AMCG00008059


Basic Information

Item Value
gene id AMCG00008059
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40963149 ~ 40975884 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008059
TGACTGGATAGCCAGTTTGAATTAAACCCCCTATTAGGTGCAATGTCCATCCGAGTTAGCAAACCAGAACTCGGGCTATGAGCCTCCTTTGGAGGTGGACACCTGGGGATATGAAGAACAAATCTATGAAGAAGATCTGCGCCGTATCGAGAGACTATTCCAAGAGGCGGACACAGATGGGGGTGGAGGATGAATACCTGAACTACACAGTTTTGGAATACACAGAGAAAGATGCTCTTCATCGGCAGACCCGACCTCTGTACTTCCCCAAGTCATTGAAGATCGTCCCAGTGGGTCACTCCGAGCTGATTGTGAGGCTACAATTCAACCCAGACCAGTCTCCCCAAAGTCGCGAGGCGGACAAGGGAGGTCAGGCAGGTGTTGACAAGGCCCAACCCCAGCCGGGCTGCTACCTGTCTGTCAGCCGAGACGGGGTGCTCAACTTCTGGAGCGAGAACTTCAACCGCCTTCGCGCTGTCAGTCTGGACCATGTTCAACGCAGCCGTGGCGAAAAGATCTGGGTGACTAACATGGTTTGCATCAGTAACCTGAACCTGATGGCCATATCGACGACAGGCCGTGACCTGGACTTCTTTGACATCAGTGCCAGCAGGTGCGACTTGGTCTTCTCCCTCACTGGCCTTAAGAACTACGTTCTAGTCATGGACTACTGGTCAGACGGCAAAAACGGTGTCTTCTCCGTCGGGGATACAGGAGGTGGcattctggttttcatttcctcAGACGTCAATCAGCATGGCATTTTCAGCACTGCCAACATCATCAACATCGGGGGAAAATGCTGCCTCCCTGTGTCAGCACTGCTCAAAAACACGTCCAAGGATTACCAGAACTTCAGAGTAGCTGACCTCCACGGTGATTGGTGTTGTCAGATTCAGTTCATCCCCGAGCTGAAGGCCATTGCCACCTGCTCGGCCTCAGAGGACACTGCCATGGTGCTGACCCAGGTGCCGGAACCGCACACGAAAGGAGTCAAaaaatgtgcttttcctCTGAAGAAGGGAATTCTGTGCTTCGATTACTCTCCGAAGTTTAACGTACTTGTGACGGGGAGTGTGGACTGGATGGTACGGCTCTGGAACCCCTGCACCTCGAAAGCCATTGCCGAGTTGAGTGGACACACGTCAGCCGTCACGCACGTTGTGGTCAACGTCCACGGTGACCGGATCATCAGCATCTCCAAGGACAAAAATGTGCGTGTGTGGGATCTGAAGGAATACGGGTGTCTCCAGAACATACACCCCAGAAGCATACAAATGGGCCACTTCCCCATCTCAGACATTCTCTATAACAAAGCCTCTGACACCCTGGTCCTGGCCACCGACAAGATGGGCGTTCTGCATGGTGCTGAGGACGTGAGAAACAAGGAAGCCACGTCCCACAAACAGCCCTTGTGCTGTGCACTGTACAACAGCAACTTTAAACAGGTGGTGAGCGGATCTCACGATGGTATGGTGATTGTGTGGGACGTCCTGACCGGGGAGAAGGTCATGCAGTTCGTCGTGGGTAATGGGGTGGAGGTCACGGCCATGGCCTTTGACGGCCCCCGGAGACGCCTCATCACTGGCTCCAAAGACGGCTCCATCAAGCTGTGGAACTTCAACAACGGAGCCCTCCTCTGTGAGCTGCCCAAGCTGGATGGCAGTGAGgTGACAGGAATCGTGTACATCAAAAAGAGGATTTACGTCACCGGCTGGAGCAAAAGAGTCATGTGGTTCCTGGACCTGAAGGAGGATGACAGGATAGAGCATCGCCAGTGGAAATGCTACCACTCAGAGGATATCTACTGCATGGATGCCTATCGCAACAAGCTCCTCGTCACGGCTTCCTACACTGGCGACATGGTAGTGTGGAACGTCGACTCCGGCCTGGCCTTCAGCAGGCTCAACTCCCACGAGAGCCCCCGGCCGCTGCTGCCCATCAGAGTGTTTGATGAGCCTTGCGTTCGGCAGGACACTATCAAGACACAACAGGGGTCTGTGGGCACACAACACCCTGCTGCCCCTCCACGCAGGGCCCTGGCCTCAGCTGGGAAGGGAACCAGCCAGACTCACACCAAACCGGAGAAGAGGTGCAGTTCCCAGGGAACCTGTTCTGCGTCAGTAACAATGGACAGTGCAGATACCAGTTCTTTCACCGAGAACCCTTCAGAGAAGACAAACATTGAGAAGAAAATCAAAAGACCAAGCCTGGCAGTAGAGAAGGTGCTGTTTCTGCACACCCGTGAGCGCCACCCGGACTCTGCCATCTTGCTGACGAGCAACGCCGATGGATACATATGCGCCTGGTCCATCGACCCCCGCGGTGGGATGCTGGCAAAGTTCAAAGCCACGCAACACAATGATGCCGCTGTCTGTTCGATGTCCACCGACCTCGAGGACCAGATTCTTCTGACGGGAGACACCAGAGGCTACGTCAAGATATGGGACATCAGTGATTTCTGGAACTGCACTGGAGAAGGGAATAGTTTGAGATTGCCAGACCTCATCCCAGCCTACTGCAGAGTGGAGCGGCCCATAACCCCGGCCTTCCAAAATGAGACCGAGGTGTTGGATGGATGGAGtgtctctctcacccccccaccccttctcaGCTCCTGGAGGTGCCATCTGAAGGCAGTGACTAGCCTGGAGTACGTGGACAGGTTTCAGCTCATAGTCACAGCCAGCTTAGACTGCAATGTCCGACTGTGGAGCATAGCAGGGAAATACATAGGAACATTTGGCCAGGGCCTGTGGAATGTGGGGGTCACCGACACCCTTCCCCTGCCTTCTGAATTAAAGAGAGTGGGCTCCTATCAGACTCTGAAGGTCATCAATGAAGGAACGCGCCCCCACTGGAGGAAGCTGGTCAGACAGAGGAAGCAGAGATCGCAGGTATTTGCTTTGCTTATGGGCAACAAGGAGGCCGCCGCCAAAATTGAGGAGCTGCTGCCCACTGACCCTCGCATCGCCAAGTATAGCAAGGAACAGATTGAGGAAACATGGCATCAGTGGCAGGTCAAAGGGGAGCAGAAAAGCAGTATCCTGGGCGGAGGGTACGTACAGAAGGTCAGATATCACGTACCACCCTCATTTGACCGGAAGGATGTCTGCAACAGATGAACAGAGCAGATGAGGATCTACAAGTCCCTACCCTATTCCTCCCTCGGCCACATCACTTAACCGCCTCTTCCTGAAATGCTGAAGGAACGGCAGCACAAGGCCCAGGAGGGCATTTAGATACGCAGAAGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008059 True 3257 mRNA 0.54 24 40963149 40975884

