AMCG00008094


Basic Information

Item Value
gene id AMCG00008094
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42071749 ~ 42072173 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008094
CTGTCCTCAATTTCACGTATAAATGTGTGAGCGGCACATCGAAGACGaccctttgtttccttttgtctCCCTCTGCAGCTTGTGGGGTTCGTCTATGCCTGCTATGTCGTCAGTGCTTTCACCGAGGAGGAGGACAGCTACCAGCTGGGTCACTACCTCTCACGAACAGCCGGGGAGCCCCCCGTTTCCAACCCCGCCGCCCGCCGAGGCTTCTGGGATTGGATCGCTCTCACACACCTCTCTGCACATGCCACGCATTCCTCTTCTCAGCTGTCTTATGATGGTTTACTGGGGTATTTAAAAGGGAGCATCTcccaaatgaatgaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008094 True 330 mRNA 0.54 2 42071749 42072173

Neighbor

gene id symbol gene type direction distance location
AMCG00008093 LOC107724178,LOC107601334,LOC107696930,LOC108410586,LOC107594068 coding upstream 16356 42044804 ~ 42055393 (+)
AMCG00008087 zbtb46 coding upstream 150438 41916706 ~ 41921311 (+)
AMCG00008088 NA coding upstream 156218 41908543 ~ 41915531 (+)
AMCG00008090 zbtb24,LOC106676336 coding upstream 177874 41892889 ~ 41893875 (+)
AMCG00008082 NA coding upstream 225739 41833262 ~ 41846010 (+)
AMCG00008092 ythdf1,LOC108437571,LOC107668064,LOC107549989,LOC107549491,LOC107678560 coding downstream 19384 42091557 ~ 42100380 (+)
AMCG00008097 bhlhe23,LOC102799046,LOC107737661,LOC107560898 coding downstream 140199 42212372 ~ 42213085 (+)
AMCG00008098 dnajc5aa,LOC107668106,LOC108412505,LOC103036084,LOC107090698 coding downstream 207596 42279769 ~ 42289436 (+)
AMCG00008099 NA coding downstream 218543 42290716 ~ 42300339 (+)
AMCG00008106 NA coding downstream 366170 42438343 ~ 42442423 (+)
G28394 NA non-coding upstream 91665 41977259 ~ 41980084 (+)
G28332 NA non-coding upstream 135535 41846992 ~ 41936214 (+)
G28329 NA non-coding upstream 343316 41728212 ~ 41728433 (+)
G28327 NA non-coding upstream 376041 41695354 ~ 41695708 (+)
G28303 NA non-coding upstream 682965 41388583 ~ 41388784 (+)
G28416 NA non-coding downstream 34694 42106867 ~ 42110075 (+)
G28421 NA non-coding downstream 45748 42117921 ~ 42186382 (+)
G28511 NA non-coding downstream 428501 42500674 ~ 42500981 (+)
G28527 NA non-coding downstream 512059 42584232 ~ 42586668 (+)
G28548 NA non-coding downstream 549777 42621950 ~ 42622157 (+)
G28395 NA other upstream 78372 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1350004 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 1824511 40241312 ~ 40247238 (+)
G27974 NA other upstream 2012363 40056632 ~ 40059386 (+)
AMCG00008020 NA other upstream 2236797 39817027 ~ 39834952 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other downstream 341459 42413632 ~ 42437228 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 1033540 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 1072632 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 1220423 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 2950975 45023148 ~ 45036416 (+)

Expression


Co-expression Network