708915 (+) |
G27551 | NA | other | upstream | 277166 | 38432045 ~ 38436595 (+) |
AMCG00007957 | raly | other | upstream | 290606 | 38355929 ~ 38423155 (+) |
AMCG00007952 | romo1,LOC102788570 | other | upstream | 543615 | 38168570 ~ 38170146 (+) |
G27518 | NA | other | upstream | 566911 | 38144984 ~ 38146850 (+) |
G27847 | LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 | other | downstream | 776313 | 39503079 ~ 39504377 (+) |
AMCG00008007 | ncoa5,LOC107666089,LOC107740257 | other | downstream | 783645 | 39510411 ~ 39592411 (+) |
AMCG00008010 | NA | other | downstream | 813454 | 39540220 ~ 39545607 (+) |
AMCG00008020 | NA | other | downstream | 1090261 | 39817027 ~ 39834952 (+) |
G27974 | NA | other | downstream | 1329866 | 40056632 ~ 40059386 (+) |