AMCG00008131


Basic Information

Item Value
gene id AMCG00008131
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43205458 ~ 43210346 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008131
ATGGTTCTGTTGATTATCGCCATCACACTGGGCAACGTTGTGAGTCTTGTCATCTTTCTGGGGTCCAAGCGGTTCTGGACGCCCCAGGGCTATTTAAAGGCATCTCTCGCTCTGGCGGACATAGCGGTGGGGGTTCTGGTAATCCCATACTCCGTCCATAGGGAGATCCAGGTAGTACTGCAAGGGGAAGACTACAACCAGGACCAGTCGGAAGAAGTGTGGCGTTTCCATCCTTGCCACGTTATAGGACCCATTTTCGCTGGGTGCACTTTTGTCTCCATCACCACCATCTTCCTGCTGTCCATTGAGAGGAGCATCACAGTGCTGAGACCCCTGCACAAGAACATTGTGGTCACCAAGAAACGGACCCTCGGACTCATTTTGTTTTCGTGGTTGCTCTGCTTTTTCCTCGCCCTGGTGCCACTGCTTTTCAGCCGGGACATCACCCTGGAGTACAACCCCTGCAGCCGAATGTGCAACTACGCCTTTTCACCGCCACACCAGAGCTCCGATTTGAATATACTGCTCCTATTCCCGGCCTTTGATTTCTCTCTGCTGGGTGGGACCTTGGTCATCAATCTGATCACTTTCAGTGCGATACGCCAGTTCTGCAACATCCGAAAGCGCCTGGCAGAGTCAGAGACCCAGCGCATCTCCAACAGCCCATCCTTTTCGGACATCCGGGCGGCGAAGACCATCGTCATTCTCACCCTTTCGTTTTCGGTCTCCTTTGGCCCCGTTGCGGTGTTTGTCTTGGGCAGTGTCCTCGGATACCAATGGTGCGACTTCTCTTTCTACGCTTTCTGGATTTTGACCTCCAACAGCTGCTGGAATGTGGTGATCTACAGCGTCCGCGACCGCAGCTTCCGCCGGAGGACCAGGGAGCTGTTCAGCGGGAAGGTGCTGAAAGACCGCCGCCCGTCTGTGTGGACAGAGCGCCGTCACACCACACACTGCGTGGCGGTGATCAAGGACATACTGCGACCACAACACACCAACTCGGCTGATTTGTTCTGTCACTCTTAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0003008 system process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008131 True 1026 mRNA 0.54 2 43205458 43210346

Neighbor

gene id symbol gene type direction distance location
AMCG00008129 NA coding downstream 12962 43177736 ~ 43192496 (-)
AMCG00008126 NA coding downstream 62127 43133750 ~ 43143331 (-)
AMCG00008123 NA coding downstream 73778 43125754 ~ 43131680 (-)
AMCG00008125 plcg1 coding downstream 121776 43062834 ~ 43083682 (-)
AMCG00008122 clg20h20orf24,LOC105904298,LOC105926099,LOC104925093,LOC102790476 coding downstream 161828 43039398 ~ 43043630 (-)
AMCG00008134 NA coding upstream 22887 43233233 ~ 43244258 (-)
AMCG00008133 NA coding upstream 58671 43269017 ~ 43270574 (-)
AMCG00008138 NA coding upstream 139753 43350099 ~ 43350744 (-)
AMCG00008137 NA coding upstream 157174 43367520 ~ 43381863 (-)
AMCG00008139 NA coding upstream 186244 43396590 ~ 43408933 (-)
G28532 NA non-coding downstream 610598 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 704462 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 728468 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 903361 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 915213 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 653261 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 683833 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 785772 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1276864 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1455997 44666343 ~ 44666577 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 85294 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 440804 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 804384 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 1115965 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 1355504 41846933 ~ 41849954 (-)
AMCG00008144 phf20,LOC107727854 other upstream 300414 43510760 ~ 43583413 (-)
G28970 NA other upstream 1207528 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 1939155 45149501 ~ 45228504 (-)
G29301 NA other upstream 2840349 46050695 ~ 46054346 (-)
G29361 NA other upstream 3270600 46480946 ~ 46481898 (-)

Expression


Co-expression Network