AMCG00008119


Basic Information

Item Value
gene id AMCG00008119
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43012508 ~ 43018451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008119
ATGACCCACGTAACCACCGAAGACATGTCAAAAGAAGTCACTCCCAGAAATACACTGGAGGACATACAACTTGTGAAAattaaagaagaacaagaagatgAGGTGGATGTGGAAAACAGTTCAGAGAAAACTCTTTATCTTTGCACAGACTGTGGTAAGAGCTTCAGCACAATAGGTCAGCTGGAGTCTCATCAAGTGCTGCACAGCGATGAGAAGATCCCCTCAGAGACTTCTGATCGGCTGAATTCTGTCCTGGACTGGCGAATTCGACACGCCTTGTAA

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008119 True 282 mRNA 0.45 2 43012508 43018451

Neighbor

gene id symbol gene type direction distance location
AMCG00008115 mafba,LOC107680735,LOC107562627,LOC107703617,LOC105904296 coding upstream 249963 42761526 ~ 42762545 (+)
AMCG00008111 NA coding upstream 298929 42704984 ~ 42713579 (+)
AMCG00008113 NA coding upstream 319649 42692026 ~ 42692859 (+)
AMCG00008109 NA coding upstream 355269 42656191 ~ 42657239 (+)
AMCG00008110 slc9a8 coding upstream 432525 42552397 ~ 42579983 (+)
AMCG00008116 NA coding downstream 34217 43052668 ~ 43055685 (+)
AMCG00008121 NA coding downstream 141118 43159569 ~ 43175126 (+)
AMCG00008127 NA coding downstream 200648 43219099 ~ 43223126 (+)
AMCG00008130 NA coding downstream 213859 43232310 ~ 43251526 (+)
AMCG00008128 NA coding downstream 234146 43252597 ~ 43259195 (+)
G28548 NA non-coding upstream 390351 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 425840 42584232 ~ 42586668 (+)
G28511 NA non-coding upstream 511527 42500674 ~ 42500981 (+)
G28421 NA non-coding upstream 826126 42117921 ~ 42186382 (+)
G28416 NA non-coding upstream 902433 42106867 ~ 42110075 (+)
G28637 NA non-coding downstream 90599 43109050 ~ 43120781 (+)
G28678 NA non-coding downstream 159351 43177802 ~ 43201203 (+)
G28862 NA non-coding downstream 875658 43894109 ~ 43895951 (+)
G28931 col9a3,LOC106571930 non-coding downstream 1035514 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 1673090 44691541 ~ 44749908 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 575280 42413632 ~ 42437228 (+)
G28395 NA other upstream 1019131 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 2290763 40663972 ~ 40721745 (+)
AMCG00008036 fkbp1ab,fkbp1a,fkb1a,LOC105013763,LOC108435222,LOC107707744,LOC100705189,LOC107657066,LOC101476936 other upstream 2765270 40241312 ~ 40247238 (+)
G27974 NA other upstream 2953122 40056632 ~ 40059386 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other downstream 87262 43105713 ~ 43108242 (+)
AMCG00008120 NA other downstream 126354 43144805 ~ 43156072 (+)
AMCG00008132 NA other downstream 274145 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 2004697 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 2128946 45147397 ~ 45171828 (+)

Expression


Co-expression Network