AMCG00008033


Basic Information

Item Value
gene id AMCG00008033
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40092723 ~ 40101200 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008033
ATGTCGGAGTCCGACATTTCTACCACCCTGGACAGAGCCATCAACCGCACACTGCGCTCCTATTGGCTGGATCGGCGCACACACCCGGATGTCCCGCCTCCTGCTGAATGTCGACCAACCGAACGTCTAAGAAACCGGAAGGGTAATCTGCACCTGTACGCTGCAGAAATGGACACTCAGCTGGAGACGTCTACAGGGGACTACGAGTTTGATGCACCTTCGGACGTCATGGACTTTAAAACCCTGGATAAAGAGGACAATGCCGATCACTGGTTTGATATGGTCGTGGAGCAAGGACCCACCGCAATGGATCAGCTTATAACTCCACTGAAAACTGATAAAACACCCTTTGGAGGACTGGCCAAACCAGATCTTCCCAGAGCTGTGGTTTCCCCCATGATGAAAGCTGAAACTCTTGACACAAATTCCCCCTCTGAGGATGAGCAGCCTTCCACTTCTGTTGCTCCTTCAAATTTGGTGACATCCTGGAGCCACGTGCCTTCTGCAGCCAACCAGCCTCAGAAGAAGGCCCACCCGGCACAGCCCAGGAGAGTTTCCAAGAGACTGTCAGGTCAGCAAAAGCGGGAAAACCAGCGCAAGACTATGGCCAAAATTCGTGAGGACAGGAGAAGCAATGCACCTGCCGCTGCTGTTCCTGCTGGAATCCCACCGGTTAAAAAAGCAAGGAGGAGTGGAAGTCGTGTCCATGCACAGCAGACTGCTACAGAACCCAGCACACAGGCTGATGAGATCCAGTCTCCCAAACAAAAAGGCTATGTTCGATCTACGACTCCAACTGTGCTCAAGAGGAGCGTTTCATCGACCAAGGCCAAGAGTTCAGAGCAGCAGGAGATGGACACCATTCAGAGCCTGCAGAAGGAGCTGGCAGAGCATCGCAAGAAGAACGAGACCTCCTACAAGGCGGCTATAGCTGGAAGTCAGCCAGCGAAGAAGATTGTTTTACCCCGAACCGTTCCTGTGGACTTCCACTTCTGCACCGATGAAAGAATTAAGCCGCATGCTGACCAGCCCTCTGAGACGAGCTACAAAGAGGTGGATTTCACTTCCCAGCTCCGTAAACACCCGCCTTCTCCGGCAAAATCTTTAAAAGGCCACACTATTCCTAAGCCTTTCAACTTGTCGTGTGGCACCAAACGCAAGTTTGAGGAATCGACCTATGTGTCTGTGGCACAGCAGGTCGAGCAGTTTCAGAAACGCACTCCTGCCAGGTACCATCTGAGGAGCAGacagagggaagagagagGTCCTACACCAGTGaagaatattaaattaaagatgaccAATCCCAAAACTCCACAGCTCATGACCAGGAAGCGTAGCCGTCCAGTCGCGGTGAAAAGCACAGCTGAGATTGAGGCAGAGGAGCTGGAGAAAATTCAGCAGTTCAAATTCAAAGCTCTGGAGCTGAACCGCAAAATACTTGATGGTGGGCTGCTGCCCAAGAAGCCTCCCGTCAAGGAGGTCACACAGGCTGTGGGCTTCAATCTGGAGATCGAGAAGAGGCtgcaggagagggaggccagcaAGAAGTCCGAAGTGGTGGAGGAGTACACGTTCCACTCTAAGCCACTGCCTGTGAAGATACTGGAGGATGtggttGGTGTGCCTGAGAAGAAGTCCTTGCCTCCCACTGTACCTCAGTCTCCAGCTTTTGCGCTCAAGAATAGAGTCCGCCTTGAGCCTAAGGTGGAGGAGGTGAAGGATGCTCCAGTGATCAAAGCAACCCCTATGCCACACTTTGGCCTTCCATTCCAGCCTAAGCCCATAGAAAATAAACAGGTGGAGGTGTGTCCATTCTCATTTGAGGCCCGGGAGAAGGAAAGACAGGCCCTTAAGGAGAAGAGGCTGGAGGAGCTGCGACATGGGGAGaTGAAAGAGGAGTTGAGGCAGCAGGCAGAAGCTGCATCTTTCAAAGCTCGTCCGAACATTGTCGCCCACAAGGAGCCGTTTGTACCCAAAAAAGAGAATCGCGCTGTTCTAGTTTCAGAGGGCTTTCAGCTCTCTACAGAGAGACGTGCGAAAGAGCGCATGGAGTTCGACAAAACCATGGCCGAGAAGGAGACCCAGCGGGCAatgaaggaggaggagatgagaAGGGATAAAGAAGAGCGTGAGAAGGAGGAGATTGCTAGACTGCGGCAGGATCAGGTGCACAAGGCTCAGCCTGTGCGGCGATACAAGAAAGTGGATTTGAAGAAAAGCGACGTGATTCTCACAGTCCCCGAGTCTCCCAATTTCTCAGACCGGTTTCGTCTGTGAACAAGCGCTGCATTAATGTCTTGTGCAAATATAGACTGATTTCATTACCCAACCCTCCTCTCTTTATATAAGAGGtgtggtgattttttttttacccaactCTAAGGTGATACACTTGTGtcgatttaaaaaaagaagtgtTAATATGAAGTAGTTGCATGTCTCCAGGACACTTCTAAACTCTACCTTACAGGTCCGACACGTCTGGCTGTTCTCTACCTTTCTGCACTGTTCTACAGGCTGTGCTAGAGCATTTAGGAGCTCCTGTGTAGCAAAGTGCATTTTCAAGTTTCAAGAACTCCTCACCTGGGCTGCAGCTGGTCCCGGCATCTTGGCAAACTATTTTCTGCACTTGCTGTTCCAtaaattaatttttcattctTAAATCTAGACACTGTCCTTTTGCTGTGCTTCTGAATTTTGTacttttcagaaatgtaaataatgcctATTACCATggttccttttatttttccttattaCTAGTATGTTTCAATACTATTGTTCCTTTTTGAAGCTGTAATAAAGACTGACTGCTGAAACCTTAA

