AMCG00008145 (id1)


Basic Information

Item Value
gene id AMCG00008145
gene name id1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 43662564 ~ 43663708 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008145
atgaaagtgGTCGGATCTACCTGCGCCCTGAAGAACAAGGTTGGCAGCGAGGACATGGTGCGCTGTCTGTCCGAGCAGAGCCTCGCCATCTCCAAGTGCAAGATCCCCTTGCTGGACGAGCAGATGAACGTCTTCCTCTACGACATGAACAGCTGCTACAGCAAGCTGAAGGAGCTGGTGCCCACGCTGCCGCCCAACAAGAAGGCGAGCAAGATGGAGATCCTGCAGCACGTCATTGACTATATCTGGGACCTGCAGCTGGAGCTCGACTCCCCGGGCATGAACCGTCAGCAGGCGGCCAACGGATCGCCCCTCACCCGGTCACCGCTGACGACGCTCAACGCCGAGCTGGCCAGCATCGCTGTCGAGaATGGATGCTCGGATGACAGGATCCTGTGTCGCTGATGTGATCTGTCTCTGGAAGCTGTAACCCATCTTGGACAAAACGGGAACAGTAATGAGAACAAACAAGGTGCCTATGAGTGACGTTTCATCACTTCGTTAACCTTGACCTAGTAGGGAAGTAGTAAACCTCCCATAGTAGAAGAAAAAGACTTTAAAAAGCGACATGCAGGGGGCTGTCCGGCGATCCGGCTCCCCTCCCTCGGAGGACCCGGGCGGGCGCAGCTTCCACCGGCCGCACGACCTGGCGGCGCCCCGTGTGCAGCATCGCAAGGACCGCTCTTGACTGCTCGCCATCCGACAGATTCACTGGAGAGACATGGTTTTCtccttttgtctttctttatcttttttgaTCTGTAAATTTTTACACGTaggagagagattttttttttttctatattttgtaaaaaatgttaACTTCTCAGATTGCTgagttattattgtattgtatattacaaTGCTATGTGaaagtttatattgtttttttacaatgtacctaaaatggtgtttttattaaaacaagaaaagtattttgaaa

Function

symbol description
id1 Predicted to enable protein dimerization activity. Acts upstream of or within negative regulation of neurogenesis and regulation of neuron differentiation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including brain; ectoderm; germ ring; mesoderm; and pleuroperitoneal region. Orthologous to human ID1 (inhibitor of DNA binding 1, HLH protein).

NR:

description
PREDICTED: DNA-binding protein inhibitor ID-1

GO: NA

KEGG:

id description
K04680 ID1; DNA-binding protein inhibitor ID1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008145 True 943 mRNA 0.50 2 43662564 43663708

Neighbor

gene id symbol gene type direction distance location
AMCG00008146 hm13,LOC106572089,LOC106566469 coding upstream 41421 43605257 ~ 43621143 (+)
AMCG00008140 NA coding upstream 155511 43497288 ~ 43507053 (+)
AMCG00008142 ndrg3,LOC107705728,LOC107696989,LOC107693556,LOC108429301,LOC103029397 coding upstream 168362 43471650 ~ 43494202 (+)
AMCG00008143 NA coding upstream 251833 43392104 ~ 43410731 (+)
AMCG00008141 NA coding upstream 324526 43336941 ~ 43338038 (+)
AMCG00008150 eef1a2,LOC108429306,LOC107724190,LOC107551525,LOC107705720 coding downstream 14407 43678115 ~ 43695564 (+)
AMCG00008149 LOC106572085,LOC107705722 coding downstream 190317 43854025 ~ 43893098 (+)
AMCG00008154 NA coding downstream 312593 43976301 ~ 43999833 (+)
AMCG00008155 NA coding downstream 338026 44001734 ~ 44034340 (+)
AMCG00008156 NA coding downstream 370678 44034386 ~ 44036127 (+)
G28678 NA non-coding upstream 461361 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 541783 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 1040407 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 1075896 42584232 ~ 42586668 (+)
G28511 NA non-coding upstream 1161583 42500674 ~ 42500981 (+)
G28862 NA non-coding downstream 230401 43894109 ~ 43895951 (+)
G28931 col9a3,LOC106571930 non-coding downstream 390257 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 1027833 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 1104969 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 1132216 44795924 ~ 44798463 (+)
AMCG00008132 NA other upstream 357034 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 506492 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 554322 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 1225336 42413632 ~ 42437228 (+)
G28395 NA other upstream 1669187 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 1359440 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 1483689 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 1676866 45340574 ~ 45343914 (+)
G29183 NA other downstream 1776805 45440513 ~ 45441064 (+)
G29353 NA other downstream 2604183 46267891 ~ 46268327 (+)

Expression


Co-expression Network