AMCG00008130


Basic Information

Item Value
gene id AMCG00008130
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43232310 ~ 43251526 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008130
ATGAAGTTATTGGCTCAGAGCAGCCACTACCTTACACAGGTATCACAGATTGGAACAGAACTGAATTCCCATGTTAGAGCGTTAGGCAACAGGCTCACCCAGGTCGTGACACAGGCCTGCGATCTGCACACACAGCATGTCTCTCTGGGTGATGTTGAGCTCCGGCTGTCGCTCATGCAGCGCCTGGACCAGCCTTCCAGCCAGGACGGGGACTTTATTGCCCCGGAGCTGACTACTCTGAAAGTCAACTGGATTTGtaatgatgacgatgatgatgacaatGGAAAGGGAGGAAGATCCATGAATGGATTCTCCGTTCTCCTTCTTGACCTGGGTCTAGCTCTGGAGTTAACGGGTAACAATATCTACGGTGAAGACATCTGCCAGGTGCTGGAAAGTGTCAAAGAAAACTCAGAGAGGTGCGCCTACATTCTGATGGACAAAATCCGGCCTCAGCCAGTGAGGAACTACCTGTTGAGATCAGGAAGCCCACTGAAGCTCAGCACCTGCCTGAGTGAGCTGGGCATGTTCGGAGCCTACGTCAGGCAGGGGAAGGGCATGGTGCTGAATGAGTGTACAGGACATCTCCTGAGGACCAAGAGTGCTGAACACTCAGATGGGGGGTTGACAACCGGTGTGGCAGTGCTGGACAACCCTCTCCTCATCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008130 True 669 mRNA 0.52 7 43232310 43251526

Neighbor

gene id symbol gene type direction distance location
AMCG00008127 NA coding upstream 9184 43219099 ~ 43223126 (+)
AMCG00008121 NA coding upstream 57184 43159569 ~ 43175126 (+)
AMCG00008116 NA coding upstream 176625 43052668 ~ 43055685 (+)
AMCG00008119 NA coding upstream 213859 43012508 ~ 43018451 (+)
AMCG00008115 mafba,LOC107680735,LOC107562627,LOC107703617,LOC105904296 coding upstream 469765 42761526 ~ 42762545 (+)
AMCG00008128 NA coding downstream 1071 43252597 ~ 43259195 (+)
AMCG00008141 NA coding downstream 85415 43336941 ~ 43338038 (+)
AMCG00008143 NA coding downstream 140578 43392104 ~ 43410731 (+)
AMCG00008142 ndrg3,LOC107705728,LOC107696989,LOC107693556,LOC108429301,LOC103029397 coding downstream 220124 43471650 ~ 43494202 (+)
AMCG00008140 NA coding downstream 245762 43497288 ~ 43507053 (+)
G28678 NA non-coding upstream 31107 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 111529 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 610153 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 645642 42584232 ~ 42586668 (+)
G28511 NA non-coding upstream 731329 42500674 ~ 42500981 (+)
G28862 NA non-coding downstream 642583 43894109 ~ 43895951 (+)
G28931 col9a3,LOC106571930 non-coding downstream 802439 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 1440015 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 1517151 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 1544398 44795924 ~ 44798463 (+)
AMCG00008120 NA other upstream 76238 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 124068 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 795082 42413632 ~ 42437228 (+)
G28395 NA other upstream 1238933 41992859 ~ 41993377 (+)
AMCG00008051 kif3b,LOC106572821,LOC106566426 other upstream 2510565 40663972 ~ 40721745 (+)
AMCG00008132 NA other downstream 41070 43292596 ~ 43305530 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 1771622 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 1895871 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 2089048 45340574 ~ 45343914 (+)
G29183 NA other downstream 2188987 45440513 ~ 45441064 (+)

Expression


Co-expression Network