AMCG00008106


Basic Information

Item Value
gene id AMCG00008106
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42438343 ~ 42442423 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008106
CAGAAGCCACCACCGGCTCCCAGCGTAATGACGATCTGGCGAGTCTGCGCTCTGTGCGCACTGAGGCATGAGGTCCGGCGCATCGGCGCTCACACTGCAGACTCCACCGCTCCAGCCGAGCCGTTTATATCCTCAcccaacagcaacagcagggcTACTGGTCTCCTCACCCCAGGATACGGGACGTGTATGTCTGGGACGGGCTCGGGCTGTAGTTTGACCATGAGCAACATCTGCGGCAGTGGCTGGCTGACACCTGGGATTCGCACATCTGAGGACCATCCAGACGATGATAAATGGCCTGTGATCTGTGTCTTAGTGGTAACAGTACTGTTTCTGGACGTCTCAAACAGCCGACAGAAGTGTAACTATACTGAGATCCTCAACACTTACAAAGAGTTGATCGTGACAGAACTTCAGAGCCTGaATCTCACAGGCCTGTATGATTCATCAAAAGAAAGGAGGAATCAAAGGGACCAGTGCCCTTCTGTAAAGgtacaGAAGATCTTGAGGTCCATTTACAAAATGACACAACAATTTAAATGCCAAGTCAAAGAAAAGGATTCACGTGctgACAAGCACAGAAAAGGGTTCtgaatgcatacataaaaaacactttgggaggaaaagaagaaacaaatggCAAAAAGAAACCATCAATGCCTTAATACAATGTTGGCAAAAACTGCAAATTGTGTACTctccaaaagaagaaaaacataagcCAAGAAGAATGCCTATCTGAAGAACATTTTCTTTACTGTTTTATGAATATCCAAAAAGGATATAagtaattaatgaaaaacactagtggctatttgctttattttttatagcttGACACCATAAGAACTACATgcatatattttctattatctgatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008106 True 883 mRNA 0.44 5 42438343 42442423

Neighbor

gene id symbol gene type direction distance location
AMCG00008099 NA coding upstream 138004 42290716 ~ 42300339 (+)
AMCG00008098 dnajc5aa,LOC107668106,LOC108412505,LOC103036084,LOC107090698 coding upstream 148907 42279769 ~ 42289436 (+)
AMCG00008097 bhlhe23,LOC102799046,LOC107737661,LOC107560898 coding upstream 225258 42212372 ~ 42213085 (+)
AMCG00008092 ythdf1,LOC108437571,LOC107668064,LOC107549989,LOC107549491,LOC107678560 coding upstream 337963 42091557 ~ 42100380 (+)
AMCG00008094 NA coding upstream 366170 42071749 ~ 42072173 (+)
AMCG00008105 NA coding downstream 2213 42444636 ~ 42448120 (+)
AMCG00008107 NA coding downstream 67464 42509887 ~ 42520350 (+)
AMCG00008110 slc9a8 coding downstream 109974 42552397 ~ 42579983 (+)
AMCG00008109 NA coding downstream 213768 42656191 ~ 42657239 (+)
AMCG00008113 NA coding downstream 249603 42692026 ~ 42692859 (+)
G28421 NA non-coding upstream 251961 42117921 ~ 42186382 (+)
G28416 NA non-coding upstream 328268 42106867 ~ 42110075 (+)
G28394 NA non-coding upstream 458259 41977259 ~ 41980084 (+)
G28332 NA non-coding upstream 502129 41846992 ~ 41936214 (+)
G28329 NA non-coding upstream 709910 41728212 ~ 41728433 (+)
G28511 NA non-coding downstream 58251 42500674 ~ 42500981 (+)
G28527 NA non-coding downstream 141809 42584232 ~ 42586668 (+)
G28548 NA non-coding downstream 179527 42621950 ~ 42622157 (+)
G28637 NA non-coding downstream 666627 43109050 ~ 43120781 (+)
G28678 NA non-coding downstream 735379 43177802 ~ 43201203 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 1115 42413632 ~ 42437228 (+)
G28395 NA other upstream 444966 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1716598 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 2191105 40241312 ~ 40247238 (+)
G27974 NA other upstream 2378957 40056632 ~ 40059386 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 663290 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 702382 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 850173 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 2580725 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 2704974 45147397 ~ 45171828 (+)

Expression


Co-expression Network