Neighbor

gene id symbol gene type direction distance location
AMCG00008062 mapre1,LOC100304488,LOC108429292,LOC107681395,LOC107551545,LOC107666429 coding upstream 3598 40950212 ~ 40959551 (+)
AMCG00008061 NA coding upstream 14245 40930112 ~ 40948904 (+)
AMCG00008057 NA coding upstream 40335 40896616 ~ 40922814 (+)
AMCG00008050 LOC106566823,LOC107586510,LOC107701716,LOC107756373,LOC107570968 coding upstream 217884 40724357 ~ 40745265 (+)
AMCG00008049 LOC107707748,LOC107747492 coding upstream 253300 40698024 ~ 40709849 (+)
AMCG00008060 NA coding downstream 17837 40993721 ~ 41013873 (+)
AMCG00008064 osbpl2b,LOC107727008,LOC107666451,LOC107681391,LOC107705692 coding downstream 135172 41111056 ~ 41118960 (+)
AMCG00008065 adrm1,LOC103354471,LOC107727009,LOC105894265 coding downstream 148019 41123903 ~ 41128874 (+)
AMCG00008070 NA coding downstream 374544 41350428 ~ 41356833 (+)
AMCG00008077 oprl1,LOC106572940,LOC107681404 coding downstream 582536 41558420 ~ 41563189 (+)
G28143 NA non-coding upstream 201516 40761266 ~ 40761633 (+)
G28141 NA non-coding upstream 204139 40758698 ~ 40759010 (+)
G28140 NA non-coding upstream 207173 40751475 ~ 40755976 (+)
G28032 NA non-coding upstream 685462 40277414 ~ 40277687 (+)
G27973 NA non-coding upstream 902944 40051890 ~ 40060205 (+)
G28174 NA non-coding downstream 1770 40977654 ~ 40978428 (+)
G28173 NA non-coding downstream 40483 41016367 ~ 41017248 (+)
G28178 NA non-coding downstream 42360 41018244 ~ 41019386 (+)
G28234 NA non-coding downstream 153252 41129136 ~ 41129628 (+)
G28263 NA non-coding downstream 223569 41199453 ~ 41201854 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 241404 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 715911 40241312 ~ 40247238 (+)
G27974 NA other upstream 903763 40056632 ~ 40059386 (+)
AMCG00008020 NA other upstream 1128197 39817027 ~ 39834952 (+)
AMCG00008010 NA other upstream 1417542 39540220 ~ 39545607 (+)
G28395 NA other downstream 1016975 41992859 ~ 41993377 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 1437748 42413632 ~ 42437228 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 2129829 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 2168921 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 2316712 43292596 ~ 43305530 (+)

Expression


Co-expression Network