AMCG00008083


Basic Information

Item Value
gene id AMCG00008083
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 41821668 ~ 41821994 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008083
ATGCCTTGCTTGGGCAGACTGTGGGACTGGGTCTGGCCCGACTTCAGCTCCCCGGCCACCGTGCGCCCCGCCGACATCAGCACGGTCTCCGGGGACGTGAAGATCCCGACCCCCAGGAAGAAGCCGAGCCGGCTGTACGCCGCGCTGTACGACTTCGAGGCGCGGAGCGAGGAGGAGCTGTCGGTGAAGGAGGGGGACACACTGTCGGTGCTTGAGAAGCGCGGCGAGTACGTCCTGGCCAAGAAACTGCACGGGTCCCTGGAGTCGGGGCTGGTGCCGGCTAACTACGTGATGGTGTTACAGGATGAATTTGCAAATCACCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008083 True 327 mRNA 0.64 1 41821668 41821994

Neighbor

gene id symbol gene type direction distance location
AMCG00008080 pcmtd2,LOC102294427,LOC108440950,LOC103371493 coding upstream 8926 41800249 ~ 41812742 (+)
AMCG00008081 LOC108440949,LOC107690850 coding upstream 31990 41769950 ~ 41789678 (+)
AMCG00008077 oprl1,LOC106572940,LOC107681404 coding upstream 258479 41558420 ~ 41563189 (+)
AMCG00008070 NA coding upstream 464835 41350428 ~ 41356833 (+)
AMCG00008065 adrm1,LOC103354471,LOC107727009,LOC105894265 coding upstream 692794 41123903 ~ 41128874 (+)
AMCG00008084 NA coding downstream 4746 41826740 ~ 41832892 (+)
AMCG00008082 NA coding downstream 11268 41833262 ~ 41846010 (+)
AMCG00008090 zbtb24,LOC106676336 coding downstream 70895 41892889 ~ 41893875 (+)
AMCG00008088 NA coding downstream 86549 41908543 ~ 41915531 (+)
AMCG00008087 zbtb46 coding downstream 94712 41916706 ~ 41921311 (+)
G28329 NA non-coding upstream 93235 41728212 ~ 41728433 (+)
G28327 NA non-coding upstream 125960 41695354 ~ 41695708 (+)
G28303 NA non-coding upstream 432884 41388583 ~ 41388784 (+)
G28301 NA non-coding upstream 443375 41378051 ~ 41378293 (+)
G28300 NA non-coding upstream 449847 41370866 ~ 41371821 (+)
G28332 NA non-coding downstream 24998 41846992 ~ 41936214 (+)
G28394 NA non-coding downstream 155265 41977259 ~ 41980084 (+)
G28416 NA non-coding downstream 284873 42106867 ~ 42110075 (+)
G28421 NA non-coding downstream 295927 42117921 ~ 42186382 (+)
G28511 NA non-coding downstream 678680 42500674 ~ 42500981 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1099923 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 1574430 40241312 ~ 40247238 (+)
G27974 NA other upstream 1762282 40056632 ~ 40059386 (+)
AMCG00008020 NA other upstream 1986716 39817027 ~ 39834952 (+)
AMCG00008010 NA other upstream 2276061 39540220 ~ 39545607 (+)
G28395 NA other downstream 170865 41992859 ~ 41993377 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 591638 42413632 ~ 42437228 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 1283719 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 1322811 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 1470602 43292596 ~ 43305530 (+)

Expression


Co-expression Network