AMCG00007979


Basic Information

Item Value
gene id AMCG00007979
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38861527 ~ 38898891 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007979
ATGGCTGGGGACATAGCTGTGGGAATGATCTTCAGGTTGCTGCtgcccctgctgctgctggctgCCATTTCTTTTCGCTACAATGGTCTGTCCTTGGTctacctcctcttcctcctcatcctcccGCTGCTCCCCAACCCTACAGTTGCCTCCATGCGTGGCACAACGGGTCGGTTTCTGCGCTTCATCTGCTACATCAGTGTCAccttcctggctgtgcagtgtgGGCTGCAGATCACCTTCATCTACGTCCCCAGGCAGGGTAAGACACCGCAGCTGCGTAGTACCGCTGTGGACAGCTGCGGGGGGCCAGTGAGTGGGATCTGGGAGTCGGTCCTGTGCCACGTGGGCATCGTACGGTTCAGCGCAGTGGATGGGGGAAACATTGTGCGCCTCTTGGCCCCCGACCTGGGCCTGTTCCTGGCCGGGCTGCTCATCTACAGACTCTGCAGGAAGCTACTGAGGCCCCAGATCCCCATCGCTGCCCACGACAACTGTATCCTGCGCTCAGACACCGAGGTACGGCCAGCGTGCTGCTCTGTTGCGCACTCAGAATTGGTGCACCAGGGTTCCCCCCTTTTGCCAAAGCTGgACCTGCAGGGCTCGGGCTTGGACTCAGAGTCAGAATCGGAGGAGAGCAGTGCTGACACAGATGGGTCGTCATTGGACAGCTCGGACCAGGCCGCTCAGACGGGCGGCAACCAGCCCAAGTTCATCCAGAAGCTGATGGTGTTCGCGGCCGGACTGCGCCTGCTTCTGACCGCTGTCCTGAACACGGCGGGCAAGGTGGTGGTGACTGTGCTGCTGGGCCTGGCAGGTATCATGCTGCCCTCTCTGACCTCGGCAGTGTATTTCTCTGTCTTCCTGTGGCTGGTGTGGTGCTGGGCCTGCCATCGCCCAATCAGCCTGGTTCTCTTCAGCAGCCTGTGTGTGATGGTGGCCATCTTCAGTGCTGGGCACCTGCTGGGGCTCTACCTGTACCAACTGCCATACTTCCAGGAGCTTGTCCCCCCTCAGGACATCTACGCCAGACTGTTTGGCATGACAGCGTTCATCCGTACCTCCATCTCGGACCCGCACCGGCTGGGCCTCCACGGGGACATCACCTGGCCCGTGCTGCTGAACCCCCTGGTCCTGCTGGTGCTGTACTACACCCTGGTGGCTCTGCTGCACAAGTGGGTGCACATCCCAGCAGAGGTGGCCCTGCCCCAGTTTGAAAACAGACTCCCAGAGGGGCGCCATGGTCTGCGCAGGATGCTGTGGGCGACCGGAAACGAAAAGAAGGAGCTGCTCACCAGTATGGATGAGGACAACAGCATTTCCAATGAGGTATTTCCTCCCAaggaggaggaggaagaagaggagaaggagcaggaggaggaggaggaaggggtcTCAGAGGGCCTCACCGAGAGCGAGCCCGCTGGGCCCAGCGGGTTGGTGCTGTTCGGACAGTTCATCATGAAGCAGAGCTACGTCAGCGCCCTCATCGTCATGATGGTCTGGAGTATCACCTACAATAGCTGGCTGACCTTTGTGCTGCTGGTGTGGTCCTGCGCCATCTGGATGCTGCGCGACCGCCGGCGCTACGCCATGCTGAGCGCGCCCTTCCTGGCCCTGTACGGCACGGCGCTGGTGCTGTGTGCCTTCGTGAGTGGACTGCGGCTGCAGCCTGATGAGCTGTACCCGGGCCTGCCCCCTGCCGTGCTGGTGGACTTCGACCTCAGGGGCCACCCCACGCCCTGCACACACCTGGGCGCTAAGGTCTCCTACGCCTTCACGTTCTGGCTGTTGCTGCGTCAACACCTGACAGAAAAGCAGGAAGAGCAGCGCCTGAAGCAGGAGCCCCTGGAAGAGATCAAAGTGTCAGAGTCAGgaCAGGACGACAGCCCTGTGACCCTGATGGAGGTCCTGGGGTCCCTGGTGAAAAGCATGCTGGTCAAGTACTGGATCCTATTCTGCTGCACCATGTTCTTTGTGGTCAGCTTCTCGGGCAAGGTGGTGGTCTACAAGATCCTATACATCATGCTGTTCCTCTTCTGCGTGGTGCGGTATGATGTTTGGCGCCGGGTGTTAAAGTACTTCTGGGCGGTGGTTGTGGGCTACTCCATGGTTGTGCTCATCGCCATCTACATGTACCAGTTCAAGACCGTGTCCGGACTGTTCCGGCAGATCATGGGCATGTCAGAGGAGGGcctGCGTGACCTGGGTCTGGAGCAGTATGACACGGTGGAGCTTTTTGCCCGGATTCTGTTACCCTCCAGAGAAGACCTGAGAGCCACCGTGGACGTGATCATGGATGCcattaaggaaaacattgaaaaactTCAGAAAAGGCTGGCCAAGGAGCAGCAGAGTGGCGGCAGTCTGGACACCCTGGACAAGCCAGGCCTCTCTGAGCCGGACGAGGCTTCGAACGCGGGCACCGAGAAGCCGCTGAATCAGTGGGTGCTGGTAGTGGACCGGGCTGGACTGCTGGTGCTGCAGGCCCTGTGGgggctgcagcagctgcaggagctgtGCTGGAGACTGCTGGAGCTGCACAGCCTGAAGATCGTCTCTACAGGCATCATCTGGGTCACATTGAGAGAGGTGTCTCTCATGAATTACCTGTTCGTGGTGCTCTGGTGTTTTGCCCTGCCCTTCTCGCGCATTCGCCCCCTGGCCTCCAGTGTTTCCACAGTGTGGGCCGGCCTCATGGTGGGGCTGGTACCAGCGAACGGCAGTCTGTCTCCGGGGGGCAAcatggaggagctgctgcagaggtcCGTGCTGTACATGGAGCCGGTGGACCCGGCGCTGTGGTGTGTCCAGCGGCACCAGCTGTACTTCCGGCTGAGGAACGGCCTGCAGATGCCTGTCACCGGCACGCTGTTCACCGGCATCACCCGGCAACACCTGGACCAGGGCTTGCTCCCCTGCCTCAAGTACTTCATCAACTACTTCTTCTACAAGTTTGGCCTGGAGCGGATGGATTTCTACGCCCTGCTGCACTCCTGTGCCCTGATTGCAGTCCTGTCACGCCGGCGCCGGAAGTCCATCGGCGAAGTGTGGCCCAAATACTGCTGCTTCACTGCCAGCCTCATGGTCTTCCAGTACCTGCTGTGCATCGGGATTCCCCCGGCCCTGTGCTACGatTACCCATGGAGGACCTCTAGGCAGGCTCTCAGCTCCAACCTCATCAAGTGGCTCTACCTGCCCGACTTCGCCAGGCAGCCCGACCCCATCTTCATCATCTatgACCACATGCTCCTTCTGTGCTCCTGCCTGCAGGGGCAGGTGTTTATGGAAGAGAACACAGTAGCAGTCCGTCTCCTGGCAGGGGACAATCTGGAGATCAGCCGCAGTCTGGATTCCCGAACCCTCAGCCAGTACACCCCCGTCGGCAACTTCCTACACTGCAGGTCTTACCTGGACATGGTCAAAGTGTTTGTGTTCAGCTACTTCTTCTGGCTGGTGCTGTGCCTCATCTTCATCACCGGCACCACGCGCATCAATATCTTCTGCATGGGCTACCTGGTGGCCTGCTTCTACTTCATGCTGTTTGGAGGCACCCTGCTGCTGCAGCCGGTGCGGCACATCCTGCGACTCTGGGACTGGCTCATCGGCTACACCTGCCTGGTCATCGCCATGAAGAACCTGCTGTCTCTGGGGTCCTGTGCCTACCTGGACAGCCTGCTGCAGAGAGGCTGCTGGTTCATTCAGACATTCAGCATGTTCTGCACCATCAAGGGCTACAACATCCCACCCCCTACTGGCAAGTGCGAGCTGCCAGAGGGTGAGGCGGGCATTGTCTGGGACGCCATCTGCCTAATGTTCCTCCTGGCGCAGCGCAGAGTCTTCCTCAGCTACTACTTCCTGTACGTGGTGTCTGACCTGAAGGCCTCCAAGATCCTGGCATCCAGGGGCGCCGAGCTCTTTGAGGCCAAGGTAAAGAAGCGCATCGCGGCTCGGCTGGAGCTGGAGAAGAAGTCTGTGGAGACACTGAAGAGACAGATGGAGAAGATAAAATCCAAACAGAAGAGGTTTGAAGGGGGTGGGAGTGAGAAGGGGGACAAAAGTGATAAAAAGGAGTGGTGGCGGCCATGGGTGACCCACTCCTCCATGGTGCGCAGTGGCAGCTACTACCTGTTCGAGTCGgacagcgaggaggaggaggaggaccacgaggagaaggaggaggaaccCCCCCCCAAGAAGAAAACCGCCTTTCAGCTGGCGTACGAGGCCTGGATGACGAGCTCCAAAGCAGCCCTGGAGGGACACAAGAAAGAGGAGTCCACcctgaggagggaggagaggaggagagccaGGCAGGAGCTGCACAGACAGCATGAGAGCATGATCCAGCGTCTCATCGATACAGTCCGGTTCGCCCGGGTCTTCGTCCACTCCCTCCTGGACGACCTCACAGATGGCCTCAACTCCTTCTGCAAAGACAACCTGGACATCtccaaggtgctgcgcttcgaGAGGGCCATGCTAGACCAGGAAATGAAGAAGGGAAAAGATGCTTCCCAGGACACTATCAGGCAGTTCTACCAGAGCAGACTGTCCAGGCAGGCCATGCTGCAGTCCCCCGAGGACCCGGAAGAGCCCGAGCACCTGCCATCCTCCCCGTGTGGCTACAGCAAACTGCACAGCTCTGACTCCAAGCTGtcctggagcagcagtgtgtcCAGCTGCTTGACTGACATGACCATGCTGGGCTCACGCCAGCCCACGCAGGAGGACCTGGACGAGGAGCTGCCGCCAGGCCCCCCTGCCCTCCCTGCACCCCCTGCTGGAGACCAGCTCCGCCGCAGACTCCTGAAATCGACCAACATCGACCTGGCCTCCTTTGACACAGAGAGCCTCGGAGCAGGcAGCCTTGTGGAGGTCGTCTtggaggagaaagaagaaagggaTGAAGATAGacaggaaggagaggaggaggacgatGATGTGGATGGTGAACCCCAGCCGCAGCCCCACACCTTGGTCCTGGGCTCTGGTGGGGATCCCCTGGATGAGACGGAGAAGCTGCAGGACCCAAGACCGCTCACCCAGGAGACGCGCGCCCTAACTGCCAGCGAACTGCTGCTGAACAAGATGTTTGAGAACCAGGAGATGGAGGAGTCGGACAGGTTCTACGAGGTTCTGCCCCAACCAGTGCCCCTGCTCTTTGCGCTCTACAACACAATGGTGTCCAAGTCTGAGATGCTGTGTTACTTCGTCATCATCCTCAACCACATGGTGTCGGCCTCCCTGCTCACACTGGTGCTGCCAGTGCTCATCTTCCTCTGGGCCATGCTGTCCcTCACAGTGGTTGTCAAGTATTTCTTCCAGTTTGGCTTCTTCCCCTGGACCAGCTCAGCATACCGCGGCATCAACGCGGAGCGCCCCTTCGCCCTGCCCAACATCATCGGGGTGGAGAAGAAGGACGGCTACAAGGACGGCTACGTGCTCTTCGACCTGGGGCAGCTGTTGGCCCTGTTCTTCCACCGGTCCATCCTGAAGTGTCACGGCCTGTGGGACATGAAGGAGGTGGAGATGCCCGACTTCTTCAAGAAACTGAAGCGCAAGACACAGAAGCAGCGGGGGGGCGGAGAGCGGGGGGGTAGGGCCGGGCGCAGGCTGCCCTTTCTGCAAAGCTCCACGGGCTCCCTCTTCCAACGCAGGAAGACACATGACAGCACAGACGGCAATGGCAATGTGGAGCCGCCGCAGCGCGAGTCCCGCAAGAGGAAGCGGCGCCATTCGAAGATTCCCCTGACCCGGAAGGAGATAATGAAGCAGAAGGTCCGGGAGAAGATGCTGGAGCTGAAGGCCAAGACTGTGGAAATagCTCTCCACATCTACCTACCCGTCAGGCAGTTCTTCTACGACATCATCCACCCGGAGTACAGCCCCGTGTGCGACGTCTACGCCCTCATGTTTCTGGTCGACGTTGTGAATTTCATTGTCATCATTTTTGGGTACTGGGCTTTCGGAAAACACAGCGCGGCGGCCGACATCACGGAGTCCCTGTCCGAGGACCAGGTGCCCGAGGCCTTCCTGGTGATGCTGCTGATCCAGTTCGGCACCATGATTGTGGACCGGGCCCTGTACCTGCGCAAGACCCTGATGGGGAAGTGTGTGTTCCAGGTGGTTCTGGTGTTCGGGATCCACTTCTGGATGTTCTTCATCCTGCCGGGGGTCACGGAGAGGAGGTTCAACAAGAACCAAGTGGCCCAGCTGTGGTACTTCGTAAAGTGCGTGTACTTCGGACTTTCCGCCTACCAGATCAAGTGTGGCTACCCCAACCGCGTCCTCGGCAACTTCCTGACCAAGAACTACAACTTCCTCAACCTGTTCCTGTTTCAGGGGTTCCGCCTGGTCCCGTTCCTGACGGAGCTGCGTGCGGTGATGGACTGGGTCTGGACAGACACCACACTCAGCCTGTCCAGCTGGATTTGTGTGGAGGACATCTACGCCAACATTTTCATCCTTAGGTGCTGGAGGGAGTCTGAgaagAAATACCCCCAGCCTTCAGggcagaagaagaagatggTGGTGAAGTACGGCATGGGCGGCCTCATCATCTTCGCCCTCATCTGCATCGTCTGGTTCCCCCTGCTTTTCATGTCGCTGGTGAAGTCCGTGGCTGGGGTGACCAATCAGCCGTTGGACGTCTCCATTCAGCTCAGCATAGGGGGGTATGAGccGCTGTTCTCCATGAGCGCCCAGGAGCAGAACCTGCAGCCCTACTCCCAGTCCGCCTACAACCAGATGACCAAGCAGTACGCCACGCATCCATCAGCCATGCAGTTTATAGTGAACTACATGCCGGAGGACATCGTCGTGGCGAGAATCAAGAGCGACGCCAGTCTGCTGTGGAGCATCAGCCCGGCCAGCCGAGCCGCCATGGTGCAGGAGCTGAGCAACTCCTCGCACATTTACATCACCCTGCGCTGGACCCTGCTCAGGAACGCCTCTCTGGTGATGAACGCGCAGACAGCCGGCGAGCACACAGTGAAATACGAGGACAAGGGCATGAGGGACGAGATCGTGCAGATGCTCCAGGGGACGCGCAGCCAGCCTGTgaTCCTCTCTGCACTGCTGCCCAAGTTCATCCCCCACAGCGAGGGGACGGAGGAGCAGCAGAGCCTGGCGCTGTTCCGGCCTGTGGCGATCCGGCTGCAGACGGCGAAGGCCAGTGTGCCGGGGGAGCAGGCACCGCAGTGGTGGGTGGTGCAGGAGTGCCAGCCAGGCCGCAGCCTCGCCAGCTGTCACAACATCGAGGTGGTAGTCTTCAGTGACAAGGTCAGCCCCTCCAGCCTGGGCTTCCTGGCAGGCTATGGCATCGTTGGGCTGTACATGTCGGTGGTGCTGGTGATCGGGAAGTTCGTGCGGGAGTTCTTCAACGGGATCTCGCGCTCCATCATGTTCGAGGAGCTGCCCTGTGTGGACCGTGTGCTGAAGCTCTGCACGGACATCTTCGTGGTGCGGGAGACCGGCGAGCTGGGCCTGGAGGAGCAGCTCTTCGCCAAGCTCATCTTCCTGTACCGCTCCCCCGAGACCATGATCAAGATGACCCGGGAGAAGGAGAGTGACTga

