AMCG00008063


Basic Information

Item Value
gene id AMCG00008063
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41056126 ~ 41078139 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008063
ATGTGGAGACTCCTGGCTGGAGCAGATGGCCGGGCTTTGGGCCAGAATAAGCCAGCAGATTGCATCAGCTTGGCGGTGCGTGGGAAAGCCTGTGGGATTCGGGAGCTGGGGGTGTGCGTGTGGCTGAAGAATGAGcacagggaggaggagagggagatggacGCCCAGCCCGAGGCAGCATTAGCTCCCAGCTCTCTGAAGAAAAGGGGAGCTCGTGTGGTCAATAAAACAGACAAGAAAACATCCCCTCAGGAGGACAGCGCTGACATCAAGTGCCAGCTGCACTTCGCTAAGGAGGAATCAGCCCTCATGTGTAAGAAGCTGACAAAGATGGCCAAGGACAACGACAGTATGAAAGAGGAGCTGGTGAAGTACAGGTCACTGTACGGAGACTTGGACATCTCACTCTCGGTGGAGGAGGTGGCCGACTCCCCGCACACCAGGGAGGCGGAGCTGAAAGTCCATCTCAAGCTGGTGGAGGAGGAAGCCAACCTCCTGAGCCGGAGGATAGTGGAGCTGGAAGTGGAGACCCGGGGCCTGAGGGCAGAGATGGAAGACATGAAAAGCCAGGAGTTCCAGGGCCATCTGGTTATGGCTCCCGGCTGCTATGGGGAATCCAGGGAGAGCATGATGGAGCTGAAACGCCACCTGCAGTTTGTGGAGGAAGAGGCCGACCTTCTGAGGAGGTCGCTTTTGGAGATGGAGGAGCAGAACAAGCTGCTGATGAATGAGCTCAACAAGTACAAGTCAGAGCACGACTTGGACACCACCATGTCAGAGGACAGCTGCTCGGTGATGAGTGAGCCCTCGCAGGAGGAGCTGCTGAACGCCAAGCTGCAGATTGGTGAGCTCAGCGGGAAGGTCAAGAAGCTCCAGTACGAGAACCGGGTCCTGCTCTCCAACCTCCAGCGCTGCGACCTGGCCTCCTACCAGTCAACCAGACTCTCCATGGAGACAGACGCGGAGGCTGGGGACTCTGCTGAATGCGTCCCGAGCCAGATCCGGAGAGAAGGCCCTATCGGAGGGGAGAACGACTCCAGGGAAGATCAGGAGAAGGCGACCATGATCCGGAGCAACAGCAACCCGGACAACTACGAGGTCTGTGGCTCCCAGTGCCTCAGAAGCAAAGACTTTGATACTCTGCTCACCATCAAAGATCAGGCCGGACTCGTTAGCAAAGCCATCGAACTGTTGATATCAGACTCCAATGGGTTCTCATCCTATCCGAAGATCTGCCCTTCCATTGATTCCTCAGAGCAGGCTTTGAGCGACAGCCTTGATAGGAACGAGGCCTCAAGTGACTTAAAGCTGGTCAGTGCCCTTAACAACAGGCTGAGTGCCTTGCAGAGAGAACTAACCACCTTCATGGACAAGGTAGACAACCTCGGGGACTCAAGCAGGGAACAAATTGAAGGAGCCTCGCCGCTACCTCTTCTTTCAGAGTCAGGGAGCTTTATATCCACCATGCCTTCCGTATCCCAAGACAGCTCACCAGATGGCCTAAGCAAAGAAATCAATGCTGATCAGAAGCAGCCTGACTTTAGGGACCAATCAGAGTGCCAAGTTGGAGGTCAAAGCCAGGGTCTTCCAGAGGTGCCCCGGAAAGGCACAGAGGGAGACGACAACAGAGACAGCAACAAAGACCTCAAGTGCTACGGACGAGATGACAAGGAGACTGATACAGCCAAGCACGTGGTACAGATCAGGGAGCTCCAGACTCTTCTCTCGCAGGCCAAGGAGAGCATCCAGGGAATGCAGGAGCAGCTGTCCCAGGAGAGAGAAGCTCGCAGGGAGGACTGCGAGAGCTGCTCCCAGAAACTCCTGCAGCTGAAAGAGGAGCACCAAAAAGCCCTGGTGCGCCGTGACTTCGAGCTGCAGAGTCTGAACCTGCAGACACGACTGCAGCAGAAGTTCTGGAGCCAGGAGAGGAACCTCATGGTGCAGGAGTCCCAGCAGCTCAAGCAGAGCCTGCTCCTGCTCAACCTAAAGCTCAGGTGGTTCCTGAAGCAGTGGAGACTTGGCAAGAAGCTGGACACTGAGGGAAAGGACATTCTGGAGGTTAACAGTGTGAAAGATCTATACATGCTTATTGAAGAGGAAGGGCTGGCTGCTCACCAGCTCGATAACAAGACGGCCACCGTCGATGACCAATCCCAGAGCTCGACAGCGCTTACAGACAGCCTCGCTGACAAAAACTACAAGCAGGCGGGCGGGCTGGGCGGCGTGCTGGCAGACCTGAAGGAGGCGCTGCGGGACCTGAGCACAGAGCTGCGGGAGGAGAGTCACGGCTCTCAGGAGCTCACGCAGCAGTTCGCCAAGGCCAAGGCCTCCTGGGAGGTGGAGAGGACCGAGCTGAAGTGCCACATCACCCAGCTGGAGAGCAAGGCTGGGAAGACGGAGAAAGACACGCCAGACCTGAAAGCTGCCCTTAAGCGAGAGCGGGAGGAACACCAGCACCTCCTGGCTGACTCTTACGCGGCTGTCATGGATCTCACCAAACAGCTGCAGATCAGCGAGAAGAACTGGGGCCGTGAGAAGCTGGAGCTCCTGGAACGCTTCAACCAGGAACGGAGCCAGTGGGAACAACGCCTCCGAGACGCCCAGGCGAAAATCAGCCAGTCTTTGCATGACAAAATGTCTGAAAAAGAAACGTCCTCAGACGCAGAAGCTCAGGGAACAAATTTACAGAGGACCAAATCAGTTTCATCCATGTCAGAGTTTGAGAGCCTTCTGGATTCCTCTCCCTTCATCCCTGGCCAAGACAACAGTGATGCCaacaaagagaagaaaaccCAGCCTAGCTCACGCACTGCCTCCAAAAACCTGTCTGACCTGGGGGAGTTTAACAAGAAGAACTGGAAGTACCTAACAAATGAAATGGCCCTCTATGATAAAACTGATCCCTTCAAGACCTGGGACTGTCCAACAATGACCAGCAGCTTTGCTGGCTTAGACTTGACCCAGAAGTGCATACAGAGGAGTTACACAGCACCAGACAAGACTGGAATTCGGATCTATTACAGCCCCCCAGTGGTGCGAAGGATGGAAGCCTGCTTGtcaaagggaaaaaaggagGAGAAGATGATGGCTGAGCCTGGCTACTTATTTACCACCGCAAAGCTCCAAGAGAATGGAGAATCACAGAGCTCATCAGACAACACCTACAACAGATGGCTCTGCAACTTCTCCAAGCAGCACAGAGACCTCCTGGAGAACAACTCCACAGCAGCCACTACAGCTGTGCTGCCCGCACCCTTTCACGGCCTGGAAATGTCTGGCAACTTGAGTGACGACATGAAGGAAATGACCAATTGCGTGAGGCAGGCCATCCGCTCCAGTTCACTGGAGAGGAAATGCAAAGACACTGCAAGCCAGACTGTGGGGGTTACCACCACGGGGACTCAGACCACACAGTTTGTCAGCGTTGGACTACAGACTGAGGGCCCAAGAACCAGCCTGCACACCAAAAGCTGGTCACCCAGGAGCTCTTCACTGATGTCAGCTCGCAGCAGGCAAATCTCCACATCCTTAGATAAGGTGCACAGGATTGAGCGTCCATGCTGCTCACCAAAGTACGGGTCTCCCAAGCTGCAGAGAAAGGTGTCAATGTCATCTTCGAAGTTGGACAGTGCCAAGGACAGGAGCCTGTGGAACCTTCACCACCGGGGGCAGAATGGGTCAGCCTGGGCCAGGTCAACCACCACAAGGGACAGCCCAGTGCTGAGTGGCCTCAATGACGGGCTCTCCAGCTTGTTCAGCGTGGTGGAGCACAATGGCAGCACAGAGTCGCTGTGGAAGGGAATACCCCAGGAGAGCAAATCCAAGACTGAAGTCCCCAAGTATGGCATAGTCCACGAGTTCTTCCGAAACGTCTGTGGCAGGGTACAAACACCCATGCCCCCAGCCGACAAGCAACCTAAAGACCCTGCCACCCTGGAAGATGGCAGCAGGAAGCCAGACTGCTTTGCTGCTGCCTCAGTGGCAGGCGCCCAACCCGACCACGTGACAAAGATCATAAACAAACGTCTTCTGAAGCAAAGCCTCAGAGACGAACAAGCCCACGGCATCAAGGACGCTATTGCGAGAGAGATGAGCATGGCATCCAGTGCACATGAGGACGCTGCCTGCGACTGCACCTCTCAGTCACTCACGTCTTGTTTTGCCCGTCCCTCGCGGTCGATCACACGCCACTCCCCTGCCCAGTGTAAGACGCGCTCAGTGGAGGCCGGGACAGCGGAGGAGAAAGGAGACCCCCCTGAGTGAAGGGAGCGCTGGGGACGACAGAGTTGCCACAGAACCTGCTGCCAAGGAGGAGGAATCCAGACTTTCTGAAGCCACTATGTTCACAAACACCCAGcagcaaaaacagaagaaaaatcaaagaGAATGTCTCCACACGTTTCAGAAACTGTTGTTGTTGgattttgtttgtagtttttgtaCTGTATTCCTGTGTTACTCATGCCAAGATTCCCACAGCATTCCTGTTCATATTTCAGATAAAGGGTGCACAACGTCTTGGACTACATTTCCTTAAAATGCTTCATGAGAATTTCTCTGGTCGTCAACGATTCCAAAACTTGATACATCCACACCTCAAAAATCGCAGTGATACCAGTTTGGAGGAGCTAGGTCTTATTAAGAGAATAGCTCTACTACTCTGGGGATTCATTTCTGTTTGCAAAGATTTAACTCACATGTTGTTTAAAGAATAATATGTTTCAATCGATATCTTATTAAATCAGTGTTCGATATTCATGGGACCTCTTCTAGACAACTGCCTTCATTCACTTTGTCTAGGAACCGCCTAACacactaattaaattaaactttaaaagaaGCATTCCTTTGGACACATACGACAAACTGTGTGAAAAGGGACCCatcattcttaaaaataacttgaataaGATAGGATAGTTTACAGGACTTCTACTGGATAGATATCGCAAATCCTTGGAAGTTGATTCCCTCTTTTCTGCTACTGGAGAAACATGCCTTCTGTCTGATGTACTGGAGTTGAATAGAATTAGTTTGAGACAGTAAATATAAACATACCCAGGACCAGCTCTGAATTAACGTTCATATTTCTGTGGGACATGTTTAGGGAACTGTAGAATGTCTTGATGTCAAAACATAGCATAGTCAGGCACCTCAGTTGCGTGTGCGTGTTTGATCACGCGACGTTGTTAACATACTAGTACGTTCTGGTACCATTTTCTTGAAAAAGCCATCAGAACCACGTACTGGCTGTAGCTTGAGACTAATCTAATTTATTTCTTCTTGTCTCTCCACCCCCACAGTCGAGACTTGAGTATGTCTTTCTACAGATCCGCTCGGTAGTAGTAGAAGGTAACACAAGATTAAGCTTTTCCATGAAAAAGAGCCCGTTTCAAGTTGCTACTTGCAAGAGTGTTTTCCACACTTTTTGCACAAGCCCTTGTCTGTCCTTCAATTAACTCTCCTGTAATTTCCCAAACGCTTAAGGttacttaaaaatacaacaaaaataaaaacacaagacagCGTTCTCTCCAGATTCTGACAGGAGAATGTGATGTCcttttctgattatttatttttatttggtggtatagttatatttgttttctgttgatatttttaaatatcttttattttacttgaaataTGAATGTCATCTTTTGTTCTGGCTTGACATTTTTCCTGTTACATCATTCTGAGTCTACCTCGTCAGACTGAGAAAGCATCACCGTGTTTATCTCAGTTTGCAGGACACCTAGCCTCAGAACTGCGTGGCCATCACAATATGACAATAAAATATCCAGgaccaagtttttttttcttttcgttttttttttttcacaaaagcCAACGAAATAATGACATATGCTGAATTTTATTTCCTACTGAAGAACTGaaactatatttgtattattttgatacCAAGggaattattttcaatttaaattattgttgtttttataaacacacatatgtCTACTCTCAATGGTGCTGGACAAGCAATGTAGGTTAAACTATGTTGCATGTGCTTTgaagcaaaataattattttttaaatatcaattgtTTCTACAGTGGCTTCTAACCCTATACAACATACATGGATGTACACTGTATACAGCATCACTATCAGACTTGATTTTACTGCAGCTCATACATGAAGTCTAAATCAGTAATGCTCTGCAACAATTCACAATATTACTTTTCTAAAAGTActgtttaacatttaatatattcatttcaaaatgccTTGTGGGTAGATGATATTCAGTGCATTTCACTCTGTACAGACGTCTGAATTGGTTGTTCTTTTGTAGTTCTACTAAATAagataaatacagtactgtgctcaTTTAAGGAGGGAATatacaagtttattttatatatgaaaaaactGCAGAACTACAGGCTAACAGTTactattataattgttttttctaatgttaattattttataattttgtattttttaatttacctaTTAAAAAGGAACATAGCATaacttattatttatgttatggATAACTATTTTACTACAAATGGAAGGGAAATCAGAACTGGAGGTACATTATTTAACTACAAggtaaagtttaaaattaaattgagtacagaaaaataaaagccaaaACAATGGCCTCAAATTAATGTTGCACATATTTCCTGATGCCCAGAAAGTACAAGATTACttcttacattttgtgaattaGGCTAGGAGGCAGAGTAAAGTCAAGACTGTcgaaacataaaataatcatcGTAATTTAGGGTGCTGCCTTTGAGTTGTTGCTACCACTGCTACCTCATTCCCTTTCCTTGATAAAAGCAACCTccccatttatttttcctgaagTCAAACGGAAGTCATTTTTTCAGAAGCACACACGTGCCTTTATTATCTTCTGTAAAATTAAGTTTAGCACTTTATACAAATACCCTCATCTGCTGATTTCCTGTGTGACAGTTTCTTTCCCTGCTATTGTGTTACTGGGCTTTCTTTCTCTTGTCAATCCTCATTAACGTCAGAAATAAAGAGATTCataaggaaaagaaaagcagtttgaCACATTGCAGAGGCCTGGATTTTCCAGGATGCTGCAGTGGGAGCTGCATGGGAATGTCAGTGAAATCCCtaataaaacattgttgcaTATTTGTAATAGTGACttttttttacccatttatatgGATACATTTAGGTTAATATATTGGATATGCTTTGAAATACAGACACTAAGTCTCactacacatacactcacacacatacaggtaTAGTATATTTGAGTCTATAAAATAACTCATCCTATAACAAGGAAGTGATAGAATACATTCACCTTTGACCTTCCATTACCTAACTTCTCATCTTTTCACAGAATTAGAATTGCAAAGATCCGAGATAATGTATTATCATGTACCTGTGTTTCAGATGCATCTCCAGTGTATTTCCTGTCAGAGTAAATGCTAAGGGTATCCTGCCTACAGTAGTATAGACTTGGACAGTGTAAGGAAATGAGGGCAGTTTAAACCTAGGAAAGGGAATGCCGTAGTGACAGCTGTTATAAAGTTCAGCCGATCCTGTGGGAACGATCCTGTCTGCAATTCAGTTTATACCCAGAATGACTGAGAACAGGGGATGGATTCTGAGTCAAAACACAACGTCAAAAAGTGGCCCTGATGGAATCTCCTCTTTTTGAACACATGTAAATGACCAATCTGGTTTGTTAACCAcctttttttctaaatattgtgtaaaaaagaaaaagacaaaaaaatatttaaaaaattcccccaccccccaaaaaaatgtttttaaaaaacattgtaaatactTCAGAGTTGCAgccttttattgtttattgatttttttttgtaatttgagtTGGTGTtgcatcattttaaatcaaaacagctgtttttgtattaaagcCTTTCCTATCAATCCAACTGAGGCGGCGACCTTGTCTTTAGCAAGGCACTGTACTGGAGCCATCAGTTTTGCTATTCCCTCTCCGTATCATGTGCAAGATGTACACCCTGCAGAGGGCTGTACTCTGGAAAGTACTATGTATTGGGCTTGGTTGTAAAGATCATTGAGAGCATTcaaaatatacacagtactCAAGTGTGTACACGTACGACTTTTCTGTTCCCACCTACACACTCTGGCTGACATTTACTTATTCCATATTTTCTATTCACCCGACCTATGCGTCTCTGAGTACAATCGTTTTTAAAGTACGATACTGACCTAGAGGCAtaatattcagaaatgtattgatCTAAAATGATCTTTGTTGCACAGCCTTAGCGCACCGTTCCACCAAGTGTGCTTTACATAAACTTGTGCCATGTCTTAAACACTCTCATAAATTTGGTTTAGGTTTCAGATTATCTGGTAGACAATTTTAAAGATGTAGCTAtacttcaaataattatttttagttttcattgttaatatttgctaaattatttccaaatgcctgtacattttccttattttaatattttggctCTACGCTCCGTAATATTGTaacttaaacaaatataaacataatttatactCTTTCTATCCTTGCATAGAAAGAGCTGAATGTCTTTGATGAGTTTAAGCCTCACTGTCGAAGAAGCATATTAGCCCTCTccttcacagacagacacaaacatttctgtaaataagATTTAAACTCTAAACTAGACTTAGGATTGGGTTATGTGTTGGGGAAGGGTCTTTTGAACTGTGAAATTTGTCAGCTCAAAGATCATTGCTTATTGTTTGTCATTGTTCACAATAAATGTTCATTGCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008063 True 8806 mRNA 0.45 13 41056126 41078139

