AMCG00008133


Basic Information

Item Value
gene id AMCG00008133
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43269017 ~ 43270574 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008133
ACCCGTTTTCTCATGATGGCGTCAGTCCCTGAGGATGTGTTGATGAATGAAGCACTGATAGAAGATCTGCAGAAGCTGGCTAAGGACACTGCCCTGCTTCAGGGCATCCTGATGAGGACCAAGGAGACTCCCAATTCCTCAGAGGTTGTCAGCTATGCTGCGTTCACACTCTTCCCCTCTCCAGTACCCCGGTCTCTGTTCGAGCAGGCCCGCCAGGTCCAGACACACTTCAATCTGCTGGTGGACAGAATCAGCCAAGACGCAGAGTTCCTAGAGCAAGCACTAGCCAGCACAATCAATGTAGATGACTTCACAGCGAGactgttcaacatctacagACAGGTTATACAAGAGGGCTGTTCACAGCCTATAATTTTGGGTTTGAACCGCTCAGACTACATGTTTGACCTTGGGAAAGATTCCAAAACATCCTTAAAGCAGATTGAGATTAATACTATAGCTGCCGGTGCCGGAGGGCTTACCTCACGGACTCCAGCTCTTCATAGACACATCCTGAAGGTTGCAGGCCGAGTCGAGGAACAGAAGAATATCCTAGACAATAACCCAACAGCAGGGTCTGCCAAGGCCATCGCCAAATCCTGGGAGCTGTATGGCTCTGAA

Function

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004363 glutathione synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008133 True 621 mRNA 0.50 5 43269017 43270574

Neighbor

gene id symbol gene type direction distance location
AMCG00008134 NA coding downstream 24759 43233233 ~ 43244258 (-)
AMCG00008131 NA coding downstream 58671 43205458 ~ 43210346 (-)
AMCG00008129 NA coding downstream 76521 43177736 ~ 43192496 (-)
AMCG00008126 NA coding downstream 125686 43133750 ~ 43143331 (-)
AMCG00008123 NA coding downstream 137337 43125754 ~ 43131680 (-)
AMCG00008138 NA coding upstream 79525 43350099 ~ 43350744 (-)
AMCG00008137 NA coding upstream 96946 43367520 ~ 43381863 (-)
AMCG00008139 NA coding upstream 126016 43396590 ~ 43408933 (-)
AMCG00008136 trpc4ap,LOC106582896 coding upstream 140635 43411209 ~ 43432086 (-)
AMCG00008135 edem2,LOC107697010 coding upstream 162102 43432676 ~ 43440066 (-)
G28532 NA non-coding downstream 674157 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 768021 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 792027 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 966920 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 978772 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 593033 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 623605 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 725544 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1216636 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1395769 44666343 ~ 44666577 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 148853 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 504363 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 867943 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 1179524 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 1419063 41846933 ~ 41849954 (-)
AMCG00008144 phf20,LOC107727854 other upstream 240186 43510760 ~ 43583413 (-)
G28970 NA other upstream 1147300 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 1878927 45149501 ~ 45228504 (-)
G29301 NA other upstream 2780121 46050695 ~ 46054346 (-)
G29361 NA other upstream 3210372 46480946 ~ 46481898 (-)

Expression


Co-expression Network