Function

GO: NA

KEGG:

id description
K22128 PIEZO1_2, FAM38; piezo-type mechanosensitive ion channel component 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007979 True 7578 mRNA 0.60 54 38861527 38898891

Neighbor

gene id symbol gene type direction distance location
AMCG00007969 npepl1,LOC107666140 coding upstream 76906 38768211 ~ 38784621 (+)
AMCG00007968 stx16 coding upstream 93943 38757856 ~ 38767584 (+)
AMCG00007971 NA coding upstream 134761 38713761 ~ 38726766 (+)
AMCG00007964 NA coding upstream 200196 38636482 ~ 38661331 (+)
AMCG00007963 NA coding upstream 233791 38621122 ~ 38627736 (+)
AMCG00007981 NA coding downstream 1437 38900328 ~ 38904511 (+)
AMCG00007978 prelid3b,LOC108231491 coding downstream 10394 38909285 ~ 38917976 (+)
AMCG00007980 NA coding downstream 22145 38921036 ~ 38925671 (+)
AMCG00007986 NA coding downstream 105110 39004001 ~ 39012851 (+)
AMCG00007987 LOC107703109 coding downstream 152071 39050962 ~ 39052920 (+)
G27667 NA non-coding upstream 5760 38855531 ~ 38855767 (+)
G27648 NA non-coding upstream 26933 38792449 ~ 38834594 (+)
G27581 NA non-coding upstream 132495 38671871 ~ 38729032 (+)
G27561 NA non-coding upstream 379136 38481297 ~ 38482391 (+)
G27553 NA non-coding upstream 419456 38441536 ~ 38442071 (+)
G27670 NA non-coding downstream 7163 38906054 ~ 38908182 (+)
G27708 NA non-coding downstream 155648 39054539 ~ 39055627 (+)
G27709 NA non-coding downstream 160640 39059531 ~ 39059734 (+)
G27760 LOC105912234,LOC101475128,LOC102305233,LOC102193169,LOC107093176,LOC103134693 non-coding downstream 307490 39206381 ~ 39208293 (+)
G27781 NA non-coding downstream 367531 39266422 ~ 39266673 (+)
AMCG00007970 rab22a,LOC107596793 other upstream 152612 38692739 ~ 38708915 (+)
G27551 NA other upstream 424932 38432045 ~ 38436595 (+)
AMCG00007957 raly other upstream 438372 38355929 ~ 38423155 (+)
AMCG00007952 romo1,LOC102788570 other upstream 691381 38168570 ~ 38170146 (+)
G27518 NA other upstream 714677 38144984 ~ 38146850 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other downstream 604188 39503079 ~ 39504377 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other downstream 611520 39510411 ~ 39592411 (+)
AMCG00008010 NA other downstream 641329 39540220 ~ 39545607 (+)
AMCG00008020 NA other downstream 918136 39817027 ~ 39834952 (+)
G27974 NA other downstream 1157741 40056632 ~ 40059386 (+)

Expression


Co-expression Network