AMCG00008137


Basic Information

Item Value
gene id AMCG00008137
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43367520 ~ 43381863 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008137
ACTCCCAATTCCTCAGAGGTTGTCAGCTATGCTCCGTTCACACTCTTCCCCTCTCCAGTACCCCGGTCTCTGTTCGAGCAGGCGCGCCAGGTCCAGACACACTTCAATCTGCTGGTGGACAGAATCAGCCAAGATGCAGAGTTCCTGGAGCAAGCACTAGCCAGCACAATCAAAGTAGATGACTTCACAGCGAGactgttcaacatctacagACAGGTTATACAAGAGGGCTGTTCACAGCCTATAGTTTTGGGTTTGAACCGCTCAGACTACATGCTGGACCTTGGGAAAGATGGGAATACATCCTTAAAGCAGATTGAGATTAACACTATAGCTGCCAGTTTTGGAGGGATAACATCGCGGACTCCAGACGTTCATAGACACATCCTGAAGGTCGCAGGCCGAGTTgaggaacagaagaaaatcCTGGACAATAACCCGGCAGCAGGGTTTGCCGAGGCCATCGCCAAAGCCTGGGAGCTGTATAGCTCTGAACGGGCTGTGGTGATGTTTTTGGTTGAAGATGTCCAACAGAATATATATGACCATCGATTTGTTGAAAATGAGCTCTGGAGCAGAAATATCGCTGTCATACGGAGGAGGTTTGATGATGTGAGCAAAAGGGCGTCCCTGGATCAGAACAAGAGGCTGTTTATagatGGTAAAGAAGTTGCTATTGTGTATTTCCGGAATGGGTACATGCCTCAGAACTACACAGAACAGGGCTGGGAGGCCAGACTGATGATGGAGCGCTCCCGGGCAGTGAAGTGCCCTGACATCAGTACCCACCTGGCCGGGACCAAGAAGGGAGAAGAAGGAGACAGAACAGTAGCTATGGCCATAGCTAACCCAGACCACTTTGTCTTAAAGCcccagagagaaggaggagGTAACAATATCTACGGCGAAGACATCTGCCAGGTGCTGGACAGTGTCAAAGAGAACTTGGAGAGGAGTGCCTACATTCTGATGGACAAAATCCGGCCTCAGCCAGTGAGGAACTACCTGTTGAGATCAGGAAGCCCACTGAAGCTCAGCACCTGCCTGAGTGAGCTGGGCATGTTCGGAGCCTACGTCAGGCAGGGGAAGGGCATGGTGCTGAATGAGTGTACAGGACATCTCCTGAGGACCAAGAGTGCTGAACACTCGGATGGGGGTGTGGCAGCCGGGGTGGCAGTGCTGGACAACCCCCTCCTCATCTAACAACACTGCCTCCCTTGGTGCGGAGGAGTAACTGCACAACTGAACAGCTATACTAATCAAGTACCAGCATCAAATTATGCACCCTGCTTTAACATAGGGGAGAGACTAAATGTAAAattcttttcaaatgtattcctttatttttcttttatatggAATCATGGTTGGAACTGTAAAGtctaaaacctttaaaaaaaaaaaaaatgttttacactgTAAAGCTAATGTGGTCATAATAATGGGCAATTTCTCTACAATGGAATAGCAGGTCCCTGATCTACTGTACCCTGCAAGGCACAGACTTAAATGTGAATTAACCTGCAGAACATCTGAACTAATTCACAATGAAAGAAGTACAGGAACTGTGCCAATATTTAGATGTCAAAGCAAAAGTATTGAAATAAGTGAATGGTGATGCAAGTAGGATTGTAGATGCATTATTTTATCAAAAGGTTTGGGTTCTTTGTACATATAATACAagtatatattgtgacacagtgGAGGGTTGTGTATCATACATGAAAGATGTATATGGGGGTTGCAAGCAGAGAGCTTCACAGGAAACAGAGTTCAAGAAACAGCCGATCTAAGGCTTAGTTTATTTTAGTCTACAAGAGGGGCTTTACAATAGAGAATAttcaaaaaagaaaccaaaatctAATAAAACCTAGCTTCTTTGAGCCTTCACTGCACTTTATTCCAGTCCCTGTCCAAGCCTGTACAGCTAAGCTGTAGaccagttaaaaaacaaaaaaaaacaataacaaaagaagAAAGTTCTTAGCAATTTAGAAGGAGGCAAGCAGGAAaggtttag

Function

GO:

id name namespace
GO:0006750 glutathione biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004363 glutathione synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008137 True 2020 mRNA 0.45 12 43367520 43381863

Neighbor

gene id symbol gene type direction distance location
AMCG00008138 NA coding downstream 16776 43350099 ~ 43350744 (-)
AMCG00008133 NA coding downstream 96946 43269017 ~ 43270574 (-)
AMCG00008134 NA coding downstream 123262 43233233 ~ 43244258 (-)
AMCG00008131 NA coding downstream 157174 43205458 ~ 43210346 (-)
AMCG00008129 NA coding downstream 175024 43177736 ~ 43192496 (-)
AMCG00008139 NA coding upstream 14727 43396590 ~ 43408933 (-)
AMCG00008136 trpc4ap,LOC106582896 coding upstream 29346 43411209 ~ 43432086 (-)
AMCG00008135 edem2,LOC107697010 coding upstream 50813 43432676 ~ 43440066 (-)
AMCG00008147 NA coding upstream 151696 43533559 ~ 43556033 (-)
AMCG00008148 mrgbp,LOC106566471 coding upstream 284705 43666568 ~ 43676377 (-)
G28532 NA non-coding downstream 772660 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 866524 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 890530 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 1065423 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 1077275 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 481744 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 512316 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 614255 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1105347 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1284480 44666343 ~ 44666577 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 247356 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 602866 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 966446 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 1278027 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 1517566 41846933 ~ 41849954 (-)
AMCG00008144 phf20,LOC107727854 other upstream 128897 43510760 ~ 43583413 (-)
G28970 NA other upstream 1036011 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 1767638 45149501 ~ 45228504 (-)
G29301 NA other upstream 2668832 46050695 ~ 46054346 (-)
G29361 NA other upstream 3099083 46480946 ~ 46481898 (-)

Expression


Co-expression Network