AMCG00008101



Basic Information


Item Value
gene id AMCG00008101
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42295442 ~ 42299333 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00008101
ATGAGCAAGTTTCTTCTCCTGGTCTCATCTTTGCTGGTCTTAATCTTGCCATCGTCGAGTGAATGCCATCCTGCAGACATCCCCAAACAGCAGAGCAGGAGGCTCAGCAGCACAGACTATGAGCTGTGGgcaaaacagcagcagcccGCATCGCAGACGGACAGCGTGGAGCTGATCCCTGAGCCGGACAATGATTCTGCACTGGAAGAGGACGCCCTCCTGGCCAAGAAAGGGTTAAGTCAGGTGTGCTCCGCCACCGGGCAGAAGACAAGCTTGGAAGATGTCCGCAACGAGAAGGAAGAGATGCGATCGAAGAGGCTTGAGGCCAAAGGCAAACCCAACTCCCTGGATCTCACATTTCATTTGCTCAGAGAGTTTCTAGAAATGGCCAAAGCTGAGAAAATGGCCCAAAAAgccatgaataataaaaaactaatgCAAGCCATAGGGAATGCAAGCGCCACACTGAATGTGACTCCAGACACGCTGCAGGACGGCCACCATGCCCAACATGGTGAGGAAGAGGACAACGGCCTAGTGAGGGACAACAAGCAGTGTGAAATGAAGGTGATGAGAAAATGGGACAGGACTAAAATCCACAGCTCCACAAGCAGAGAAGGAACATCACTAGACATCTTAGACATTGCAGTAGTGGTATTTATGTGCCAGTGCCAGGCTGAGCTGACTGGCAGGCCTTTCACTGACCCCAGCCCTCTCCACAGCCAGGGGCACACAGTCCTGGCAAATCTCCGGCCCTCCTCTCAGCACAGGACCGGCTACGTCATCTGTGGCCACCGGGATGAAATCAGTGGTCATCCACAGCTGCCTGGGGTCCCCCTTTGGCTGAGGAGGCTCACTGGACAGGCCCATGGTGGGACTAACTACCTGCCAAGCATTGGACTTATACCAGCTTGGATAGAGCCTGGTCTCATCACTGGCCTCTGCCAAAAGTCCTTGTATCTCCAAGTCATTTGCATCATGCTCCTCAAGAGATGGCTCCGGGTCGTCCTTCCCTCAACCTGCCCCTTGGCCTCCTCTGTCTCCCCAAAGACGCTCTTCACCAGGGCTTCTTCACTCTCCTCCACCGCCCCCTGCTCAGGCTCCTCGTCCCCggcctcctccacctcctcttccACTAGAAACAAGATTCCCATTAAAGAGACCCATATGCTCCACGACTGTGATCTCTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00008101 True 1191 mRNA 0.54 5 42295442 42299333

Neighbor


gene id symbol gene type direction distance location
AMCG00008096 slc17a9b,slc17a9,LOC107563661,LOC107560897,LOC106566596 coding downstream 27651 42249646 ~ 42267791 (-)
AMCG00008091 NA coding downstream 297758 41977687 ~ 41997684 (-)
AMCG00008089 NA coding downstream 351854 41925845 ~ 41943588 (-)
AMCG00008086 NA coding downstream 424731 41851208 ~ 41870711 (-)
AMCG00008079 NA coding downstream 536570 41593802 ~ 41758872 (-)
AMCG00008100 uckl1b,uckl1,LOC108411658,LOC107723126 coding upstream 11299 42310632 ~ 42330478 (-)
AMCG00008103 NA coding upstream 31806 42331139 ~ 42354632 (-)
AMCG00008108 b4galt5 coding upstream 230748 42530081 ~ 42537841 (-)
AMCG00008112 NA coding upstream 398804 42698137 ~ 42704412 (-)
AMCG00008114 NA coding upstream 465660 42764993 ~ 42808108 (-)
G28446 NA non-coding downstream 5197 42283959 ~ 42290245 (-)
G28410 NA non-coding downstream 203244 42091457 ~ 42092198 (-)
G28378 NA non-coding downstream 449455 41844956 ~ 41845987 (-)
G28377 NA non-coding downstream 452290 41842802 ~ 41843152 (-)
G28366 NA non-coding downstream 468676 41826442 ~ 41826766 (-)
G28456 NA non-coding upstream 1944 42301277 ~ 42302097 (-)
G28509 NA non-coding upstream 176387 42475720 ~ 42476990 (-)
G28512 NA non-coding upstream 201344 42500677 ~ 42500996 (-)
G28532 NA non-coding upstream 223472 42522805 ~ 42594860 (-)
G28900 NA non-coding upstream 1564274 43863607 ~ 43893808 (-)
AMCG00008095 NA other downstream 205949 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 445488 41846933 ~ 41849954 (-)
AMCG00008076 NA other downstream 883218 41405791 ~ 41412224 (-)
AMCG00008069 rps21 other downstream 1093617 41199489 ~ 41201825 (-)
G28202 NA other downstream 1278194 41016159 ~ 41017248 (-)
AMCG00008104 samd10 other upstream 60567 42359900 ~ 42401074 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other upstream 461671 42761004 ~ 42764654 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other upstream 797778 43097111 ~ 43120164 (-)
AMCG00008144 phf20,LOC107727854 other upstream 1211427 43510760 ~ 43583413 (-)
G28970 NA other upstream 2118541 44417874 ~ 44418196 (-)

Expression



Co-expression Network