AMCG00008113


Basic Information

Item Value
gene id AMCG00008113
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42692026 ~ 42692859 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008113
ATGGCACTGAGATCGGTCTTGTGCTTCCTGTTGCCTGGAGCGCTGGCTGTCATAGCATGGGGCTGGTACCTTTCACGCAAGAAAGAGGACGGTGATGCCTGCCACGCCACGGAGGGGGAAGCGGGACAGGAGCTGCCTGAACAACACAGCCTCACGGCCCCCTCCCGCAAAGGCACCCACGGCAGCACGGCGAATAGCAATGGCCTCGATGGTGCCCCCCTCAGGAATGGCAGTCCCGGCCCGAGTCAGAGCGGGCTCGATCCTTCTGAAGGCTCCGATGTGAAGGACTCCGTGGCCAGCGGCTATATGCTGCGAGAGATCGCCCGCTGCGCCGACAAAGCCACACAGACGGACAACCTGAATGAGGTTCCTGAGGCCGAGGGCTCTTTACGGGACCTGTCCCGAGCAGATATCGGACAAGCCAGGGGCGTGGACGTAGGAGTAGGCCAGTCTGAAGAGGACCTCACCACGGAACCTCCTCAGAAGCCCTCTGCAGAGAAACAGAGCAATTCAGAGGTGACCGAACTGCAGAAGAGGTGCGATACAGCCCTGCAGACAGTGCGCGCCCTGGAGCGTCAGCGGGACACATTGCAATATGAAGTGGATCATCTGCGGGACACCCTGATGGAGGCGGAAGAGATGCAGGCCGAGGCACACCGAGAAGGTGTTGACCTGAGAAGGGAGCTGCGCAGGGAGGAGGCAGAACGGAGACGCCTGGAGGCTGGTTTCTCTGATCTGCAGAGGCAGTTGAAGATGATGAGCAATGGGGCAGAAGGAGAGCAGGAAGTGAGCGATGATCAGTGTCCCATTCTGGGCTCTGCTGGGGAAGCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008113 True 834 mRNA 0.60 1 42692026 42692859

Neighbor

gene id symbol gene type direction distance location
AMCG00008109 NA coding upstream 34787 42656191 ~ 42657239 (+)
AMCG00008110 slc9a8 coding upstream 112043 42552397 ~ 42579983 (+)
AMCG00008107 NA coding upstream 171676 42509887 ~ 42520350 (+)
AMCG00008105 NA coding upstream 243906 42444636 ~ 42448120 (+)
AMCG00008106 NA coding upstream 249603 42438343 ~ 42442423 (+)
AMCG00008111 NA coding downstream 12125 42704984 ~ 42713579 (+)
AMCG00008115 mafba,LOC107680735,LOC107562627,LOC107703617,LOC105904296 coding downstream 68667 42761526 ~ 42762545 (+)
AMCG00008119 NA coding downstream 319649 43012508 ~ 43018451 (+)
AMCG00008116 NA coding downstream 359809 43052668 ~ 43055685 (+)
AMCG00008121 NA coding downstream 466710 43159569 ~ 43175126 (+)
G28548 NA non-coding upstream 69869 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 105358 42584232 ~ 42586668 (+)
G28511 NA non-coding upstream 191045 42500674 ~ 42500981 (+)
G28421 NA non-coding upstream 505644 42117921 ~ 42186382 (+)
G28416 NA non-coding upstream 581951 42106867 ~ 42110075 (+)
G28637 NA non-coding downstream 416191 43109050 ~ 43120781 (+)
G28678 NA non-coding downstream 484943 43177802 ~ 43201203 (+)
G28862 NA non-coding downstream 1201250 43894109 ~ 43895951 (+)
G28931 col9a3,LOC106571930 non-coding downstream 1361106 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 1998682 44691541 ~ 44749908 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 254798 42413632 ~ 42437228 (+)
G28395 NA other upstream 698649 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 1970281 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 2444788 40241312 ~ 40247238 (+)
G27974 NA other upstream 2632640 40056632 ~ 40059386 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 412854 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 451946 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 599737 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 2330289 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 2454538 45147397 ~ 45171828 (+)

Expression


Co-expression Network