AMCG00008155


Basic Information

Item Value
gene id AMCG00008155
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44001734 ~ 44034340 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008155
CATTTTGACCCACCGAGAGAAAATGGAGGACTGAGCGGAGAGCGTCCTAGATTGCGAGACGGCGACGAACATAATAATCCCATCAGAAGAAGGAACAGACTAGTGATGAGTGATGATCTGGACCTTCTGAACGAGGAGATCGAGCGGTTATCTCGTCAGACCAGAGAGGGAGGTTGCTCCCCGACTCTTCCCTCAGTGTCCAGTCTGTCCCCCAGGGACTTGCTGCACGTTTGCCGGATCTCGGAAGAGCACTCTCAGatATTCTGTTTGAAAATAGTGTCATCTATGGAGGACATTGTGAGTTCTGAGCTCTCTCTAAACCCTGAGTCAGAACAGAGCCAGGATCCTATGGATATCAGCTCTCAAGTTTCAACCACAGTAGATGAAAAAGAAGAGCAAAGCAATGAAGACAGTGAAAAGCTAGAGGAGGCAGGGAAGTCTGTAAAACCCACTAGCAAGGAGTTTCGGAAGACGTGGGGTTTCCGGAGGACCACGATCGCAAAGAGAGAGATGCCAGGAGACGTCGATAGCCAGGACTCTGCAAACGCACCGTTGCGCCGCAGTGGGCGCCAGGCGAAGAGGACGGACAAGATGGAGGAGTTCCTGTCGACGGCCAAACGTGGGCGAGGGGGCCGACGCAGCGCCCCAGCCAACCTGGAGAGCTCAGACCCTCCCTCCCAAACCCCTACTGACGTAGAGACAGCCTCCGAGGCCAGCTTTGACGGTACTTCAGAGACCAAGGCAGGAAGTGAGATCACTGACCCCAAGGCAGAGTCCCCAGAGAGAGAACAGGGTGACAAAAAGAAAGCAGAGGGCTCTGGCATGGAGGAGGGCAGCACAGATGAGGATGAAGACAGTGATGAGCTGACTCTAAAGGAGCTGCAGAACCAGTTGAGGAAGAAGAGAGTAGAAGGCGAGACGGAGACAGCGGCAGAGCCTGATGCCCAACCTGAAGCAGAaccggaggaggaggaggaggaggaggaggaggaggaggctgaggCCGTGGCTGTGAAAGAGGAGGAAAGCCCTGAAAAACCCACAGAGGAACAGAGTGGCCGCCGGCTCTCGAGTAGCCCTggcaggggaggggggaaggAAACCACACTGGTCAAGAAGGATATCAAGCCCAAATCAGTGATGAAAACTGGCAAAGACCCAGGGGAAAAGGGACCAGCTTCCAGTAAATCTGAATGCGAGGGCTATGATCcaaatgcactgtattgtatCTGTCGGCAAAAGCACAACAACAGGTTCATGATCTGTTGTGACCGCTGCGAGGAGTGGTTTCACGGGGACTGTGTGGGCATCACAGAGGCTCGTGGCCGTCTGCTGGAGAGGAATGGCGAGGATTACATCTGCCCCAACTGCACCACGCAACAGGGCCAGCCCTGCGGTGGCCCGGACAGTGAGGGGGACAAGCTAGAGGCAACAAAGTCTGGCCAGTCCTCCGGACAGAGCGCCCCGTCTGCCGAGAAGCCTAACGAAGATCAGGGAATCAAAGGCAGAATCGAGAAAGCCACCAATCCCAgtgggaaaaagaaaataaaaatattccaGCCGGCTGTCGAGGCCCGTGAGCTTCCCAAGTGCATCGGCCCAGGCTGTGCCAACCACGCCCTGCCCGACTCGGTGTACTGCGGTAACGATTGCATTCTCAGACACGCCGCTGCTGCAATGAAATCTCTTTCTGACGTCAAAGAGCCCAAACCTAAAGAAAAACCTAAACCTAAAGCACAGAAAAAACCTCCTTCAAAAACCCAAACCAAGGGTCTGAAGAGACTCCTCCCAGAGCGCAAGGCTGTGAAGAGGACTGCAGAGGCGGCTATCAAGGCTGAGGAGGACTCGTCCGGCAGCGAGACGGAGCAAGCGGAAGAGGAGCCAGTTGTACCGTCCTGGTCCAGCGATCATAATTACAATGCAGTAAAGCCAGAAAAGACTGCAGCCATTTCATCATCTGTGTTTTACAAAGCGTCTTCAaaggagactgaagagagcagCGAGAAGAAGAAGGAGTCCAGTGTCGTCACACGCAAGCAGTCCCCGCCTGCTGCCACATCCCCCAAAGGGAATAAGAAATCCTCTTCTTCTGGTGGGCCATCGGCCAAAGGCAAGAAGCCTCTGCCTCCATCTGGGAGTACTAGTGGAACCTCCAAAAAACTCCTGCAACCTTCAAACAGCAACACCAACTCGAAGAAAGCCAGTCAGCCTGCGTCCAGACACCATTCCACAGGTGCCCTGAGAGTCGCCAAGACCACCTACACTATCCCAAAGAAGCAGCCTGctcagcaacagcaacaacagcagcaggcCCCACCACCACCTGCTTCCAGCCCTGCTGCTCCAGTCAAATCCTCTGCTGGATACTCGGCGCCCACAGGCCCTCCTGCCTCCTCCAGGCCTCCTCCACCCAGCACCCCCCAGCCTCAGCCCAACAACCAGATCAGACAGAATATCCGTCGCTCGCTCACCGAGATTCTGTATAAGAGGGTGAGTGACAGTGATGACCTGGAGATCTCCGAGAGTGAAGTGGGCAAGATAGCATTTAACATCGAGAAGGAAATGTTCAATCTGTTCCTCAACACGGACAACAAATACAAGAATAAGTACAGAACCATCATGTTTAACCTGAAAGATCCTAAAAATAAGGGGCTTTTTTATCGTGTGATCGGGAGTGAGCTTAGTCCCTTTAAACTAGTGAGGCTGAGCCCAGAGGAACTCCTGTCCAAAGAAATATCTGAGtggagacagaaagagacatcTGAGGTTCTAGAACCCAACCAGAAGTCTCAGCGAGAGGCACAAAAGTTCGGCCTGAAACAGGAGAACGTGCCCGATGTGGACATGGAGGAGTCTCCTCCCATGTCTGATGGAGACGTATGTATTAATGCCACCTCCCCACCGCCCCGCATGGCTTCTGCAGCAgaacCAGAGGAACCTCGTCCTGCCCCTGCTAAGAGTAGCCTCCCAGTCCCTGATATCTTTAGCAGCATGTTGAAGGACACGACCAGTGAGCACCGTGCTCACCTCTTTGACCTCAACTGCAAGATCTGCACAGgCCAGATGTCCGCTGAAGAGGAGCTGGTGCCGAAGAAACCCAAAATCTCTGCGCCATCTGCAGTGAAAAAAGCAGAACCCAAAGTGAAGCAAGAGCCGAGACCCTCGAAGCTGGGCATGGCTGGGGATGGGGCCACGGAATCCACTCTGGCCAACGCTTACTGCGAGCCGCCCCCTGGAAACGAAACTCCCATCATTGACTCCCCAGCTTCACCCGAAGAAACCAGCAACCCAGTGACTTCTTCCTCCCAGTCCTTCACTCCCATCCCCATCCCTGCCGTTTCGTCTGTGACAATAACACGCCGAGACCCCCGCACTGCTAGTTACCGTCCTGCTGTCACCGTGACCCCAGCATCCACCCTGGCATCCACAGTGGCCCCACCACTTAGTGCGGACACTGTCTCTACGACTGTTGTAGAACCCACCATTGAAGTTACCAAGCCTGCTATGCCTCCACCACCCCCGGCCCCCAGGTCCATCTTAATGAAACCGGTTTCTTCTCCAGACACCAGATACTTCGCCACTTCTTCATCCACTACCAGCATTGCAGAGTCTCGCTCTCCTCAGGATGGAGAAACCACTGTGTTCCTTGCCAAGCAGGAGATCCTATGGAAAGGCTTTATCAACATGCACACCGTGGCAAAGTTTGTCACCAAGGCCTATCTAGTTTCCGGGTCCTTTGAATATCTCTCGGAGGATTTACCCGATACAATCCACATTGGTGGACGGATTTCCCCACACACTGTCTGGGATTATGTGGGGAAGCTGAAAACATCTCTCTCCAAGgagctgtgCTTGATCCGCTTCCACCCGGCGACCGAGGAAGAAGAAGTGGCCTatatctctctcttctcttaTTTCAGCAGCCGTGGGAGGTTTGGAGTGGTGGCCAACAATAACCGTCGCATTAAAGACCTCTATCTTATCCCACTGAGTGCCAAGGACCCCATCCCTTCAAAACTCTTACCCTTTGAAGGGCCAGGATTGGAGTCTTCTCGTCCTAATCTTCTCCTTGGACTGGTAATTTGCCAGAAACTCAAGCGTTCTGGAGCCCCATCTGAGGGAGATAAGGGATATGAAGAGAAAAAATCGAAAGTTCAGATCCGAGATGAAGACGATGCTCCTCTTTCAAAACACTCCGTGCTTCCCAAGACTGAAATTAAACAAGAGAGAGCCTCTCTTTATAATCCAGAGATTCCCATGAGCACCACGCCTCCTGGATCTCCACCGTCCGTTACTTCCTCAGAATCCTCGTCTAACTCGCTCACAACCTCTTCAGTGCTGTCTTTGCTGTCCTCTGTGAAAGCTGGTACCACCGTGAGTGCTGGTGTGGATTCTTCATCCTCAACTTCCAGCAATGCTGCTTCTGGGGTAGTCAGCTCCTCTCCTCTGCAGCATATCCTTAAAACTCTGTTTGGCAAAAAGAAACCAGATTCTACTGACTCCTCTCAGTCCCCATCTGACCAGAGTCCTCTGGAACACACGGTGCCTTCAGCTCCTCTTCTTGATCCCATTGTCCAGCAGTTTGGCCAGATCTCCAAGGATAAAATCATAGAGGAAGATGAGGATGACAGACCCTATGATCCAGAGGAAGAGTACGATCCAGGAATGGGCTATGGTTTGGAGACTCCCATGGACACAGACAAAATGTTCGAAACCAATAAGGTGTGTGAGGTTGCTGACACAGATGATGTAGCCTATGATCCCGAAGATGAAACTATCTTTGAGGAAGCAAAAGTCATTGTCAGTGATTTCCCAAGCCGCTCCTTGGAAACCAAGACCAAACAGTCATCTGATGGTGAAACTGTGGCAGCTGGGGGTGAATCGTCTTCACTGACTGAACAACAAAAGATGCTGGAAGAGCTGAATAAGCAGATTGAAGAGCAAAAAAGACAACTGGAGGAGCAAGAGGAAGCCCTTAGGCAGCAGAGAGCAGCTGTAGGCGTGTCCATGGCACACTTCTCTGTATCTGATGCCTTGCTGTCACCGCCTCCTAAATCATTACTGGCAAATACCCAGTTGCTGCAATTGGGCAAAAAAGTGGAGGAATTAGTTTCAAAAACTCCAGCTGGCCAGGTCATCAATCAGAAAAGGGATCCAAGACAGAGCAGGGATCCCCGACAGGCAGCAGCAAATAGGAGGCTTACATCAGACTCGGAAAAAGAAGAGACTGCTGAAGCTTCTGCTGAAGTCTCATCATCCTCATTGCAGCCTTCTGAGTCACAGACTCAAACAGTCCCTTATATTGAGCCTGAGAGCACAGAAGTGGTCATTCCACTGTTGGGGGAGAAGATCGATCCGGATTTGGAAGACAACACACAGCCCGAGACTTCTGCTGAACCAACAGGGAAATTTACAGGAGACCGGAAGGCTGAGATAGTAAGCGACCCTTTTAAAGCTTGGCCAAATTCTGCAAGTATTTTAAAACCCGAGGACATTAAGAGTcttgaactgacacacaatgtCTTACTGCCAAACCCGACGCAAGCTCAGGTTTACCCACCATCTACTGTTAATGTTCCTCCTGTAACGTCCACAATGCCCATCCTCTCCCAGGACattacacacaacaacaacaactcaaTGGCAAACACTCAGACTCCTCTCATGCCGCAGATTGGAATGCCCAATCCTGACTTCAGGAACCCCCAGGAATTGCAGCAATCTATTCCTTACCAGCCCATAACTGGTCCTCCACAACTGCAGGGTGAGGGTGACCAATCCCAGTTCAGAGATCACATGATTTCCTATCCTCCATTCCAGGATCAGTGGGGTGGCTCTCCACAACAGTTTGATGGCCCCCGAGGACCACCACCGCCACACATGATGGGACTAAGAGGTCCTCCTCCCTTTCAGCCAATGGCACAAAGAGGTCCACCCCCACAAATGTTTGAAGGACCCAGAGGTCCCATGCCTCCCCAGCACATGGGACAGAGAGGTCCTGTGCCTGGACAGTTCATTGAAGGACATGGACCACCTCGTCCTTTTGAAGGACAAAATGATCCCCATCAGCCTCGATTTAGTGGTCCGCCTCCTCCCCTACATTTTTCTGGACCCAGAGGTCCCCTACCACCCTTTATGGGTCCACCACCTGGCCAGTTTGATAACAGGGGGCCCCCTCCTTCCCATTTTCAAGGGCCAAGAGGGCCTCTTGCTCCCCACCAGTTTGTGGAACATGGGCCCCAAAAGCCTTTGTTAGAAACGCCAAGAGGGCCTGAAGAACAGCATTTGATGGGTCAAGGGGGAGTCGACCACCACCTGCAGGAGGAGATATGGGAGGCCAGCGTTTTGCCCCAACAAACCAGTATGGTGGCCCAAGGGCTCCTTCCCCCCATCTTCAGCAGAACCAGAATGTGCCTTCACCACAGCACAGAGGGAGTTTTGAAGAGCACAGAGGCCCTCATCCTCCTCAATTTCAGGGTCAGAGAGGACCCCAACCCTCACCATATGGAGGAGGACCTAGAGGCCCCACACCTGCTCAGTTTCCAGACAATGGAGGACAACCCCGATTCCATTTTGAAAGTCCACATCATCCACCAGATGGTAGGCCAATGCGCCACCCTCGTCCTTTACTTCCAACACCTACTGAGGCCCCTATTCAAATACCAAACCGCTCGGGACAAAGTCCTGATTCCCACCAAGGTGAACATTGGCAGTCTTCTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008155 True 6723 mRNA 0.52 20 44001734 44034340

