AMCG00008055


Basic Information

Item Value
gene id AMCG00008055
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40755783 ~ 40769324 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008055
atgtacagtgaggTCACGTGGGCCACGGGTGTGGAGAAAGCCCAGGAGTGCAGTCGCGATTTCAAGGGCAATGCTTTGTGCAAAACATACACCGAGTGCCCGGCCCCCTCATGGCCCTCCTCTGTGTGCGCATTTTGTTTTGACTTGAACTGTGAGGAGGGAGCAGGAACAATCCCCGTCGGCAGAGGCACCCCCATCACCAGCCTGCCCGGTGCTCTCAGTCCTGGAGTAGATGACTCTTCCTCGGAGAGCGGCAGTGGGAACGGGCTGCCCACCCTGAACCCACCGGTGGCAGGCGGCGCCCCAGAGGGCGGCTCCTTCGGCGTGGTGAACGGGAACGGTGCGGGGGCCCCGCTGGACTTCAGCACCacgtcgtcctcctcctcctccgaggACCAGCCCGTCAACCTGAGCGAGAGGCTGCCCGCTGGACCCCTGTGCCCCTTCCAGCCCGACCCTCCCGACGGCCTCCGCACCCGTGGGAAATACGCCGGCAAGACCCCACCTGCCGACCTGCGGCTGGACCGCGACATCAGGGACTATGGCAACAAGtccCCTCAGTACAGCTCTGGGAGTTACGACTCGGTGAAGACCGAGGTGAGTGTGTGCCCCGAGGACCTGTCCGTGAGCCGTGCACACACCGCCGACGATGATGACGATGACGAGCACGACCACGACCACGAGGACAGCGACAAGATCAACGACACCGAGGGCATGGACCCCGAGCGCTTAAAGGCTTTCAATATGTTTGTGCGCCTGTTCGTGGACGAGAACCTCGACCGCATGGTGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGGCCATCATCGAGTCCTGCAGCCGGCAGTTCCCCGAGTTCCAGGAACGCGCCCGTAAGCGCATCCGCACGTACCTCAAGTCCTGCCGGAGAATGAAGAAGAACGGCATGGAGACGCGGCCCACTCCGCCCCACTTAACCTCAGCGATGGCCGAGAACATCCTGGCAGCTGCCTGTGAGAGCGAGACCCGCAAAGCAGCCAAGAGGATGAGGCTGGACGTCTATCACGCACATGATGAACAGATTGCACTAGAAAAGCAGAGCGCCCGGGAGCCCGCCACTCTCGCGCACTCCGCCTACTCACTGGCTGCCACGGCCTACTCACAGGACCAGATCTACATCAACGGCGGCCTCAACTACAGTTACCGTGGTTACGGGGGTCTGGGAGCCAGCCTGCAACACCCGGTCTCCCTAACAACCAGCACTGCTCAGAGCAACGGTCCCACTGACCTCAGCATGAAGTCCGTGGCCTCgaactcctcttcctccagcacAAACAGCCGGGGCGTCCCCACAGCCCAGCTCAGCCCCACGGAGATCAACGCGGTGCGGCAGCTGATCGCAGGGTACCGGGAGTCCGCCGCCTTCTTGCTGCGCTCCGCCGACGAACTGGAAAACCTGATCTTACAGCAGAATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008055 True 1458 mRNA 0.62 9 40755783 40769324

Neighbor

gene id symbol gene type direction distance location
AMCG00008052 NA coding downstream 78039 40669670 ~ 40677744 (-)
AMCG00008044 NA coding downstream 340025 40394078 ~ 40415758 (-)
AMCG00008041 NA coding downstream 399036 40328731 ~ 40356747 (-)
AMCG00008043 NA coding downstream 457115 40289650 ~ 40298668 (-)
AMCG00008040 NA coding downstream 529377 40221367 ~ 40226406 (-)
AMCG00008054 LOC105022343,LOC103467740,LOC106572463,LOC103385599,LOC106567217 coding upstream 50525 40819849 ~ 40828516 (-)
AMCG00008056 NA coding upstream 77678 40847002 ~ 40848749 (-)
AMCG00008053 NA coding upstream 99329 40868653 ~ 40875437 (-)
AMCG00008058 NA coding upstream 212572 40981896 ~ 40982690 (-)
AMCG00008063 NA coding upstream 286802 41056126 ~ 41078139 (-)
G28139 NA non-coding downstream 5340 40748306 ~ 40750443 (-)
G28119 NA non-coding downstream 87921 40663917 ~ 40667862 (-)
G28110 NA non-coding downstream 92023 40659881 ~ 40663760 (-)
G28095 NA non-coding downstream 123019 40627777 ~ 40632764 (-)
G28036 NA non-coding downstream 478136 40277163 ~ 40277647 (-)
G28190 NA non-coding upstream 214295 40983619 ~ 40984904 (-)
G28203 NA non-coding upstream 248920 41018244 ~ 41019422 (-)
G28206 NA non-coding upstream 274372 41043696 ~ 41044047 (-)
G28241 NA non-coding upstream 359814 41129138 ~ 41129628 (-)
G28308 NA non-coding upstream 590820 41360144 ~ 41360468 (-)
AMCG00008042 NA other downstream 467209 40268272 ~ 40288574 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 1251191 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1663888 39088557 ~ 39091895 (-)
G27720 NA other downstream 1700104 39054153 ~ 39055679 (-)
AMCG00007990 ppp1r16b,LOC106566117,LOC107558141 other downstream 1706186 39032787 ~ 39049597 (-)
G28202 NA other upstream 246835 41016159 ~ 41017248 (-)
AMCG00008069 rps21 other upstream 430165 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 636467 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 1077609 41846933 ~ 41849954 (-)
AMCG00008095 NA other upstream 1314150 42083474 ~ 42089493 (-)

Expression


Co-expression Network