Function

GO: NA

KEGG:

id description
K16812 TPX2; targeting protein for Xklp2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008033 True 2828 mRNA 0.50 16 40092723 40101200

Neighbor

gene id symbol gene type direction distance location
AMCG00008032 NA coding downstream 1522 40077508 ~ 40091201 (-)
AMCG00008028 LOC108233014,LOC100703573,LOC101171829 coding downstream 30750 40051029 ~ 40061973 (-)
AMCG00008029 LOC106565282 coding downstream 84121 39986928 ~ 40008602 (-)
AMCG00008026 rtfdc1,LOC106565284 coding downstream 108290 39981612 ~ 39984433 (-)
AMCG00008025 tfap2c,LOC106565286 coding downstream 147371 39929531 ~ 39945352 (-)
AMCG00008034 NA coding upstream 31343 40132543 ~ 40137452 (-)
AMCG00008040 NA coding upstream 120167 40221367 ~ 40226406 (-)
AMCG00008043 NA coding upstream 188450 40289650 ~ 40298668 (-)
AMCG00008041 NA coding upstream 227531 40328731 ~ 40356747 (-)
AMCG00008044 NA coding upstream 292878 40394078 ~ 40415758 (-)
G27949 NA non-coding downstream 245679 39842331 ~ 39847044 (-)
G27927 NA non-coding downstream 301239 39790546 ~ 39791484 (-)
G27904 NA non-coding downstream 328306 39763930 ~ 39764417 (-)
G27833 NA non-coding downstream 636865 39455040 ~ 39455858 (-)
G27686 NA non-coding downstream 1170035 38920970 ~ 38922688 (-)
G28036 NA non-coding upstream 175963 40277163 ~ 40277647 (-)
G28095 NA non-coding upstream 526577 40627777 ~ 40632764 (-)
G28110 NA non-coding upstream 558681 40659881 ~ 40663760 (-)
G28119 NA non-coding upstream 562717 40663917 ~ 40667862 (-)
G28139 NA non-coding upstream 647106 40748306 ~ 40750443 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 588131 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1000828 39088557 ~ 39091895 (-)
G27720 NA other downstream 1037044 39054153 ~ 39055679 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other downstream 1043126 39032787 ~ 39049597 (-)
AMCG00007983 NA other downstream 1155060 38924581 ~ 38937663 (-)
AMCG00008042 NA other upstream 167072 40268272 ~ 40288574 (-)
G28202 NA other upstream 914959 41016159 ~ 41017248 (-)
AMCG00008069 rps21 other upstream 1098289 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 1304591 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 1745733 41846933 ~ 41849954 (-)

Expression


Co-expression Network