AMCG00007997


Basic Information

Item Value
gene id AMCG00007997
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 39206307 ~ 39213355 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007997
TTTGTGTAACTACTACTTCTCTTGTGTCCTGTTTTCCAGATGGCTGCACAGTGCGTGACCAAAGTAGAGCTCTCGGTGTCCTGCAACAATCTCATCGACAAGGATGTGGGCTCCAAGTCAGACCccctgtgtgtgctgctgcagaGCACCGGCGAGGACAAGTGGGTTGAGGTGGACCGCACAGAAAAGATAAAGAACTGCCAGGACCCCGAGTTCTCCAAGAAGATCCGGGTGGACTACTACTTCGAGAAGGTGCAGAAGCTCAAGTTCGGGATCTACGACATCGACAACAAGTCCACGGACCTCGGGGACGACGACTTCCTGGGAGGGTTCGAGTGCACTCTGGGGCAGGTGGTGTCCAGTAAGAAACTCATCAGGCCCCTGGAGCTGAAGAAGGGGAAGCCAGCAGGAAAAGGCACCATCACGATTTCAGCGGAGGAGATCAAAGATAATCGGGCCATCGTGCTGGATGTTGAAGCTCGGGGTCTGGACAAGAAGGACTTGTTTGGAAAGTCGGATCCCTTCCTGGAGTTTTTTAAGCAAGCAGACGATGGCAAGTGGCAGCTGGTTCACAGGACTGAGgtGATCAAAAATAATCTGAATCCAACATGGAAACAATTTTCAGTCTCCCTCCAGACCTTCTGCAACAGCGACCTGAACAAGCCGATCAAGGTGACTTGTTACGATAAGGATGAAGATACCAGTTCTGATATAATAGGGGAGTTTACTTGCACTGCTGCTCAGCTGGTGGAGGTGAAAGATCACGCGGTCCATTGCTCTGATTATGATAGTGATGGCTCTCATGACCTTATCGGTGTTTTTGAAACTAAAGTGTCACAACTGCAGAACACAAGCCTCTCTGCACCGGTGGAGTTTGACTGTGTGCACCCcgagaagaagcagaagaagaaaaactacAAGAACTCCGGGGTGGTGAAGATCAGGTCCTGCAAGATCGTGGCGGATTACTCCTTCCTGGATTACGTCATGGGAGGCTGCCAGATCAACTTCACGGTGGGAATAGACTTCACCGGGTCGAATGGAGATCCTAAGTCCCCGGACTCCCTGCACTACCTGAGTCCAAACGGGCTGAACCAGTACCTTTCCGCCATCTGGTCTGTGGGACAAGTGGTCCAGGACTACGACACTGTGGGCCGGTACATTTTGGGCGCAGGGGAGCTTGAccctGTGTCCCATGAGTTTGCGCTGAACTTCAACCCCAGCAATCCCTACTGCCAAGGTGTGCAAGGCATTGTGGAGGCCTATCGCTTTGCTCTGCCCCAAGTGAAGCTGTACGGACCCACCAACTTCTCCCCCATCATCCACCATGTGGCCAGGTTTGCGGCTCAGGCCGCTCAGCAGGGAACAGCAGCACAATACTTCGTGCTGCTGATCCTGACTGACGGTGAGATCACCGACCTGGACCAGACACGGCAGGCGATCGTGGCGTGCTCCAAGCTGCCGATGTCCATCATCATCGTGGGCGTCGGGGAGGCCGACTTCAAGGCCATGGAGTTTCTGGATGGGGATGGTGGTGTCCTCAAGTCCCTCACAGGAGAGCCTGTGGCCAGGGACATTGTGCAGTTTGTGCCCTACAGGGACTTCGTCAGTgcACCTAAAGAGGCTCTTGCGCAGAGTGTGCTGGCTGAGGTTCCCACTCAACTGGTGTCTTACTTCAAAATGCTGAACCTGGCACCAGTGCAGCCGCCAAAGCCAGTGACCCAGTGAGGCACCTCATGGGCAGCAGCCGCCTCAAAATGTGCCTCGCATTCTTGACCACAAGGCGGCGTCACCCAGCTCAAACAGCACTGCTGAAGACGAGGGAATACATTCACCCGCCAGCCCGGTCTGGTTTTACAATTTGCCACTATAAGTAATTTAGAGAAGCTATAGATtatattccattattttttacatttttgtattacaaactaggaaatttgattattttgcagtattttttaGGGAGTAGATGAATTAAGGGCTGATCTTGCACAGGAGAGTGGATTCTGAACCCttaataatgcacattttagtGTCAATTCCACAATCATGGCTTAATTAGCCTCTAAAGCTTTGATTGTAACAATGGGCAATCTCTTAAAGCGATGCAATATTCTGTGGGAATTTACTTCCTATTAATATGCAGCCTAGCACTTAATCTAAGTTATGCACTTGCTTATATAGTCATTAGAAAGCCTTCTCTTGCGCACAATTAGAACCAAAGACGCGCAGCATGCCTTACTAAACTTTAGCTCATCAGGACTAACTGCCTTATAAACTGAATTGCCAATTCACCGGATCAATGGAAATATTGTATGCATGACACACTTTAGTCCAAAACCACGCGTGCGACTCCTGTCAGAAGACGAGAAGACCTTCTCCCCGTCAAGCGACGCCAACAGCGAGGGGTATCCCACGCACGTCTGTGTAACGAAATGCATATCCACTGCGTTATGCTTCAGAATGTGCCATTTGCCAAATATCTGTGTAAtctgttcagttttgttcaGCTTTTGAATACCATTCTGTGGACCATTCAGTTTTTTCTGATGGTGGGGGTGGAGCTGTATCCAGGCCATATCATTTGAAAGATCACATGCATTCCTTTTCTGACTCATTCAAATCGAGAGTGGTTGCATCGCACAGGATGGCAGCACGATGACCAGTACTGTAGATGACCGATCTCTACGGCCTGCTGTCCTGCTGAAATACAAGGGTCGCTTTAGATATGGCCGTTTGACAAAGGGTCGCCTTGCTTTTGAAGTGCAGGCAGCAGAATTGCAGTTGAAGTCCAGTAATCCTGTATTCCCAGCTCGTGTGGGTTTGAAGCATCCCCTGAGTGTCTGGTCCTGTTTCTTGCTCTCTTTCCAAAGGAGTGCTCTGGCCTGTTAGCCTTAATTCCCACCATCAGAAAACATCTCATTTCTGAGGGGagaaactttttattttatttttatatatataaatatcattgACATTTGTGCCTTAAACAGACACACTTCCGTAGTCTGATTTGAATGCAGCAGAATGAAAAACCTTCCCTTCcctctattttctgtcattgttaaaatggatgcattaataaatatttgtacctGGAGGTCAGAAGTGTTTCCATTCTTCTTTTATGTATTatctttattgtatttctcaGTGGGAGTTAAAGTATGAAGTTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007997 True 3182 mRNA 0.48 16 39206307 39213355

