AMCG00008114


Basic Information

Item Value
gene id AMCG00008114
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 42764993 ~ 42808108 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008114
ATGAGACACCAACTCGTCCTGCCAACTCTCTCCATCGACCAGAACATTCTGGAAGTCTGTGACACAGTCAAAGTCCTGGGGGTCACCATCCAGGATAACTTGTGGCGGGACAGTCAGTTGGATCATATGCTGACCTCAGCCAACAGGAACCTTTTTGCTCTGCATCGACTGAAGAAATTTGGTGTCCGAGACCCAGAATTGGTCTCCATCTGCACAGGCTACGTGCGCTCCATGCTGGATTATGCTGTCCCCATCTGGCACAGTTCCCTGACTACAGACCACACTAAAAAGCTGGAATGCATAAAGAAATGGGCCTGTAAAGGAGGAGCTTACAGGTCATCAGACATGGACCTCAAACAAACTGGCCATCCAGAGATGTCGGACGGAGAGATACAGGAGATCTCCAATCCCCTATATGACTGGGTCTCTCAGGGGAGGAACCAGCCCAGGACCCCGGCACCACCGCTAGGGAAGACAGCGAAAGATAGACATGCAGGGATAGACCAGGGGCGTCACACAGGCTGTACTTCCTCAGCCAGGTTCAGCTGCTTGCCCCCACATGTCAGCTGCACAAAAGGGACAGTTGACAGCGAGGGCAAAGgAAAGGGTATTCTAGAGTCCAgtgatgtgttttctttcctgatGCAAAGTGAGAGCTGGAAGATTTTCCTCCTCAGTGAGTTTAAACAGGAAGAGGAGCTGAGGAGTTGGTCTTGTGGAAACATCTGGGCGTCTTTATCAGGGGGAGTTGGGCCTGCTGAGGCCCTCAGGCAGGATTTAAACCCCAGACCTGAAGTAGGAGCAAGGCTGTTTGCAGTTGAGCAGGTTCCAGGCCCCGAGGTACAGCGCAGCTCAGCCACAGCTCTGGATCACCTTCAAAGCAGCGCTGAGCTCCCCGAAGGAGGCAGGGCCCTCTCGCCGCTCTCTGGGGAGAAGCATGGttactacaactactactactactactactactactactactactactattactactacgaCGACAACTATTGCTACTTACTATTTGAATATTTGCTATTTCTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008114 True 1047 mRNA 0.51 7 42764993 42808108

Neighbor

gene id symbol gene type direction distance location
AMCG00008112 NA coding downstream 60581 42698137 ~ 42704412 (-)
AMCG00008108 b4galt5 coding downstream 227152 42530081 ~ 42537841 (-)
AMCG00008103 NA coding downstream 410361 42331139 ~ 42354632 (-)
AMCG00008100 uckl1b,uckl1,LOC108411658,LOC107723126 coding downstream 434515 42310632 ~ 42330478 (-)
AMCG00008101 NA coding downstream 465660 42295442 ~ 42299333 (-)
AMCG00008118 dhx35,LOC102790768 coding upstream 207248 43015356 ~ 43028990 (-)
AMCG00008117 NA coding upstream 221748 43029856 ~ 43036431 (-)
AMCG00008122 clg20h20orf24,LOC105904298,LOC105926099,LOC104925093,LOC102790476 coding upstream 231290 43039398 ~ 43043630 (-)
AMCG00008125 plcg1 coding upstream 254726 43062834 ~ 43083682 (-)
AMCG00008123 NA coding upstream 317646 43125754 ~ 43131680 (-)
G28532 NA non-coding downstream 170133 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 263997 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 288003 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 462896 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 474748 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 1055499 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 1086071 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 1188010 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1679102 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1858235 44666343 ~ 44666577 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 339 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 363919 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 675500 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 915039 41846933 ~ 41849954 (-)
AMCG00008076 NA other downstream 1352769 41405791 ~ 41412224 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other upstream 289003 43097111 ~ 43120164 (-)
AMCG00008144 phf20,LOC107727854 other upstream 702652 43510760 ~ 43583413 (-)
G28970 NA other upstream 1609766 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 2341393 45149501 ~ 45228504 (-)
G29301 NA other upstream 3242587 46050695 ~ 46054346 (-)

Expression


Co-expression Network