AMCG00007972


Basic Information

Item Value
gene id AMCG00007972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38733689 ~ 38743043 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007972
ggggagacaCACATTTTCTCTACCGCAGACAAACGGCAGCCTCCCAAGCTCTGTTCTCCGTCTGCTTCCCCGTCTGTATCCCCTGGACCCAGAACAGTCCTGCGGTCTGCGTTGCACTGAGGGGTCtgcactgacagactgacagcgGATTGAAAACAATAACACCAATAAGACTTTGACACCACAGGCAAGGAGGGACGAAGAactgaaacacacaatcaaCAGGAATCTACATTTTGAGAAAGTTTTTGTTTGGGGAAAGTTTGGgggtggaaaagaaaaaggattttccaattatttttatttcctgggGAATGGGATTGCTCCTAAGGAGGGGCACCAGCTGAAGCCCTTGCCCTGTCCAGAATAAGCTGGGATTGGGGACTGTGCCATTGGGAGAGGATCTACATTTAAGCATGGCACGGGCTGGGGCAACACACCTGGCAGGGGGGCTGTGGATGGTGTACCTGTGGGAAGTGGTGCTGGTCTCCAGCAGTAAGCTGTGGGAAGTCCCGATGGCCCCCTACCCCCCCGCCAACTCCACGGCCAAGCTCCTGTGGGAGCCGCAGTGCCTGTCTCAGCTGCGCCACCTACAGGACGGGGCCCGAATCACAGCCCTCATCCCCCCACGGCTGGAGGGAAACTGGATCTCCACCAGCTGTGAGGTGCGCCCGGGGCCGGAGTTCCTCACCCGCTTCTACACCTTCTACCCGGGCCGTCTGTTCAAAGCCCTACAGTTCTACTACCGGGACGGCAGCTGCAGCGAACCAATCTACACCCTGGTGGTCCGGGGCAAGCTGCGCCTGCGGCAGGCCTCCTGGATCACACGAGGGGGCACGGAGGCAGAGCACCACTTGCTCAAAGTGGGCGTGGTTCTGCACAGCCCGCGAGCGCTGAGGGAGCTGTCCACACGGCTGCAACTCTCCTGCACTGGGCTGCTGTCCCGGCAGTGGGCCGCGGGGCGAGTGTATGAGCTGTTCAATGCCAGAGCAGGCCGGGACTGCCTGGCTGGGCTGGGCTTCTCCATGcaggagctggggctgctgcgGGTGGAGACACAGCACCGCCCGCACGGCCGGCTGGTGCAGGAATTGTTCCTGGGAGATGTGCACACCGACTGGGCCCAGCGCATACAGCACCGCCCCACCGGCTACCAGAGCCCCCTGCAGAGCGCCATGCACCACATCCACCCATGTGCGGTGTGTGGGCTGGTGTACCGCTCCTCAGAGCACCAACCCCCCGTGTTGCCAAGGCCACGAGCGCTGGCCCTGGCGCTGGGCGGGCGCTGGGTGAGTGGGCAGTGCGAGGCGCGTCCGGCTGTGCTCTTCCTAACACGTGACTTCAGCTTCCATGAGGAACACCGCTCCTGGGAGGGCCGCTACCATCACTATGCTGACCCTGCCTGCCGTCAGCCCACCTTTGCCTTGCGGGCGGTCGGCCACTATGCATGGGGGGGCCCCTCCACCACGGTGCAGGGTGGCACGGAGCTGGTGTTCAAGGTGACGTGGGCGAGCGTGACTGCGCTGGACCAGGCAACACTGCGGGCGCTCAACGACTCGCGGCCGGGCAGCTGTGGCCGGGCGGGCGGATGGGTGCTTGGCGAGGAGCAGGATGTCACGTTCACCGGGGGCTGCGCTGCACTGGGCATCAGGCTGCCGCATCGGGAGTACGAGCTCTTCAAGATGGAGCTGGACCACCGACAGCGCCCCCTGCTGTTCACAGGGGAGAGGCCCACCGACGGCTCCAGCCCCGACCGGCTGGACAAGAGACCCACCTCCTACCAACCCCCCTTGGTCCAGTGTGTTGCCCCCCATgagcccccaccccctcctcggTATAGCCAGCACAgctccccccaccaccaccacctgccCCCCTCCACTGCCACTTCCAGTGCCAGTGCCCAATCCCCCCTGCTTTGGCTCTCTGTGCTGGGTGGGGTCAGCTGGCACCTCTTCACTGCCCACTGAGAGACAATGCCTGCCCCCCGTATGACCCCAGGTGGCTTCCGTGAATAGGGAGAACAAGCAGAGGCTACACTGCACTTCAGAGCTCACCACTCCCCCTGCACCCACcctgactgcctgactgactgactgacttccCAATTGACTGATTGCccgagtgactgactgactgactgagcacCAGCTTTGGCCCCCCGTCTCCTCGCTTCTCCTGAACTAGGTCCAGCTGTGTCCAGCACACTCAGCCTCCCCCCCCACAGCTGGCTCAGCACTGCTACAATCATGCAATCCTCTCGTCGGCATGCATGACTCCAGCCCCTGCGGAGGAAACAGTAATTTAGATATTACACTAAACTGACAAGAGGAGGGggcagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007972 True 2342 mRNA 0.62 4 38733689 38743043

