AMCG00007988


Basic Information

Item Value
gene id AMCG00007988
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 38976915 ~ 38985485 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007988
CAGGGACCCCAGCCCCTCCGAGATGAGCCAAAAGCCCTGGGCCAGCCCAGCTGACCAGACCGCTGCCATCCACACACCCCCTCCTCAGGAACGCCCAGACAGTCTGTCCTTCAGGGACTTCTGGACCGAGGTGGAGCACATCCGCCAGGGAAGCAGCGACAGCGAAGCGGACTGTACGGCACGGGACTCCAGACACACGGAGGAAGGGGAGCAGGAGAAGCAGTGGCTGCAGGATGCTGGCCTGTCCACTTTAATCAGCGAAGACAGTGAGGACGTGGACAAGGTGGTGTTGCTGTCCACCCTGACCCGCACGCAGGCCGCGGCCGTGCAGCGCCGTCTGGACTCCTACACCTGCTCCCTGCGCAAGAGGAGCAAGCAGCCCCCCCGTGACGTAAGGGACATCTTCAGCCACTCCACCAGCACCCAGGAAGACAACtcacagAACTCTCTGGCAGAATCCCAGGACTCTGTTCCGGAACTGCGGACCCGAGCCCCAGACGGCAGAATGGACAGCCAGGGCAAAACACCCCCAAAAGCTGTGAGTGTGGATTCACAGGGCAGTGTGGCCAGGGAGGAAGTGTTCAGCACTGACATCGCCTACTGTGAACAGGCCGCCATACTGCTCAAACAGGCCAAGCAGCCCAGGCCTGGCCCCTTGCGCCGGCGCAGGGATGAAGGCGCTCTCACAaaaGTGGTGTCTCCGCAGTGCCGCCTCGGCGTGACCCGGATCCAGGACCTGTCTGCCCAGGACATGAAGAAAGTGCGGCAGCTCGCACTGATCGACATGACGGCACTGTGCGACCTACTGGAGCTCGACCTCAAGCGGCACAAGATCGGCAAGAGGAAGATCCCGGagAGCTCGCTGTTCGGGGTGCCCCTGGCCACACTGGTGGAGAACGACCAGAAGATCAAACCCAACATCACTGTCCCTCTCATCCTGCACAGGGTGAGTAGCCCCCGCTCCtatgcccccccgccccccccgcaCGCTCTTTCCCTGCCATACATCAGACCAGCTCACCTGTGCAGCAGCTTCCTGGTCCTGGATTACCTACGTGCTCAAAACGGCAACTGTGAGCAAATCAAGTTTAGATTAATGGACATACACAGTGCCGGGCTGACCCAGGGTGCACTCTCTCTCCCGTCACAGCTGCTGTCCTTCCTGGAGAAGAAGGGCCTGGACTCAGAGGGGATCCTACGAGTTCCGGGATCCCAGGCACGGATAAAGGTCCTGCAGCAGAAGCTGGAGAGCTCCTTCTACAACGGGGGCTTCAGCTGGGAGGAGATGAGCCCCAATGACGCTGCCGCCCTGCTCAAGAAGTTCATCCGTGAGCTGCCCACCCCCCTGCTCACGGCCGAGCACCTCAGCACCTTCAGTGCCGTCAGAGACATCCTGGACCTGAAGCCCAAGCTGTGGGTCCTCAacctgctggtgctgctgctgcctgaGCCCAACAGGAGCACCCTGAAGGCACTGCTGGATTTCCTGAGCCGAGTGGTGTCCCACGAGCGCCGGAACCGCATGAGCCTCTGGGCCGTGTCCACCATCATGGCGCCCAACCTGTTCATGCACAAGGCTGTGCCCTGCAAGCTGGCGGAGGGCGAGGAGAAGGGGCAGGCAGAGCTTGCCGCCGACGTCATGCGGCTCCTTATCCGCCACCAGGACCTGCTGTGGACGATCCCCAACTTCCTGATGAGCCAGGTGAGGAAAATGAACGAGAACAGCAGCCGCCGGTACCAGTTCTATGACAGGCGCATCAAGAGCCTGCTGAGGAAGATCCACACGGAGAGCCGTGAAAAGCAGGACAAGAACACCTCCGAGCCATGCCGCACAGTGAAGATCCAGTTGGGGGAGCTGCTGAGCAGCACCATGGAGGTGCGTCTGAGCATGGACTCTCAGGCATCCGACCTACTGACCCAGTTCCAGCGGGACCTGCGCAGCTCTGAGAACGGCAAGAGCCTGATGAGGAGCATAGCGCCTTGTTTAAAATGCACCGTATCTCCCCCCCCCGACAGTAATGGCACCATCGTCTACCCTGACTGCGCCATCTACGAAGTCGGAGGCAACATAGGTGAGCACTGCCTGGACCCCAACACGCACCTGCTGGACCTGTACAACAGCAACCCCAGGGGAGAGTGGGTGATCAGGTTGAAGCCCGGGACCTCGCGGGGTCTCTGAGAGCCGGGGGCTTGATGGGTCTGCGCTCTGGCACTGGACCCGGGGCGGTGGCCACGGTCACTGCCCAGGCCGCCAGGACAGAAGGGACTTCAAGGCAGGAACAGGGCAGGCATCCCTCTACCTCGGGAGGCCTTTTCACAGAGAGCCCAGGCCAGGCAgcaacagagaaagagagagaggagtgagtGATCCCAGAGCTGAGAGCTACTGGGAGACATCGAACACTAACACATTGTTCCTCCACGTCTCTGTCCTGTACGGGTCTGCCTCTGCTCACCACTGAGGGGACAGACTGGCCTCGGCCCCCCTCCCTCCGTCCGGTGTTGTGGACAGCTCGGCCCAGGGGagctccacacacacattctggGTTCTGGGGAGAACATTCCAGAAGAAGCTGGCATTCCGTCGCCCTGGGCACAGAGGTCCCGAGCAGCCGGCCAAGGAACTGTCCACTGCTTGGGGATGATGAACTGGAAAATAGATCGTCAATGGCAACTGTACCAAAAGAAGCTGGACTtcaattttgtgtttgatttggcggtttgtttgtcttgtattttgtttttttgaaggacaaaaattactgtttttattatttatgaataaatacataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007988 True 2795 mRNA 0.60 13 38976915 38985485