Neighbor

gene id symbol gene type direction distance location
AMCG00008154 NA coding upstream 1901 43976301 ~ 43999833 (+)
AMCG00008149 LOC106572085,LOC107705722 coding upstream 108636 43854025 ~ 43893098 (+)
AMCG00008150 eef1a2,LOC108429306,LOC107724190,LOC107551525,LOC107705720 coding upstream 306170 43678115 ~ 43695564 (+)
AMCG00008145 id1 coding upstream 338026 43662564 ~ 43663708 (+)
AMCG00008146 hm13,LOC106572089,LOC106566469 coding upstream 380591 43605257 ~ 43621143 (+)
AMCG00008156 NA coding downstream 46 44034386 ~ 44036127 (+)
AMCG00008153 NA coding downstream 6438 44040778 ~ 44044810 (+)
AMCG00008157 NA coding downstream 72115 44106455 ~ 44131719 (+)
AMCG00008160 NA coding downstream 225635 44259975 ~ 44268323 (+)
AMCG00008167 NA coding downstream 543032 44577372 ~ 44653905 (+)
G28862 NA non-coding upstream 105783 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 800531 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 880953 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 1379577 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 1415066 42584232 ~ 42586668 (+)
G28931 col9a3,LOC106571930 non-coding downstream 19625 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 657201 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 734337 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 761584 44795924 ~ 44798463 (+)
G29148 NA non-coding downstream 1319376 45353716 ~ 45354079 (+)
AMCG00008132 NA other upstream 696204 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 845662 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 893492 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 1564506 42413632 ~ 42437228 (+)
G28395 NA other upstream 2008357 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 988808 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 1113057 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 1306234 45340574 ~ 45343914 (+)
G29183 NA other downstream 1406173 45440513 ~ 45441064 (+)
G29353 NA other downstream 2233551 46267891 ~ 46268327 (+)

Expression


Co-expression Network