Neighbor

gene id symbol gene type direction distance location
AMCG00007973 ppp4r1 coding downstream 40915 38679465 ~ 38692774 (-)
AMCG00007974 NA coding downstream 54538 38676674 ~ 38679151 (-)
AMCG00007967 NA coding downstream 87707 38635057 ~ 38645982 (-)
AMCG00007966 pck1 coding downstream 121108 38608702 ~ 38612581 (-)
AMCG00007960 NA coding downstream 219445 38511919 ~ 38514244 (-)
AMCG00007975 nelfcd,LOC107554192,LOC107685805 coding upstream 42493 38785536 ~ 38790785 (-)
AMCG00007976 NA coding upstream 51061 38794104 ~ 38817732 (-)
AMCG00007977 NA coding upstream 88062 38831105 ~ 38836137 (-)
AMCG00007982 slc32a1,LOC108436412,LOC108272428 coding upstream 199792 38942835 ~ 38949522 (-)
AMCG00007988 NA coding upstream 233872 38976915 ~ 38985485 (-)
G27626 NA non-coding downstream 21352 38710852 ~ 38712337 (-)
G27557 NA non-coding downstream 293827 38439603 ~ 38439862 (-)
G27491 NA non-coding downstream 716220 38017230 ~ 38017469 (-)
G27463 NA non-coding downstream 956371 37777069 ~ 37777318 (-)
G27438 NA non-coding downstream 1162808 37570259 ~ 37570881 (-)
G27639 NA non-coding upstream 6084 38749127 ~ 38767568 (-)
G27661 NA non-coding upstream 33118 38776161 ~ 38779752 (-)
G27668 NA non-coding upstream 112505 38855548 ~ 38855777 (-)
G27686 NA non-coding upstream 177927 38920970 ~ 38922688 (-)
G27833 NA non-coding upstream 711997 39455040 ~ 39455858 (-)
G27522 NA other downstream 569147 38161286 ~ 38164542 (-)
G27502 NA other downstream 641811 38085929 ~ 38091878 (-)
G27442 chd6 other downstream 1145164 37573034 ~ 37588525 (-)
G27439 NA other downstream 1162201 37570957 ~ 37571488 (-)
G27437 NA other downstream 1164405 37567617 ~ 37569284 (-)
AMCG00007984 NA other upstream 161715 38904758 ~ 38907811 (-)
AMCG00007983 NA other upstream 181538 38924581 ~ 38937663 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other upstream 289744 39032787 ~ 39049597 (-)
G27720 NA other upstream 311110 39054153 ~ 39055679 (-)
AMCG00007993 dynlrb1,LOC106565026 other upstream 345514 39088557 ~ 39091895 (-)

Expression


Co-expression Network