Neighbor

gene id symbol gene type direction distance location
AMCG00007982 slc32a1,LOC108436412,LOC108272428 coding downstream 27393 38942835 ~ 38949522 (-)
AMCG00007977 NA coding downstream 140778 38831105 ~ 38836137 (-)
AMCG00007976 NA coding downstream 159183 38794104 ~ 38817732 (-)
AMCG00007975 nelfcd,LOC107554192,LOC107685805 coding downstream 186130 38785536 ~ 38790785 (-)
AMCG00007972 NA coding downstream 233872 38733689 ~ 38743043 (-)
AMCG00007989 map1lc3a,LOC101077757,LOC102789823,LOC107685654 coding upstream 85095 39070580 ~ 39078098 (-)
AMCG00007992 LOC108424671,LOC107566077,LOC107691346 coding upstream 128226 39113711 ~ 39150259 (-)
AMCG00007994 NA coding upstream 187003 39172488 ~ 39204907 (-)
AMCG00007997 NA coding upstream 220822 39206307 ~ 39213355 (-)
AMCG00007995 nfs1,LOC107601922,LOC107559867 coding upstream 235597 39221082 ~ 39236482 (-)
G27686 NA non-coding downstream 54227 38920970 ~ 38922688 (-)
G27668 NA non-coding downstream 121138 38855548 ~ 38855777 (-)
G27661 NA non-coding downstream 197163 38776161 ~ 38779752 (-)
G27639 NA non-coding downstream 209347 38749127 ~ 38767568 (-)
G27626 NA non-coding downstream 264578 38710852 ~ 38712337 (-)
G27833 NA non-coding upstream 469555 39455040 ~ 39455858 (-)
G27904 NA non-coding upstream 778445 39763930 ~ 39764417 (-)
G27927 NA non-coding upstream 805061 39790546 ~ 39791484 (-)
G27949 NA non-coding upstream 856846 39842331 ~ 39847044 (-)
G28036 NA non-coding upstream 1291678 40277163 ~ 40277647 (-)
AMCG00007983 NA other downstream 39252 38924581 ~ 38937663 (-)
AMCG00007984 NA other downstream 69104 38904758 ~ 38907811 (-)
G27522 NA other downstream 812373 38161286 ~ 38164542 (-)
G27502 NA other downstream 885037 38085929 ~ 38091878 (-)
G27442 chd6 other downstream 1388390 37573034 ~ 37588525 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other upstream 47302 39032787 ~ 39049597 (-)
G27720 NA other upstream 68668 39054153 ~ 39055679 (-)
AMCG00007993 dynlrb1,LOC106565026 other upstream 103072 39088557 ~ 39091895 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other upstream 514836 39500321 ~ 39504592 (-)
AMCG00008042 NA other upstream 1282787 40268272 ~ 40288574 (-)

Expression


Co-expression Network