AMCG00008061


Basic Information

Item Value
gene id AMCG00008061
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 40930112 ~ 40948904 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008061
ATGTGCACAGTGCCTCCCCCGGGGTCTCACACGCCCCCCAGGCCTCTGTGCCACCGGAACAGCGAGAGCACAACGTGGGGGAAGATGGCAGTGAATGTTCGTCTGACATCTGAGAACTCGGATAAATTCAATCGTTTTGAGCTGTTGTCATGGATCAATGGATCACTGGAAACACAATTCATGAAGGTCGAACACACATGTTCAgGTGCCATCTATTGCCAGTTGATGGACTGGCTGTTCCCTGGTTCTTTGAATATAAAGAAAGTCAAGTTTCAGGCCCATGGGGAAGTTGAGTACATTCACAATTACAATCTGCTGCAGTCAAGCTTCAAGAAAACCGGCGTGACCAAAGATGTTCCAGTACATAACTTAATCAAAGGGAAATTTCAAGACAACTTCCAGTTTCTGAAGTGGTTCAGGAAGTTCTTTGATGCTAATTTCTATGGCCAAGTGTACAATGCTTTAGCAGCGCGTGATGGACAACTGATTCTGCCTGTGCATGATGTACCTTTTTCTCCTCAAGCTGTCAAATCCTTTGGCAGCCCTAAACACACTGACGTGAAAGTGAAAATTGAGTGCATATCCGACGACGAGGCCTACAATCAGAAAAATAAGCGCATCACCTATCTTGATGTCTGGCAAGAGACCTTTTGCTGGGTTGGTCCAAGTAAACTTGGGGAGATCTATGCATACTGTGAATTCTGTGACCTCAATTTAACCATTCATCACAATGGGAAGATGGACTTGAAGCGACACCAGGAATCCAAGAGGCATCACAGGAACATGAAGAAAAAGGCTCCCATGGTGAAGACGAACAGCAATTTGAGTAATGGCACAATTGACTCCTTCTCCTGTGGGGTCAGCACTCTGAAGTTCATTGGGAAGCACTGCACAAGTGAGATGCTTTCAAAAATGGGAAACGGAGCCAAAGTTTCATGCCGCATTGCAAGGTATGTGCTGGGGTTCAAATATCCGAAAGACATTGCTTCCATCTGTACCCAGACTCCGTATTGCGTTTATCTATACCGCAATATAGATCTGGGAGATGAGGAAAAGGCTGATGTTGTGCTAGTGGGATATTACGACGAAAAAAATGCGAAAAACAGGCTGCGGCTTGTGGATGTTGCACAGCCTAAAGCAGAGACCGGTGCATCTGTGTCTGCCTGCCTTGTGGATACACTGAAGAAGTTTGACATACCAATTGGGAACCTCACTGCTTTCTACACAGACTGTGCTCCTGAGCAGGGTGAGGCTGTCCTCTCCAGGCTGAAGGAGATTAACCCTAAAATTATTCACATGGGAGGCCTGTACCACCTGGCCAATGCCGCTTGCAAGTCTGGAGTTGCGGCTTCTATTATGAAAGTTGATCAGCTCATTTCTGACATTCACAGCCATTACTTCACCTGCTCAACAGCCAATGGTAATCTGAAGGAACTCTTCTTGGGCACTGAGCCTTACGATGGGGCCATTCCCGCTTCAGCACAGTGCCTTGTGTTTAGTAAAATCGTCCGGAAAATAAGTGACATGTGGCCTGATCTCGTGACATACTTCCAGTCCCGCAGTCTGAAGGACGACAAGGTCAAGCTCATCCGTGAGTGCCTCCAAATCCACCAGCTGAGGTTGACCTTCTTGTTTATGAGCCACGCACTGGAACCCCTCTGCAGTTTCCATAGCAAATTGGAGAAGCAAGGCAGTGACGTTGCACAGTTGCTGAAAGATGCGAGCAGCCTTCTCAGGTCTTACACTACCAGACTTCTCCTTCCGGAAGCTGTAGTTAAACTGTTAAAGGGATGTGATGCCAAACTTCTGAAAACTCAGAAGAATTACCTTCAGGAAAGTGATCTGAACATTGGTCCAGAGGTGGAGGAATACCTGGCACAGCACGGGAAAGACCTTGGTGTTGCCTCGGACCGTTTCTTTAAAGATGTCACCTCCTTTTACACTGCTATAACAACTTGTATCATTCAGAATCTCCCTTTGCATGACACGTTGCTGAGAAACATTTCCACTTTATTAAGTCCTACCGGCAAACTAAAAGTCACCGGCAAAGTAGTTGTGGAACTTGCCACCCAGCTGGGCCTCTGCAGAACGCCTGAGGATTGCAGTCAGCTGACAGAAGAATTCCTGGAGTACCAGCTGTCGGATGGCGATGAAGCCCAAGGACAGCACCCCACGGCACCCCTTTTGCAGTACTGGAGTGCTGTTTTGAGATCCACCACATCTGGAAATGTCGGACAGCTGCCCATCTTCCAGAAACTGATCCTGACTCTGCTGTCTTTGCCGTACCCCCCTTTGGAAGCCAAGAAGGCCTTTGATCAGGCGGTGGAGAACGGGGACGCCTCCCTCCTTGACGACACACTGACCGAGAGTGAGCTGGATGACACCAGGGACTTGGACACCAGTGTGCTGTCAGTGGGGGACACCAGCTTGTCGATGTCCAGCCCGCGAAAGGGGGTTGCTTGCAGCTCTTCAAaTCTTACCTGGATCAagccctgtgctgtgctgttggaAAAGATGAACCATCCAGCTGAGGAAAAGCCGTCATCAAATGAAGTCTTTATTGAAGATGACATCATTTGGACTAGTACAACTCAAGAGGGGACAACTAGGGGGATTTATGGGTGGGAGACAAGCCTCCGACAGAAACCTCAAGCTCGGAAGGTCTTTCAGGCTGGTGTGAACCCCTCGGAAGATCCACAGAAAGACGACAACAGTAGCTACACAAAAAAGAATTTAGAAAGCCCTCTGATAAAAAAGGAACGCCGCACTTCGACTCCAAACAAGCCACCCAAGAAATCCTACCCATACCTGGATGGGAAGGGGTTCTTGACGGGATCGCTGGTTTGGGGGAAGGTCAAGGGCTTCTCCTGGTGGCCGGGCCTGGTTATCTACACAGAGCGGTTACTTCCATTCGCTGCGTTCTCCAAGTGTTTCTGTAACGTCTCCTTCAGCAGTCTGCCTGCTTACAAGGATGCTATTCTCCAGGCACTCGagCTGGCCAGTCAGAGAAGTGGGAAGATATTTCCACCCTGTAAGGCGGACAGTAAGGATGACAAACTGAAACCCATGCTGGAGTGGGCCGTTGAGGGCTTCGAACCAAAGGGACCCGAGGGCTTCAAGTCCCCTGATACGCCTGCCACGCCAGTGAATAACAAGCCTGACGTGGTGGAGTCACCAGTTCAGGAGTACCAGCCCCCAgccaaaaaacagaaatacatctgCAAGAATAAAAGCGTCGTTGAGCAGGACTACACAAGAGagcAAATGGTCGAGGAAGTTTTGTCCAAAGGAAGAAATATACAAGAATTTTGTCTCTCTTGTGGGACGTCACAGACTGAGATATGCCATCCCCTCTTTGAAGGAAGTCTCTGTCTGAAATGCAAGGATAACCTGATTGAGACCCTGTACAGATATGATGAGGATGGGTACCAGTCGTACTGCACAGTATGCTGTGCCGGGCTCGAGGTCATTCTGTGTGGCAATGCCAGCTGCTGCCGGTGCTTCTGCGTCGACTGTCTGAATATCCTGGTGGGGCCAGGCACTTTCGACCGACTGAAGGAAGTGGACCCCTGGAGCTGCTACCTGTGCCTGCCCTCACATCGCTACGGCATCCTGAAGAGGAGGCAGGACTGGAGCATCAGGGTGCAGGAGTTCTTCATCAACAACAGCGCCATGGAATTCGAACCTCACAGAGTTTACCCATCAATCCCTGCCAGTCAGCGAAGGCCCATCAGGGTCCTGTCCCTCTTTGACGGCATTGCAACAGGCTATTTAGTTTTAAAGGATCTGGGTTTTAAAGTTGAGCGATACATCGCTTCAGAAATCTGTGAAGACTCCATTGCAGTCGGGATGATCAAACACGCAGGGAAAGTTGAACATGTGAATGACGTTCGAACCATTACAAAGAAGCACATTGCTGAATGGGGTCCCTTcgaccttttgattggaggaaGTCCTTGCAATGACCTTTCAATTGTGAACCCAGCTCGAAAGGGCCTTTTTGAAGGCACTGGAAGACTCTTCTTTGAATATTATCGAATGCTGAACATCTTGAAACCAAAGGAAGGGGACGACAGGCCCTTTTTCtggttatttgaaaatgtcGTGGCGATGGGGACCCGTGACAAAACCGATATTTGTCGATTTCTAGAGTGCAATCCAGTGCTGATAGATGCCGTCAGAGTGAGCCCCGCACACAGAGCGCGCTACTTCTGGGGGAACCTCCCTGGAATGAACCGGCCCATCGCGTCGTCTTTGAACGATAAAGTGGATCTCCAGGACTGTCTGGAACATGGAAGAAAGGCAAAGTTCACCAAAGTCCGTACCATCACTACACGGCCCAACTCCATTAAGCAAGGAAAGTCCGAGATCCTTCCGGTTGTAATGAATGGAAAAGAAGATAATCTGTGGTGCACAGAGCTAGAGAAGATTTTCGGCTTTCCCAAACATTACACGGACGTGAACAATATGGGCCGTGGATCTCGTCAGAAGGTCCTTGGGAGATCCTGGAGCGTCCCAGTAATCCGACATCTGTTTGCACCCCTGAAAGACTACTTTGCCTGTGAATAGCTACGACAAtgcaagcacacaaacaaaacctcAAGGATCTTAGGGCTACTCTTTAGAGTTTTGTAGCTAGGCAACCGCAAGAAAGAGAGTGGCTGAGGGGCTGAGGGGCACGGGGGGGACTAGTGAGCGctcccctctccctgcctccaaaaaaaaaaatccttaccAACGTTTCACCAAACACCAATTCACAGACAGGTTACTGTTTGTATGATCTGATTAGGGTCAATTATGAAagctatttaattttgtttgttctagTTGCCCCCCTGtcccaggtttttttttttcgatgaCTTTTTTTACTTCACTGGTCACATGATACAGCACTGCAactttttgtttgcagtttttgttgtagtgtttttttttttcttctacacacagtatttgaaatgcatcttaTTGTTATTGGAAATGACTGTCTAATCTCGGCCTACCTCAGTGTGGTGAAATCCTGTGTTCCAAATAACTGGAACTCTATTTATAATCTGTCCACTACAAGTATTTCATTTCATAGAGTGTGGGTCTGTTATGTAGACTGGGTGCAGTGAATTctccaatttaaatgtttacctctcaatctgtttttaaactatttaagaTGACGGTTCTTGTGCACAGGTGGCTAACTTTGTGccctgaatgttttaatttgaatatcaGAAAATAATCTAACTGACAGTTTTACAAACTCAGAGCTGGAAGCCCAGTTCAGGTTAACACTATTTGCTCATCCTTATCACCAGAACTGGGAGTTCCTGGTTTTGTTATAAAACTAATCAAGCAATCTGTAtgaatggggtgggggggatttctCTCACAATTAATCGTTTAATGACTGTCTAATCatgaacaaatttaaaatgttgtatttgtgtttctaaGGAAGTTGATGCAACTGTCACTGATTTTTGTGGGAACCCCGTAAATAAACCCAAAGTAAATTAGGTTTTAAGAATACTTTATAAAGACTGAGCATCTGACATTTTAGGTTAGACATTACTCTTTGGAATTTGTTCAGTCATAAGATGCCATAAGATGTTGGAGTTTAATTTCATAGGACAGACTTCATTATATTGTATAAGTGAGAGAATTCTTTTTATGTATTCACAATCATCAAGTGATGAGTGGAAATCACACGTCAAATTATGCATGACTGGATAAAGCCCTTCTTCATTTTAATCTTGACATATGAAGTTGTTCCCCAAGAAATACACACAGTGATATTTGGATTATTTAATTCACATAAGACAATGATTCTACAAGACATCAAGAAAAAATAGGGATGGCTgattataaaaaatactttttatacaattttaagtGCCTGCCAtgtgtaagtaaaaaaaaactgtgcacTGTGAATTTAAGATGCATGGTTTAGTATATCCTGGCAGCAATTTTAACTATTCAAAGGATCTTCTCCTGTGGAGCACCATGTGTAATCGCCTCACACCAGCATGTTAAGAGCATTATTTCCTATTGTATTTAGCATAAAACTATTATGCATTACCATCCTGTCTTAAATATGAAGAAtgtctttttctgccatttttaaGTATAACAACACTTGacttttataatgttatttttaaacattttgtttttgccaacCAGGTTTTGGGGGAAATTGTGCATTAAGTAtcacttaattgaaataatttgtcgGGTGTCCATAGCCTGACCATTCAGGGTAGCACGATTCTGcctgaatacatttaacatgacTTAGGTACTGTATAGATTCAGTATTaagctttttgttattttgtttacctGTTTGCAGATTTTTAGAgcctatttttttgttttgtttgtcccCCTGCCTTATGGGCAGCATAATTTCAGATCCCCATGCAATGCAATGTTAATACTGTAACTGTATCTGGTTCTGTGATGCTTTCTTGGAATAACATGAAAGGGgctttttgatattttaagtCCACATAAATCAGGTGCTAAAAACAACGACTATCTTGAAACAATATGCCACTGTGCCATAGCAAAGAGATCTTTGTAGGCCTTTCGGTTACTGATGTCTCTGTACTGTTTTTACAATACCTCATAGGAATTTGTAAGGGTCTAGGGTATTTTATAATCCTATTGGTGCTACGTTTTTACTTTACTGTTAGACCTTTTTCAATCTGTGTacggttgttgtttttttgttcgtttttttggAATGGGGTTACATGTATcatcaatgaatgaatgaatgacaatGTAATGTCTCGG

