AMCG00008139


Basic Information

Item Value
gene id AMCG00008139
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43396590 ~ 43408933 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008139
ATGGCCTTCTTGGCTTTCTCCTCAGCATTGCGACACTCCTGCACagcctcctccacctccccggAGAGCTGGGAAATCTCGTGCTCGGCCAGCTTGCGTGCACGGTCGGTCTGCTCCAGGAGGCTGCGCAGCTCCTCCACCTCTGCTGCCAGGAGGTTGGTCCTACGCTCGATCACCGCCATCTGCTCCTTCAGGGATGCGACTTATGATGAAATCCTTCTCCTCTCTGTGGCTGCCCTCACTGACCTTGACCTGAGCCTGGAGCTGACGGACCAGTTTCTGCATCTCCGCCGCCTGCCTGTTGGCGTGATTCAGCTGGATCTCCATCTCATTCAGGTCGCCCTCCATCTTTTTCTTCAGCCTGACGGCTTCATTGCGAGACTTGGCCTCGGCATCCAGAGTGGCCTGCATGGACTCCACGGCACGTTGGTGGTTACGCCTGCGTTCTTCAGTTTGAAGAGCTCGGTGCTCAGGCTCCGGGACTCCTTCTGGGACGACTCCAGCTCGGACTGCGTCTCCTCATACTTCTGCTTCCACTCGGATAGCACCTTGTCGAAGTTGCGCTGCTTCTTGTCCAGAGCCGCAGCGGCAGAGTTGGCTCTCTCTAGGTCGATCACCAGGTCTTCGATCTCCGTCTGCAGCCGGTGTTTGGTCTTTTCTAGGGAGGAGCACTTGGCGTTCGAAGCCTCCACTGCTTCCTCTGCCTCTTGCAGCCGAGATGCCAGCTTCTTCCTGCAGGCAGGGCATCATTGTCACGATCaTCCTCTGGATGGCATCAGTCTCATATTTGGTCCTCCACTGTGCCACCTCCGCGTTGCCCTTGGAGAGCGCGCGCTGCAACTCGGACTTGGCCTCCTGCTCTTCTTCAAACTGTTCCCTCAGCAGGTCGCAGTCATGACTCTCCTCGTCCAGCTGTTTCTTCAGCTCCTCCACAGCGTGAGTGAAGGACATCTTACTGCGGCTCAGCTGCATGACCAGGGCTTCACGTTCTTCGAGCTTCCTGGACAGCTCACCTGCACAGAGCAACGGAGAGGAGAAATACTGGTCCTCATTATAAGACACTTGCCACTCTCTGCCTGCGCTTTGGCCCGCTGGGACGAGGCTTCGTTAAGCTTCTGCTTGACCCTCTGCAGGCTCTCGATCTGCTCGCTAAGCTCGGCCACGCTGTCGGCGTGCTTTTTGCGCAGGGCGGCGGCCGTGGACTCGTGGTGCAGCATGGCCTCCTCCAGGTCCCGCCGCAGCTTGAGGAACTCCGCCTCACGCTTCTTGTTCATCTCGATCTGGGCCGTGGTGGCCCCGCCAGCCTCCTCCAGACGCTCACTCAACTCCTCCAGCTCCCGGGCCACCTCCGAGCGCTGCTTCTCCACCTTGGCCCGCACGGCCCGCTCAGCCTCCAACTCCTCCTCCAACTCCTCGATTCGTGCCTGGTTTTTGTTGGGAGTGGTGGTGGAGGGAGATCATTATATTTGtttctcctccagctccttccTCTTGGCCTCAGACTTCTCCAGGGCCTCCTTCAGTTTCAGGAACTCCTCCTTCATGGTGGCCATCTCCTTCTCTGTGGCTGCACTCCTCAAGAGTGGCTTGATCTTGAAGAACAGTTTCATCCAAGGCCAGTGCTTCACAGCATTGAAGGCCCGGATATTCCACTGGATAATCATGAGAGCCTCCCTGGGACAGGAAAGTTGTCAGATACTCACAAAACGAGAGGAGTTGTCATTCCTCAAGGTTTTGGCGTTACCAAAGGCTTCCATGGCAGGGTTAGCCTCTATGATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008139 True 1782 mRNA 0.58 10 43396590 43408933

Neighbor

gene id symbol gene type direction distance location
AMCG00008137 NA coding downstream 14727 43367520 ~ 43381863 (-)
AMCG00008138 NA coding downstream 45846 43350099 ~ 43350744 (-)
AMCG00008133 NA coding downstream 126016 43269017 ~ 43270574 (-)
AMCG00008134 NA coding downstream 152332 43233233 ~ 43244258 (-)
AMCG00008131 NA coding downstream 186244 43205458 ~ 43210346 (-)
AMCG00008136 trpc4ap,LOC106582896 coding upstream 2276 43411209 ~ 43432086 (-)
AMCG00008135 edem2,LOC107697010 coding upstream 23743 43432676 ~ 43440066 (-)
AMCG00008147 NA coding upstream 124626 43533559 ~ 43556033 (-)
AMCG00008148 mrgbp,LOC106566471 coding upstream 257635 43666568 ~ 43676377 (-)
AMCG00008152 ncoa3,LOC107090280 coding upstream 488283 43897216 ~ 43922028 (-)
G28532 NA non-coding downstream 801730 42522805 ~ 42594860 (-)
G28512 NA non-coding downstream 895594 42500677 ~ 42500996 (-)
G28509 NA non-coding downstream 919600 42475720 ~ 42476990 (-)
G28456 NA non-coding downstream 1094493 42301277 ~ 42302097 (-)
G28446 NA non-coding downstream 1106345 42283959 ~ 42290245 (-)
G28900 NA non-coding upstream 454674 43863607 ~ 43893808 (-)
G28907 NA non-coding upstream 485246 43894179 ~ 43895951 (-)
G28914 NA non-coding upstream 587185 43996118 ~ 44000866 (-)
G28973 NA non-coding upstream 1078277 44487210 ~ 44487419 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding upstream 1257410 44666343 ~ 44666577 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 276426 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 631936 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 995516 42359900 ~ 42401074 (-)
AMCG00008095 NA other downstream 1307097 42083474 ~ 42089493 (-)
AMCG00008085 NA other downstream 1546636 41846933 ~ 41849954 (-)
AMCG00008144 phf20,LOC107727854 other upstream 101827 43510760 ~ 43583413 (-)
G28970 NA other upstream 1008941 44417874 ~ 44418196 (-)
AMCG00008192 NA other upstream 1740568 45149501 ~ 45228504 (-)
G29301 NA other upstream 2641762 46050695 ~ 46054346 (-)
G29361 NA other upstream 3072013 46480946 ~ 46481898 (-)

Expression


Co-expression Network