AMCG00008110 (slc9a8)


Basic Information

Item Value
gene id AMCG00008110
gene name slc9a8
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42552397 ~ 42579983 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008110
CTGCCAACTAACCAGGAAGTGGAGTGGTTATTATTGTGGTGTGCATATGTGCATGTAAAATGGACTCGCACCATACTTTACACATTAAAGCCtctctttaaatacaaattaaatacgTTGTAAGAATGCGTGTAATAACATATGTAAGCTGTAAAGCAGTGTGGTGCATTTTGTCACTCTTGCTGATCACCTGTGGGCTGTCGGTGGGAATCCAAGATGTGTCTTCGCATTCCAGGGCTGTCCGGGATGAAGGGGGGGATGATGGTAACAACCTCCCAGGCATCAGCAGTGTACAGGACAGTGGAAATGCCCAAAACAAGGACCAAGGTGCAAATCAAGTGGAGCAGCAAGGTGCACAGTTGGAAGAGTTAGTCAGGCAGAATGACACTGAAAACGCTGGCAATGAATCTCTCCATATTACCACCCCTGTTGCCAAGAGGATTACAGCggtgccccccacccctccgaAGCCTATCCTGCCAGTGCAGACGGGCGTTCAGGCCCAGGAAGAGGAGCAGTCCAGTGGGATGACCATATTTTTCAGCCTGCTGGTCATTGGTATTTGCATCATATTGGTGCACCTgcttattaaatataaactgcattttttgcCAGAAAGTGTTGCAGTTGTTTCTTTGGGTATCTTAATGGGTGCTTTCATAAAGATTATAGAGTTTCAGGAGCTGGCAAATTGGAAGGAGGAAGAGATGTTTCGCCCGAACATGTTCTTTCTTCTCTTGTTGCCGCCCATTATATTTGAATCGGGATATTCCCTCCATAAGGGAAACTTCTTTCAGAATATTGGCTCCATCACCCTCTTTGCTGTCATTGGGACAGCCATCTCCGCTTTCATAGTGGGAGGAGGAATATACTTCCTCGGACAGGCGGATGTGATTTACAAGATGACAATGACAGACAGctTTGCATTTGGCTCTCTCATCTCTGCTGTGGACCCAGTAGCAACCATTGCCATTTTCAATGCGCTGAACGTGGACCCAGTGCTGAACATGCTGGTGTTTGGTGAGAGTATCCTGAATGATGCCGTTTCCATCGTGCTGACCAACACGGCTGAGGGTTTCGCACGAGCAGAAAACTCCGGAGTGACTGGTTGGCAGACATTCCTGCAGGCTGTGGGATACTTCCTCAAGATGTTCTTCGGCTCGGCAGCACTTGGCACCCTCACTGGCCTCATATCTGCTCTCTCTTTGAAGCACTTTGACCTCAGGAAGACACCTTCTCTGGAATTTGGGATGATGATAATCTTTGCTTATCTCCCTTATGGCCTCGCTGAGGGAATCAAACTCTCGGGGATCATGGCGATTCTGTTCTCTGGCATAGTGATGTCGCACTACACGCATCACAATCTGTCTCCCGTCACACAGATCCTCATGCAGCAGACCTTGCGCACCGTGGCTTTCATGTGTGAGACCtgtgtttttgctttcctgGGGCTCTCCATATTCAGTTTCCCTCACAAATTTGAAATCTCCTTTGTGATCTGGTGCATAGTTCTGGTGTTGGTGGGCCGTGCGGTCAAcatcttccctctctccttcctgcTCAACTTCTTCAGGGATCATAAGATCACTCCCAAGATGATGTGTATCATGTGGTTCAGTGGCCTCCGGGGTGCCATCCCCTATGCCCTCAGTCTGCATCTGGGTCTGGAGCCCATCGAGAAGCGCCAGCTCATTGGCACCACCACCATCGTCATTGTGCTGTTCACCATCCTGCTGCTGGGGGGCGGCACCATGCCCCTCATCCGCCTGATCGACATCGAAGACAGCCAGAGCCGGCGCAAGAGCAAGAAGGACATCAACCTGAGCAAAACTGAGAAAATGGGTAACACGATTGAGTCAGAACACCTGTCAGAGCTGACGGAGGAGGAGTACGAGGCACAGCTCACCCAGAGGCAGGACCTCAAGGGCTTCATGTGGCTGGATGCCAAGTACTTGAACCCCTTCTTTACCCGCAGACTCACACAGGAGGACTTACTGCACGGCCGCATCCAGATGAAGACGCTGACAAACAAGTGGTACGAGGAGGTGAGGCAGGGGCCGTCGGGCTCCGAGGATGACGACGACGAAACGGAGCTCCTATGAGCCACACAAGGCCCTGCCTGAGGCGTTTCTACTGTACGGCACTACTGCGAAGTCCACACGGTACACTGTGTCACTCGGGAGGAGCACTAGGGGGGTCCGAAAGGGGTCCAAACACCACACTGCAAACTAATGCCAATTGAGCCAGTAATTTAACTCTGTCTGCAAATACCCAAGTGTACAGATTGTAcacgaaaaagaaaaagacaacaatgAAGGGAATTCACTTTTTCACGGAATCCGTAAAAGCAATATTTCTGCACTTTCTAGGAATGGAATcctccttttattttcttatttatatagttCAGTGGCTACTAAGCACCTGGGATGAGACGCCCTCCTCTGAAGCCTCTGTTTGCAGGCTCTGTAGACCTTTCTTTATAATCACTGTTCACAGGTTTCATTGAGACCCACACTAAATGGGATCAGGCCAACGAAAGAGTGCTTGCATTCTCCTCTGTGCTGCTTCCCCATTTCACCTTCTCTTCGACTTCACATATTGGGTGGTTTGTCTGCAGTTGCGTTTTTTCTGGTGACTTGAAGTCTGAATGTTTATTGAGTTGTACAGCTAATGAGGTTTAACACATCGATTTTGTAATTAGCATTTTGGGGTTGTTTCTTTTATTCGGTGCTGATATGTCACTCTGTAGCATCTAATTTAGAAGCTATAGCCAACATTTGAATGCTGTCTCCACTAGAGGGATCCATTATCACACTTATTTCCACCTCTCATCTCAAGCACCACCCCAACCCCCTCTCCTCTTTCACTGCAGAGAAAATGACGAACCTGATTGGCTCAGTGTAAATGTGAAGGGCCTCTAAATGACTGATGGCTAAGCTGTGAAATTGCACGTTAAAGTCGGGTGAAGGAGAATTTGTGTATTGCACTGCTGTGGGATTCTCATTTAACAAATACTGGCCCAATCTACATTTGATTCATGGCCTCCCATTATCATTTGTTCAGGAAACCTGGATGTTTTTAGGACCTTGTGAGAcggacagacacaaacaaagcatttaCAGGCGCCACCTAAATTTTGAGGTGACTATCTACTGTATACATTCATTAATCTGAGCCCTCTCAGGATTCTGTAAGCAATCCgtgttacagtacagtggaGATGCAGAAAGCTAGGTTTAAACATCTTTAATTCTGTGTTTGCCATCAGACTGATCACATGAGGTTTGTATGAAGACAGTTTTGTAGCCCAAGCTGATCTACAGAGGGCACTGTGGACTAGGTTCACATACAGCCCCCTGTCTAATGTTGCAATAAGCAGCCCAAAAGCTTTTCCACACTCCAGGGCTTACTGTGAGTCTGAAAGCTCTTCCTTTACACTAGTCCTGCCTGAGCTCAGTGTTAGAGGACTGAGATATCAACACTTCAAATGAAGAACAGCTATCTGAATTTCAAAGGATTGATCAGATAAGCTTAAAATGCACGATAGCCTAATGATCTGATTACTGTAGACGTTTGAAAAGCTGCGATTTTAATCTGTCTTCAACAAAGTGTCTTATCAAAACATTACATGTTTCTCCAAAAATCTTTTCTTTGACAAAACCAGAGCTTTTCCCAGCTTCATTTCACAAGTGGTACTGTGGAAGAATTTAAGTGTTAAGTCTTGTCTTGTTAAGTCAATTTACTAATTTACCCTAGCACAGTTCCCAGAccacttcattttaaataactggaGTCACGTAACACCCTGGTTCATAAATGTGTTACAGTTTTCAAACCGATTACGGTCTCTCTAAGTCaaaagatgttttcttttctgagcTTGGGCCAGGGTTTTCATTGTAATCTGGAGGCCAACGGAAATACCTTCTTTTAAACTGATATATAACAGGTATAATATAGCACAGCAGCCTCTTTCTCACAATGTATGAAGACATTTCTGCTCTGTAAAATTAAGTTCAAGAAAGGGGGACAACTGAGTGAACATGAAGAAAGTAGGACTTGTTAAAGACTCAAGCTATTCATCTGTGATTGTTttactttctatttattttatgtctcCTTACAATGAATGTAAATGAAACAAGTAAATTGTACGGGTTGGGAGGTATTGGAATATTCTTTAGAATGAATGGGgaatgtgttatttatgttttttaattaaatttttttaGTACATCCATTATTTGACAtatgaaaagcacttttagtaaattaaatctCAAAACATTTCTGAAGTAGACTATATGTGAATAGCAGGGATTGAATATGGATTGATGCAACTGCATAGAAGTATAATTTACAGTGATTCTCATACATTTTAGTTTAGCCTTGTCTTTGttaaattattagtattagtatgaAGAAAATtgataatataatatgtaagGGAGcagaaatatacaattttatattttcactttgttCCATAATACATTGTATCAAATTGTCCTGCTTCATTCCAAACATCAACCCGATGGCCAGTAACATAATCCAGATGCATTGAGAGCTTCCTCTCCATTTGAAAGGCAtagtaattaatttgtatttatatttttcatttgctttgggtgaaattttgttttaatccagcACAATGTGGCAATGTTGTCCAACCACTTAACACTTACCTTCCCTCTGAagatttctttgtgtgtttatttcctgGTTTTAATTTGTCAGTGTTCTGTCTTCATTTCTTTCTAAACACAGTTAAAACActcctttcttctttctttaccGCTTTAAATTGTCTACATGTAACAATGGACTCAATTTTACATGATTGTATTCTAACTGATGAAAATGTGACAGACTGATGTTGCGTCCAGGGTGTTCCCTATCCAGCTCCCCCCTGATCCTGCACTGGATGGATGAATGGTTTAAATAATCTGCTTTTCATTATCATTTCTATTGTATACATATGTGCCAAAActttagatattttaaatgttttatttattaaatcctTCATAGAATGATACAAATAGTATACAAAGAtttggttttgatttaaaaaatgtaagaaaaccAAGAGAGCAAATCAAATGGTGTTTGTTTGGAATCCCCTTAAATAAATAGGATGCAGCAGGATAGACTGCAAACCCTGCAATTAAGCTACAGGGTTTCTACAACTCACTTCTGGATGCTATCGCAgcctgtcatttaaaaaataaatcgtaATGAGAATGTACTATTAAAAAGAGACTTCCAACTA

