AMCG00008043


Basic Information

Item Value
gene id AMCG00008043
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40289650 ~ 40298668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008043
ATGTTTTACACACAGCTTTTCATGTCCAAACGGGCACCGTTGTCTAAAATATGGCTTGCAGCTCACTGGGAAAAAAAGATAACTAAAGCTCACGTGTATGAATGCAATCTGGAAACCACGGTTAAAGACATACTTTCACCAAAAaTAAAAATTGCATTGAGAACATCAGGGCATCTGCTTCTGGGAGTGGTAAGAATATATTCCAGGAAAGCCAAATACCTCCTCGCAGACTGCAGTGAAGCTTTCGTGAAGATTAAATTGGCCTTTCGTCCAGGTTTAACAGACCTCCCCAGTGCCAACTTCGAAGCAACATATAAAGCTATCACTTTGGCTGAGGACTTCCAGGATTTTGAATTACAGCTGCCTGATGTCAATGCCATTGAAGTCACCGACCACTTCACTCTGAACCAGAGCCGGACTGAAGATATCACACTGAAAGAGGATTATGGGAATAGCTTTCTTATATTTGATGACAACTTTGGAGATGAGATTCGGCTGAGACAAGGCGGCCTCTTTGACGAAAGCGTGCGCATGAGTACAGACGAGTCTCTCCTGCCCAATATTGTTCTGAATAATGGTGAGGATATTCTGCAAACAGACGTGTCAGCAGAGAAGGAGGATCAACAAAATATACCCCCTCCAGATACCAATAATAATGACCGGCAGAGTCCTAAGCGCATAGAGGAAGGCCCAGGGATAAACGAAATGACGCTGCTGGACAACGCAGAAGAGGCGTTCACGCTGGAACCGGTCCCTGTGACTCCCACTtctgaaagaaagagagggaagaggaagaggagactGGTGGTGGATCACGCTAAGGAGCTGTCGAATAACGCCATTCGGGGTCAGATCTCCAACTGCTCTGACATCGTCGGCCTCCTGGTCATTGCCCCGCCCACAAAGCAGCTGATGAGATGGAAAGAGATGGGAGGAGTGGATAAGCTCTTCACGAGCCCGTGCTTTACTTTGCTAAATAGTCAGCTACTTAAGAAGACGGTGATGAACATGTTCCTGAAGGTCCCAGTCTACTACAGACGTCTGCAGTACAAGATACTAGCAGAGGGCGAGGAAAACGTATCAGAAAGCACTTTCCCAGAGCTGCCCTCGGAGGACTCCATGCATGTTCATCCTTCAGCAGGGATGGAAGCTCAGTCCGAGCAGAAACAGGACCACGACGGGAATGCGGTGTTCAGTTTGCACAGACTGTGTCGAGGTGACAGCCGTAAACAGGCTGCTGCCAAGTTCTTCATCTTTTTGGTATTAAAGAAGCAAGGAGCTATTGGTCTCAATCAGCATGAACCTTACCAGGATATTCTAGCCACACCAGGACCAATGTTTTATAAGTTGTAATTGAAGTGAGATATTTCTGTGCAGTGTCCATGGGCACACTAATGTAACACTGTGGAAACTTCTTTAGAGTTGGTCTTGGATGACTCTGTGTTGGAGCTGACCTCAAGGAACTAGACTTGTTTTTCATAGCTGGACAAGTGCGATTGCTCATAAAGTAAATGCTAGTTAACTAACACTTATGTATTTGCCTGAGGCTTCCTAAAGAccttatttgattttaaatagtattttgattagcataaaaatgtgtatttgtattaatattagtttGGTCATATAACCAAATATTTTTAACTCCTCCTAAAGTAAATACTAGGAATACATGTTATAGCCTGAAAACATCCTGTACAGTCTGATTAGTTTGTAGACACATATATTGTTCTCCATGCTGATTTCAGTACTTTCAATACACTAGAGTTGGCTAAACCATTTTGATATTtataacattcatttttttaatgaatacattcagtCTTGTTATGTTATATGTGTTTTGTGAAAAGATGTACAGTTGATTTTCTATcagtgttaaattaaatgttgaattaaaatGAGTATGACTTTCA

Function

GO: NA

KEGG:

id description
K06670 SCC1, MCD1, RAD21; cohesin complex subunit SCC1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008043 True 1919 mRNA 0.42 11 40289650 40298668

Neighbor

gene id symbol gene type direction distance location
AMCG00008040 NA coding downstream 63244 40221367 ~ 40226406 (-)
AMCG00008034 NA coding downstream 152198 40132543 ~ 40137452 (-)
AMCG00008033 NA coding downstream 188450 40092723 ~ 40101200 (-)
AMCG00008032 NA coding downstream 198449 40077508 ~ 40091201 (-)
AMCG00008028 LOC108233014,LOC100703573,LOC101171829 coding downstream 227677 40051029 ~ 40061973 (-)
AMCG00008041 NA coding upstream 30063 40328731 ~ 40356747 (-)
AMCG00008044 NA coding upstream 95410 40394078 ~ 40415758 (-)
AMCG00008052 NA coding upstream 371002 40669670 ~ 40677744 (-)
AMCG00008055 NA coding upstream 457115 40755783 ~ 40769324 (-)
AMCG00008054 LOC105022343,LOC103467740,LOC106572463,LOC103385599,LOC106567217 coding upstream 521181 40819849 ~ 40828516 (-)
G28036 NA non-coding downstream 12003 40277163 ~ 40277647 (-)
G27949 NA non-coding downstream 442606 39842331 ~ 39847044 (-)
G27927 NA non-coding downstream 498166 39790546 ~ 39791484 (-)
G27904 NA non-coding downstream 525233 39763930 ~ 39764417 (-)
G27833 NA non-coding downstream 833792 39455040 ~ 39455858 (-)
G28095 NA non-coding upstream 329109 40627777 ~ 40632764 (-)
G28110 NA non-coding upstream 361213 40659881 ~ 40663760 (-)
G28119 NA non-coding upstream 365249 40663917 ~ 40667862 (-)
G28139 NA non-coding upstream 449638 40748306 ~ 40750443 (-)
G28190 NA non-coding upstream 684951 40983619 ~ 40984904 (-)
AMCG00008042 NA other downstream 1076 40268272 ~ 40288574 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 785058 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1197755 39088557 ~ 39091895 (-)
G27720 NA other downstream 1233971 39054153 ~ 39055679 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other downstream 1240053 39032787 ~ 39049597 (-)
G28202 NA other upstream 717491 41016159 ~ 41017248 (-)
AMCG00008069 rps21 other upstream 900821 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 1107123 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 1548265 41846933 ~ 41849954 (-)
AMCG00008095 NA other upstream 1784806 42083474 ~ 42089493 (-)

Expression


Co-expression Network