AMCG00008034


Basic Information

Item Value
gene id AMCG00008034
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40132543 ~ 40137452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008034
ATGAAGACCAGGTCTGTTCAGGTAAGGGGCCGAGCTTGGGCTTCAGACTGTTACTGTGGAGTCTGGCGGGGGGCCAGTGTCCGGGAGGGTTCCATTCTGAGAGGAGAGCAAATCTCGCGCGCGGGGGTGCCAGCCCTCGCCTCGGTCCCGCACCGCTGCTGGCCGTGTCACGACGGAATAAACGGATGGCTCGGCAGACCTGTTGCCAATTCCTCCCCTTTCTCTGCTTCTTTGGCTGGATGGATGGCCGCCAGCAGTGAGGAGGAGCTTACAGCACAAAGTGCTCCCAGCAGCAGGATGTTCCAGCTGTCTGCACGCTGTGTGGGGAGCCTGCTGGCCAGACGGGGGATTACAGCCAGTGGCAGGGTGAGGGCAGCCAGCCACGGACATGAGATGGCCAAACAGGAGGACATGTCCCTTCCCATGTACTGTGACCGCCGGGATGTCCCGCTGCCCGACATCCCCTTTCAGCGCACCCTGAGCAGCCCGCAGCTGAGCCTGAAGCAGCGAGAGGGCGGGTCCTGGAAGGAACTGTCCATGGACGAGAAGATCGCCTTGTACCGCATAGCGTTCAATCAGACCTATGCAGAGATGAACAAGCCCACGAACGAGTGGAAGACGGTGGTGGGGGGAATCTTAATCTTCCTGGGCTTGACCAGCCTCATCGTGTGGTGGCAGCGTGTGTATGAGGATTGGAAGGCCCTTCAGGCCAAAAGGATGATTGACATGCGGATCAACCCAGTCGAGGGCTTTTCCTCCAAGTGGGACTATGAGAAGAAGCAATGGAAGaaataa

Function

GO: NA

KEGG:

id description
K02263 COX4; cytochrome c oxidase subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008034 True 795 mRNA 0.59 7 40132543 40137452

Neighbor

gene id symbol gene type direction distance location
AMCG00008033 NA coding downstream 31343 40092723 ~ 40101200 (-)
AMCG00008032 NA coding downstream 41342 40077508 ~ 40091201 (-)
AMCG00008028 LOC108233014,LOC100703573,LOC101171829 coding downstream 70570 40051029 ~ 40061973 (-)
AMCG00008029 LOC106565282 coding downstream 123941 39986928 ~ 40008602 (-)
AMCG00008026 rtfdc1,LOC106565284 coding downstream 148110 39981612 ~ 39984433 (-)
AMCG00008040 NA coding upstream 83915 40221367 ~ 40226406 (-)
AMCG00008043 NA coding upstream 152198 40289650 ~ 40298668 (-)
AMCG00008041 NA coding upstream 191279 40328731 ~ 40356747 (-)
AMCG00008044 NA coding upstream 256626 40394078 ~ 40415758 (-)
AMCG00008052 NA coding upstream 532218 40669670 ~ 40677744 (-)
G27949 NA non-coding downstream 285499 39842331 ~ 39847044 (-)
G27927 NA non-coding downstream 341059 39790546 ~ 39791484 (-)
G27904 NA non-coding downstream 368126 39763930 ~ 39764417 (-)
G27833 NA non-coding downstream 676685 39455040 ~ 39455858 (-)
G27686 NA non-coding downstream 1209855 38920970 ~ 38922688 (-)
G28036 NA non-coding upstream 139711 40277163 ~ 40277647 (-)
G28095 NA non-coding upstream 490325 40627777 ~ 40632764 (-)
G28110 NA non-coding upstream 522429 40659881 ~ 40663760 (-)
G28119 NA non-coding upstream 526465 40663917 ~ 40667862 (-)
G28139 NA non-coding upstream 610854 40748306 ~ 40750443 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 627951 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1040648 39088557 ~ 39091895 (-)
G27720 NA other downstream 1076864 39054153 ~ 39055679 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other downstream 1082946 39032787 ~ 39049597 (-)
AMCG00007983 NA other downstream 1194880 38924581 ~ 38937663 (-)
AMCG00008042 NA other upstream 130820 40268272 ~ 40288574 (-)
G28202 NA other upstream 878707 41016159 ~ 41017248 (-)
AMCG00008069 rps21 other upstream 1062037 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 1268339 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 1709481 41846933 ~ 41849954 (-)

Expression


Co-expression Network