Function

symbol description
slc9a8 Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport and regulation of intracellular pH. Predicted to act upstream of or within regulation of pH; sodium ion transport; and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including blood; eye; heart; liver; and pleuroperitoneal region. Orthologous to human SLC9A8 (solute carrier family 9 member A8).

NR:

description
PREDICTED: sodium/hydrogen exchanger 8

GO:

id name namespace
GO:0006885 regulation of pH biological_process
GO:0055085 transmembrane transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015385 sodium molecular_function

KEGG:

id description
K14724 SLC9A8, NHE8; solute carrier family 9 (sodium/hydrogen exchanger), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008110 True 5278 mRNA 0.43 16 42552397 42579983

Neighbor

gene id symbol gene type direction distance location
AMCG00008107 NA coding upstream 32047 42509887 ~ 42520350 (+)
AMCG00008105 NA coding upstream 104277 42444636 ~ 42448120 (+)
AMCG00008106 NA coding upstream 109974 42438343 ~ 42442423 (+)
AMCG00008099 NA coding upstream 252058 42290716 ~ 42300339 (+)
AMCG00008098 dnajc5aa,LOC107668106,LOC108412505,LOC103036084,LOC107090698 coding upstream 262961 42279769 ~ 42289436 (+)
AMCG00008109 NA coding downstream 76208 42656191 ~ 42657239 (+)
AMCG00008113 NA coding downstream 112043 42692026 ~ 42692859 (+)
AMCG00008111 NA coding downstream 125001 42704984 ~ 42713579 (+)
AMCG00008115 mafba,LOC107680735,LOC107562627,LOC107703617,LOC105904296 coding downstream 181543 42761526 ~ 42762545 (+)
AMCG00008119 NA coding downstream 432525 43012508 ~ 43018451 (+)
G28511 NA non-coding upstream 51416 42500674 ~ 42500981 (+)
G28421 NA non-coding upstream 366015 42117921 ~ 42186382 (+)
G28416 NA non-coding upstream 442322 42106867 ~ 42110075 (+)
G28394 NA non-coding upstream 572313 41977259 ~ 41980084 (+)
G28332 NA non-coding upstream 616183 41846992 ~ 41936214 (+)
G28527 NA non-coding downstream 4249 42584232 ~ 42586668 (+)
G28548 NA non-coding downstream 41967 42621950 ~ 42622157 (+)
G28637 NA non-coding downstream 529067 43109050 ~ 43120781 (+)
G28678 NA non-coding downstream 597819 43177802 ~ 43201203 (+)
G28862 NA non-coding downstream 1314126 43894109 ~ 43895951 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 115169 42413632 ~ 42437228 (+)
G28395 NA other upstream 559020 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1830652 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 2305159 40241312 ~ 40247238 (+)
G27974 NA other upstream 2493011 40056632 ~ 40059386 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 525730 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 564822 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 712613 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 2443165 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 2567414 45147397 ~ 45171828 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022105 slc9a8 coding NC_007134.7 CM002907.2 3949548 ~ 4019928 (-)