Function

GO: NA

KEGG:

id description
K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008061 True 6807 mRNA 0.45 26 40930112 40948904

Neighbor

gene id symbol gene type direction distance location
AMCG00008057 NA coding upstream 7298 40896616 ~ 40922814 (+)
AMCG00008050 LOC106566823,LOC107586510,LOC107701716,LOC107756373,LOC107570968 coding upstream 184847 40724357 ~ 40745265 (+)
AMCG00008049 LOC107707748,LOC107747492 coding upstream 220263 40698024 ~ 40709849 (+)
AMCG00008046 tm9sf4,LOC107690854,LOC107681873 coding upstream 269066 40649143 ~ 40661046 (+)
AMCG00008048 LOC107747493 coding upstream 282946 40632644 ~ 40647166 (+)
AMCG00008062 mapre1,LOC100304488,LOC108429292,LOC107681395,LOC107551545,LOC107666429 coding downstream 1308 40950212 ~ 40959551 (+)
AMCG00008059 NA coding downstream 14245 40963149 ~ 40975884 (+)
AMCG00008060 NA coding downstream 44817 40993721 ~ 41013873 (+)
AMCG00008064 osbpl2b,LOC107727008,LOC107666451,LOC107681391,LOC107705692 coding downstream 162152 41111056 ~ 41118960 (+)
AMCG00008065 adrm1,LOC103354471,LOC107727009,LOC105894265 coding downstream 174999 41123903 ~ 41128874 (+)
G28143 NA non-coding upstream 168479 40761266 ~ 40761633 (+)
G28141 NA non-coding upstream 171102 40758698 ~ 40759010 (+)
G28140 NA non-coding upstream 174136 40751475 ~ 40755976 (+)
G28032 NA non-coding upstream 652425 40277414 ~ 40277687 (+)
G27973 NA non-coding upstream 869907 40051890 ~ 40060205 (+)
G28174 NA non-coding downstream 28750 40977654 ~ 40978428 (+)
G28173 NA non-coding downstream 67463 41016367 ~ 41017248 (+)
G28178 NA non-coding downstream 69340 41018244 ~ 41019386 (+)
G28234 NA non-coding downstream 180232 41129136 ~ 41129628 (+)
G28263 NA non-coding downstream 250549 41199453 ~ 41201854 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 208367 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 682874 40241312 ~ 40247238 (+)
G27974 NA other upstream 870726 40056632 ~ 40059386 (+)
AMCG00008020 NA other upstream 1095160 39817027 ~ 39834952 (+)
AMCG00008010 NA other upstream 1384505 39540220 ~ 39545607 (+)
G28395 NA other downstream 1043955 41992859 ~ 41993377 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 1464728 42413632 ~ 42437228 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 2156809 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 2195901 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 2343692 43292596 ~ 43305530 (+)

Expression


Co-expression Network