Neighbor

gene id symbol gene type direction distance location
AMCG00008058 NA coding downstream 73436 40981896 ~ 40982690 (-)
AMCG00008053 NA coding downstream 180689 40868653 ~ 40875437 (-)
AMCG00008056 NA coding downstream 207377 40847002 ~ 40848749 (-)
AMCG00008054 LOC105022343,LOC103467740,LOC106572463,LOC103385599,LOC106567217 coding downstream 227610 40819849 ~ 40828516 (-)
AMCG00008055 NA coding downstream 286802 40755783 ~ 40769324 (-)
AMCG00008066 NA coding upstream 8809 41086948 ~ 41095005 (-)
AMCG00008068 lama5,LOC107666435 coding upstream 50777 41128916 ~ 41189631 (-)
AMCG00008067 NA coding upstream 124769 41202908 ~ 41219672 (-)
AMCG00008072 LOC106566342 coding upstream 142177 41220316 ~ 41229073 (-)
AMCG00008071 NA coding upstream 162017 41240156 ~ 41248162 (-)
G28206 NA non-coding downstream 12079 41043696 ~ 41044047 (-)
G28203 NA non-coding downstream 36704 41018244 ~ 41019422 (-)
G28190 NA non-coding downstream 71222 40983619 ~ 40984904 (-)
G28139 NA non-coding downstream 305683 40748306 ~ 40750443 (-)
G28119 NA non-coding downstream 388264 40663917 ~ 40667862 (-)
G28241 NA non-coding upstream 50999 41129138 ~ 41129628 (-)
G28308 NA non-coding upstream 282005 41360144 ~ 41360468 (-)
G28309 NA non-coding upstream 286623 41364762 ~ 41366616 (-)
G28325 NA non-coding upstream 549222 41627361 ~ 41627752 (-)
G28361 NA non-coding upstream 729639 41807778 ~ 41812074 (-)
G28202 NA other downstream 38878 41016159 ~ 41017248 (-)
AMCG00008042 NA other downstream 767552 40268272 ~ 40288574 (-)
G27861 LOC797048,LOC108410937,LOC107740256,LOC105897858 other downstream 1551534 39500321 ~ 39504592 (-)
AMCG00007993 dynlrb1,LOC106565026 other downstream 1964231 39088557 ~ 39091895 (-)
G27720 NA other downstream 2000447 39054153 ~ 39055679 (-)
AMCG00008069 rps21 other upstream 121350 41199489 ~ 41201825 (-)
AMCG00008076 NA other upstream 327652 41405791 ~ 41412224 (-)
AMCG00008085 NA other upstream 768794 41846933 ~ 41849954 (-)
AMCG00008095 NA other upstream 1005335 42083474 ~ 42089493 (-)
AMCG00008104 samd10 other upstream 1281761 42359900 ~ 42401074 (-)

Expression


Co-expression Network