AMCG00008123


Basic Information

Item Value
gene id AMCG00008123
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43125754 ~ 43131680 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008123
TCTGCACTAAagtctgatttatatttttcacatattcATTTTATCAATGCTCATTGTTCCTGTGCAGTTaaattggggggtgggggtgacttacaattgatCATTTGCTATCATTCAAAGCACGGAGGATAAAAGGAAAAACTGGTAATCACAGAAACTGGAATATTCACatttagaaggaaaaaaaaaagtgtgtgtgtgtgggtgggaaaaaaaaaaaaaaaaaaacacaaccaaagcTGACTAAAATGGACGATTCTAGGTCCTACCATGCTAACTGTCAGATCTCTCTGAGTGAGGTGCTGGAGTTGCAGGGCCAGCCCGTCAGCGAGGAGCAGGCTTGGGCTCTCTGTCACCAGCTGTGCTGCCTGATGGTCCAGGACCAGCGCCTGCACGGCTGCGGGGACAGGGGGCCCTGGAAAGCGCCCAGGATCCGCGGCGCTGAGAGCATCCTGCTGAAAAACGATGGCACCGTGTGTCTAGCAGAGAACAGCATTGATGCATCTCTTGAGTTCCAGACTGAAGATGAAGTGGTGGATTTCATTGGGCGGCTCATCTACACCTGCCTGGACTGGGGTTTGGGCAGCAATGTGGAGAGGGACCTGAGTGAAACTTTGGAGATCTTTATCTGCCAAATGACTAAACTGGACTCCTGTCACAGGAGAAGAGGGGAGCCTTTTCAGCCAATCTGCACATTCTCCGAAGTCATTGAGGTGTGCGAGAACCGCCTGTACAACCCAGCCAAGGCTTCCCACCATTACAAAGCCATCTGTTCCATACTGTTTGCAGAGACCATTGACCTCTGCCAGTATTTACACAAAATCCAGCATACAAAGGAGACCCTGCAGAAACTGGTAAATAAACCAGAATGCAGCATTGTTGCTCCAGTTACAACAAACTGGGTTTTCTCCTGGAGACACGTGATCGATGAGTTAAGAAGAGGCGTGAACCTGAAGGCCAAGTCACCGGGCCGCAATGTTAGTGCTCCGTTGCCCACTGAGCTCTCCCCCTACGAGCAGCTCCTGAAAGACATTCAGTACAAGAGGTACAATCTCCGCAAAGTCAAGACGCTGGATAACCTGCCGAAGCAAACTGACCCCCACGGTGCTCTTCTGGATTTTGTTCGGTCCAACCCTGTATTGAGGCCTGCCTCGTCCAGAAAACTAAAGTCACGTCCCAAAGAGGAGGCCAGTCTTCATGAGCTGCTGATGGAAGAGATCCGATCTGCCGCCAAGCTGAGACCGCTGTCCTCTCGCAGAAGGAGGGCTGCTTTGCAAGATAACTCTCCTCCGAAATGTGTCATCTCCATGTCAATCTATGAGGACTCCTCCTTTTCTGAAGATTCATTTTGCCTGATTAATTCCATTCCCAAACCAGATCTTGGTGGATTTGGGTCTGAGGGTGCGAGCAGAAATATTGAGAGCAGCGATGGCAAATTGTTTGAGAACAATTGCAACAGAAGTGATCAAGATCTGAAGTTCTCCCCTTTGCTGTCATCGTCGCCGGTAGATTTGGAATCCTGCAAGTCTGAATACAAACGGAGGTCCAAGTCGTTTGATGGCAGCATTGAACTGGAGAGAAGGAGCTGCTCTGGGCCCTGCAAGCCTCTCACGATTGCTGATGTGATGAAGATGCGTCAGATGGAGATGGGAAGTTTGCAGAACCTATACTACACAAACTGGAGGGTATGTTCCTGTTGCTATAAGAGGAGCTTGTATTTTACCTGGCACAACTCTTGCTACTTCTGCAACAGGGTTGTGTGCCCGGAATGTTGCATGGagATACTGCTGCCCCACAAATGGTGCGTGAATCTTCCAGTGAGTTTCTTTAAGATCATTGTGACCAGGGAAGCGGAGCTGAACGGAAAGAACCAAGTGAAAAACTTCTGGCAGGAACGCTGGGACTGGGACAGTTCCAGaGTGCCTCTGGTCCTGGATTCAAGAGTAACCGAAACAGCCCCCCAGCACAGACTTGCAATGAAGGACTGGTACAGCAACGACATCTGTGTGGGGTGTAAGGGTTTCCTTATTAACGCCTGTGACTCTGTGATCAGTAGGCATGCAGCAACTGTACCAAGAGAGATTTGATGATTGTGAACCTGTCCTGTGGGATTCCCTTTTCACAAACCCCTTCTATAGCTAAAGCTTGTGGAAAAGCCCAATATGCCTTCAACACTGCTCCCACCTGaacacttttgttttccccccaccAAACTGGATTTGTTCTGTTGGTTTTTCCCTTTTATATGTATTGCACaaattttttaaatcactccACGCACGTGGCACTTTTATTAAACCAAGCACGTATTTTCGTATTCTATGAATTTTGCAAAgtcttgctctctctcacacaagcTTTAgggttttatctttttaatgttttatctttGGAATTCTAAATAAATATGCCATGAAATTTG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008123 True 2422 mRNA 0.47 16 43125754 43131680

Neighbor

gene id symbol gene type direction distance location
AMCG00008125 plcg1 coding downstream 42072 43062834 ~ 43083682 (-)
AMCG00008122 clg20h20orf24,LOC105904298,LOC105926099,LOC104925093,LOC102790476 coding downstream 82124 43039398 ~ 43043630 (-)
AMCG00008117 NA coding downstream 89323 43029856 ~ 43036431 (-)
AMCG00008118 dhx35,LOC102790768 coding downstream 96764 43015356 ~ 43028990 (-)
AMCG00008114 NA coding downstream 317646 42764993 ~ 42808108 (-)
AMCG00008126 NA coding upstream 2070 43133750 ~ 43143331 (-)
AMCG00008129 NA coding upstream 46056 43177736 ~ 43192496 (-)
AMCG00008131 NA coding upstream 73778 43205458 ~ 43210346 (-)
AMCG00008134 NA coding upstream 101553 43233233 ~ 43244258 (-)
AMCG00008133 NA coding upstream 137337 43269017 ~ 43270574 (-)
G28532 NA non-coding downstream 530894 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 624758 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 648764 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 823657 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 835509 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 731927 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 762499 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 864438 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1355530 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1534663 44666343 ~ 44666577 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 5590 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 361100 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 724680 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 1036261 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 1275800 41846933 ~ 41849954 (-)
AMCG00008144 phf20,LOC107727854 other upstream 379080 43510760 ~ 43583413 (-)
G28970 NA other upstream 1286194 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 2017821 45149501 ~ 45228504 (-)
G29301 NA other upstream 2919015 46050695 ~ 46054346 (-)
G29361 NA other upstream 3349266 46480946 ~ 46481898 (-)

Expression


Co-expression Network