Neighbor

gene id symbol gene type direction distance location
AMCG00007994 NA coding downstream 1400 39172488 ~ 39204907 (-)
AMCG00007992 LOC108424671,LOC107566077,LOC107691346 coding downstream 56048 39113711 ~ 39150259 (-)
AMCG00007989 map1lc3a,LOC101077757,LOC102789823,LOC107685654 coding downstream 128209 39070580 ~ 39078098 (-)
AMCG00007988 NA coding downstream 220822 38976915 ~ 38985485 (-)
AMCG00007982 slc32a1,LOC108436412,LOC108272428 coding downstream 256785 38942835 ~ 38949522 (-)
AMCG00007995 nfs1,LOC107601922,LOC107559867 coding upstream 7727 39221082 ~ 39236482 (-)
AMCG00007996 rbm39,LOC106565016,LOC105017458 coding upstream 27092 39240447 ~ 39258230 (-)
AMCG00007999 rem1,gem,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107554936 coding upstream 56612 39269967 ~ 39289998 (-)
AMCG00008000 pnp4a,LOC107727769,LOC107727193,LOC107655042,LOC107685744,LOC107559547,LOC103041505,LOC108411380 coding upstream 87289 39300644 ~ 39306779 (-)
AMCG00008006 LOC106565397,LOC106583327 coding upstream 252216 39465571 ~ 39472392 (-)
G27686 NA non-coding downstream 283619 38920970 ~ 38922688 (-)
G27668 NA non-coding downstream 350530 38855548 ~ 38855777 (-)
G27661 NA non-coding downstream 426555 38776161 ~ 38779752 (-)
G27639 NA non-coding downstream 438739 38749127 ~ 38767568 (-)
G27626 NA non-coding downstream 493970 38710852 ~ 38712337 (-)
G27833 NA non-coding upstream 241685 39455040 ~ 39455858 (-)
G27904 NA non-coding upstream 550575 39763930 ~ 39764417 (-)
G27927 NA non-coding upstream 577191 39790546 ~ 39791484 (-)
G27949 NA non-coding upstream 628976 39842331 ~ 39847044 (-)
G28036 NA non-coding upstream 1063808 40277163 ~ 40277647 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 114412 39088557 ~ 39091895 (-)
G27720 NA other downstream 150628 39054153 ~ 39055679 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other downstream 156710 39032787 ~ 39049597 (-)
AMCG00007983 NA other downstream 268644 38924581 ~ 38937663 (-)
AMCG00007984 NA other downstream 298496 38904758 ~ 38907811 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other upstream 286966 39500321 ~ 39504592 (-)
AMCG00008042 NA other upstream 1054917 40268272 ~ 40288574 (-)
G28202 NA other upstream 1802804 41016159 ~ 41017248 (-)
AMCG00008069 rps21 other upstream 1986134 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 2192436 41405791 ~ 41412224 (-)

Expression


Co-expression Network