AMCG00008023


Basic Information

Item Value
gene id AMCG00008023
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 39843224 ~ 39848246 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008023
ATGAGCTGGGGCTCCAAGGGCAAGTCCgacgaggaggatgaggaggacaGCGAAGAGGAAGGGTGCGGGCAGAAGGGGCCGTGCACGGAGGACGAGGAAGAGATTGATCTCCAGACCGTGGacgaggaggagaaggagatcTCTGGTGGCACTGTCGGGCCCGAGGGAGTGCCCGCAGCCCTGGATGTGTGCTCGCTGGCGAGGCTGGGGCAAGTGTCGAAATCCGAGGGCAAAGCAGAACCAGGGTGTCTGAAAGAGGACGCGCAGTCCCAGAAGCCCAAAATCTGGTCCCTGGCCGAGACGGCAACCTCGGACAGCGCGCACAGAGCTCCGAGCAAGAGCGCCATCCAGCACACCGGCAGCGCGGACATCGGGGCGCTGTGGGCGGACTGGGCTTTGAGAAACGGACAGTATTTCCCCATGTATTACCCACAGTGTATCCTGCAGCAGAGCGAGTTGAACTGCCACATGCCTGCGCCGCACACTGGATTTGCAGATTTCTTCCTTGGGAAAAACCTCAGCATGCCGCCTGGATATCAGACTTTGGTTGTGGGGTGCCCGACAGGGGTCCCCCCGGCGCCTCACCTCTCTGCTGTTGCCGGGCTGCCCGTGTCTTATCCCGGGTTGCAGGAGTACAGCTTCATCCCGTATCCTCACCTGAGACACGCCGCACACATGAAGGAGAACCGGATGAGCTGGGGCTCCAAGGGCAAGTCCgacgaggaggatgaggaggacgaggaggataGTGATGAAGATGAAACCGGACAGAAGGGACATCACTCAGATGACGAGGATGAGATTGATGCCCACACTATGGACGAGGAGAACAAACAGATCTCTGATGGGCTTCACGGTTCCGAGGATTTCAGGACTTGCGACAGACTTACCCAGACAGGATTGAAGCTGGGCACGCAGAGCCCTGTTTGCCAGTCTGAAGAGGATTACAGGAGACCCGCGCAGTGCATCTTACCCCCAGACACTGCTGGTGTGCCCGCAGTGCCCAAAGATATAGCGCAACCGCAGAAACCTAAAATCTGGTCCCTCGCTGAAACGGCAACGTCCGTTAGACGAACAGACCCAACTGACAGGACCTCTCAGATCAGTACTCAAGATACTGGCAAATTGTGGAAAGATCTGGTTCTCAAGAACACCCACCAGTTCCCCGTGTATTACCCAGTTCACACCAGCAGACTCCTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008023 True 1203 mRNA 0.58 3 39843224 39848246

Neighbor

gene id symbol gene type direction distance location
AMCG00008021 NA coding upstream 34195 39797335 ~ 39809029 (+)
AMCG00008022 NA coding upstream 52560 39784824 ~ 39790664 (+)
AMCG00008011 NA coding upstream 272292 39568443 ~ 39570932 (+)
AMCG00008009 NA coding upstream 287402 39550076 ~ 39555822 (+)
AMCG00008012 NA coding upstream 330433 39512273 ~ 39512791 (+)
AMCG00008024 NA coding downstream 124317 39972563 ~ 39975851 (+)
AMCG00008027 NA coding downstream 214475 40062721 ~ 40074110 (+)
AMCG00008030 NA coding downstream 226980 40075226 ~ 40076278 (+)
AMCG00008031 NA coding downstream 252940 40101186 ~ 40114340 (+)
AMCG00008035 NA coding downstream 323451 40171697 ~ 40172836 (+)
G27881 slc12a5b,LOC107725712,LOC107550951,LOC107747216,LOC107683884 non-coding upstream 238396 39604612 ~ 39604828 (+)
G27788 NA non-coding upstream 552003 39290968 ~ 39291221 (+)
G27781 NA non-coding upstream 576551 39266422 ~ 39266673 (+)
G27760 LOC105912234,LOC101475128,LOC102305233,LOC102193169,LOC107093176,LOC103134693 non-coding upstream 634931 39206381 ~ 39208293 (+)
G27709 NA non-coding upstream 783490 39059531 ~ 39059734 (+)
G27960 NA non-coding downstream 109741 39957987 ~ 40003700 (+)
G27973 NA non-coding downstream 203644 40051890 ~ 40060205 (+)
G28032 NA non-coding downstream 429168 40277414 ~ 40277687 (+)
G28140 NA non-coding downstream 903229 40751475 ~ 40755976 (+)
G28141 NA non-coding downstream 910452 40758698 ~ 40759010 (+)
AMCG00008020 NA other upstream 8272 39817027 ~ 39834952 (+)
AMCG00008007 ncoa5,LOC107666089,LOC107740257 other upstream 250813 39510411 ~ 39592411 (+)
AMCG00008010 NA other upstream 297617 39540220 ~ 39545607 (+)
G27847 LOC108410937,LOC797048,LOC107560508,LOC107740256,LOC106583675 other upstream 338847 39503079 ~ 39504377 (+)
AMCG00007970 rab22a,LOC107596793 other upstream 1134309 38692739 ~ 38708915 (+)
G27974 NA other downstream 208386 40056632 ~ 40059386 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other downstream 393066 40241312 ~ 40247238 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other downstream 815726 40663972 ~ 40721745 (+)
G28395 NA other downstream 2144613 41992859 ~ 41993377 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 2565386 42413632 ~ 42437228 (+)

Expression


Co-expression Network